RNA–Protein interactions for RNA: ENST00000450169.6

LSM5-208, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM5, Length 2,258 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-208ENST00000450169 SLC26A10Q8NG04 563 aa7.63□□□□□ -1.19
LSM5-208ENST00000450169 FNDC9Q8TBE3 224 aa7.63□□□□□ -1.19
LSM5-208ENST00000450169 SOCS4Q8WXH5 440 aa7.63□□□□□ -1.19
LSM5-208ENST00000450169 SLC25A44Q96H78 314 aaPredicted RBP7.63□□□□□ -1.19
LSM5-208ENST00000450169 CABLES2Q9BTV7 478 aa7.63□□□□□ -1.19
LSM5-208ENST00000450169 GSX1Q9H4S2 264 aaPredicted RBP7.63□□□□□ -1.19
LSM5-208ENST00000450169 SERINC1Q9NRX5 453 aa7.63□□□□□ -1.19
LSM5-208ENST00000450169 LANCL2Q9NS86 450 aa7.63□□□□□ -1.19
LSM5-208ENST00000450169 FKBP11Q9NYL4 201 aa7.63□□□□□ -1.19
LSM5-208ENST00000450169 TUBD1Q9UJT1 453 aa7.63□□□□□ -1.19
LSM5-208ENST00000450169 SLC22A13Q9Y226 551 aa7.63□□□□□ -1.19
LSM5-208ENST00000450169 C20orf202A1L168 122 aa7.63□□□□□ -1.19
LSM5-208ENST00000450169 MEGF11A6BM72 1044 aa7.63□□□□□ -1.19
LSM5-208ENST00000450169 NXPH2O95156 264 aa7.63□□□□□ -1.19
LSM5-208ENST00000450169 CYB5R3P00387 301 aaPredicted RBP7.63□□□□□ -1.19
LSM5-208ENST00000450169 OPN1MWP04001 364 aa7.63□□□□□ -1.19
LSM5-208ENST00000450169 OPN1MW2P0DN77 364 aa7.63□□□□□ -1.19
LSM5-208ENST00000450169 OPN1MW3P0DN78 364 aa7.63□□□□□ -1.19
LSM5-208ENST00000450169 ERGP11308 486 aa7.63□□□□□ -1.19
LSM5-208ENST00000450169 AKR1A1P14550 325 aa7.63□□□□□ -1.19
LSM5-208ENST00000450169 IGFBP3P17936 291 aaPredicted RBP7.63□□□□□ -1.19
LSM5-208ENST00000450169 ALDH3B1P43353 468 aa7.63□□□□□ -1.19
LSM5-208ENST00000450169 PDLIM4P50479 330 aa7.63□□□□□ -1.19
LSM5-208ENST00000450169 ELLP55199 621 aaPredicted RBP7.63□□□□□ -1.19
LSM5-208ENST00000450169 CSNK1G2P78368 415 aa7.63□□□□□ -1.19
LSM5-208ENST00000450169 SPOCK1Q08629 439 aa7.63□□□□□ -1.19
LSM5-208ENST00000450169 ICAM4Q14773 271 aa7.63□□□□□ -1.19
LSM5-208ENST00000450169 VAX1Q5SQQ9 334 aa7.63□□□□□ -1.19
LSM5-208ENST00000450169 COL5A1-AS1Q5SY13 56 aa7.63□□□□□ -1.19
LSM5-208ENST00000450169 FDX2Q6P4F2 183 aa7.63□□□□□ -1.19
LSM5-208ENST00000450169 ABHD17CQ6PCB6 329 aa7.63□□□□□ -1.19
LSM5-208ENST00000450169 PLXDC2Q6UX71 529 aa7.63□□□□□ -1.19
LSM5-208ENST00000450169 CXCL17Q6UXB2 119 aa7.63□□□□□ -1.19
LSM5-208ENST00000450169 LINC01555Q8NAE3 123 aa7.63□□□□□ -1.19
LSM5-208ENST00000450169 OR8G5Q8NG78 346 aa7.63□□□□□ -1.19
LSM5-208ENST00000450169 OR4D6Q8NGJ1 314 aa7.63□□□□□ -1.19
LSM5-208ENST00000450169 ASB5Q8WWX0 329 aa7.63□□□□□ -1.19
LSM5-208ENST00000450169 ACY3Q96HD9 319 aa7.63□□□□□ -1.19
LSM5-208ENST00000450169 ANGPTL4Q9BY76 406 aa7.63□□□□□ -1.19
LSM5-208ENST00000450169 OR2J1Q9GZK6 312 aa7.63□□□□□ -1.19
LSM5-208ENST00000450169 PCBD2Q9H0N5 130 aa7.63□□□□□ -1.19
LSM5-208ENST00000450169 SRD5A3Q9H8P0 318 aa7.63□□□□□ -1.19
LSM5-208ENST00000450169 SLC25A13Q9UJS0 675 aa7.63□□□□□ -1.19
LSM5-208ENST00000450169 HSF4Q9ULV5 492 aa7.63□□□□□ -1.19
LSM5-208ENST00000450169 HS3ST2Q9Y278 367 aa7.63□□□□□ -1.19
LSM5-208ENST00000450169 RCL1Q9Y2P8 373 aaKnown RBP7.63□□□□□ -1.19
LSM5-208ENST00000450169 CHTOPQ9Y3Y2 248 aaKnown RBP7.63□□□□□ -1.19
LSM5-208ENST00000450169 TMEM14AQ9Y6G1 99 aa7.63□□□□□ -1.19
LSM5-208ENST00000450169 EML5Q05BV3 1969 aa7.63□□□□□ -1.19
LSM5-208ENST00000450169 SPTBP11277 2137 aa7.63□□□□□ -1.19
LSM5-208ENST00000450169 YLPM1P49750 1951 aaKnown RBP7.62□□□□□ -1.19
LSM5-208ENST00000450169 LAMA3Q16787 3333 aa7.62□□□□□ -1.19
LSM5-208ENST00000450169 A0A1B0GU03 582 aa7.62□□□□□ -1.19
LSM5-208ENST00000450169 E5RGE8 158 aa7.62□□□□□ -1.19
LSM5-208ENST00000450169 LCATP04180 440 aa7.62□□□□□ -1.19
LSM5-208ENST00000450169 CYBAP13498 195 aa7.62□□□□□ -1.19
LSM5-208ENST00000450169 OR10J1P30954 320 aa7.62□□□□□ -1.19
LSM5-208ENST00000450169 NOVA1P51513 510 aaKnown RBP7.62□□□□□ -1.19
LSM5-208ENST00000450169 VAMP2P63027 116 aa7.62□□□□□ -1.19
LSM5-208ENST00000450169 FOXF1Q12946 379 aa7.62□□□□□ -1.19
LSM5-208ENST00000450169 FZD2Q14332 565 aa7.62□□□□□ -1.19
LSM5-208ENST00000450169 ARHGAP19Q14CB8 494 aa7.62□□□□□ -1.19
LSM5-208ENST00000450169 C1orf100Q5SVJ3 147 aa7.62□□□□□ -1.19
LSM5-208ENST00000450169 METRNLQ641Q3 311 aa7.62□□□□□ -1.19
LSM5-208ENST00000450169 ZNF880Q6PDB4 577 aa7.62□□□□□ -1.19
LSM5-208ENST00000450169 SPSB3Q6PJ21 355 aa7.62□□□□□ -1.19
LSM5-208ENST00000450169 NUFIP2Q7Z417 695 aaKnown RBP7.62□□□□□ -1.19
LSM5-208ENST00000450169 LRRC25Q8N386 305 aaPredicted RBP7.62□□□□□ -1.19
LSM5-208ENST00000450169 NKAIN3Q8N8D7 197 aa7.62□□□□□ -1.19
LSM5-208ENST00000450169 KTI12Q96EK9 354 aaPredicted RBP7.62□□□□□ -1.19
LSM5-208ENST00000450169 DNAJA3Q96EY1 480 aa7.62□□□□□ -1.19
LSM5-208ENST00000450169 PLPPR2Q96GM1 343 aa7.62□□□□□ -1.19
LSM5-208ENST00000450169 HHIPL1Q96JK4 782 aa7.62□□□□□ -1.19
LSM5-208ENST00000450169 AMELYQ99218 206 aa7.62□□□□□ -1.19
LSM5-208ENST00000450169 LPAR4Q99677 370 aa7.62□□□□□ -1.19
LSM5-208ENST00000450169 TRIM2Q9C040 744 aa7.62□□□□□ -1.19
LSM5-208ENST00000450169 ELOVL3Q9HB03 270 aa7.62□□□□□ -1.19
LSM5-208ENST00000450169 C1orf123Q9NWV4 160 aa7.62□□□□□ -1.19
LSM5-208ENST00000450169 FOXJ2Q9P0K8 574 aa7.62□□□□□ -1.19
LSM5-208ENST00000450169 ZBTB32Q9Y2Y4 487 aaPredicted RBP7.62□□□□□ -1.19
LSM5-208ENST00000450169 NSG2Q9Y328 171 aa7.62□□□□□ -1.19
LSM5-208ENST00000450169 HEATR5AQ86XA9 2040 aa7.62□□□□□ -1.19
LSM5-208ENST00000450169 ETV2O00321 342 aaPredicted RBP7.62□□□□□ -1.19
LSM5-208ENST00000450169 SOD2P04179 222 aa7.62□□□□□ -1.19
LSM5-208ENST00000450169 HMGA1P17096 107 aaKnown RBP7.62□□□□□ -1.19
LSM5-208ENST00000450169 GLRA1P23415 457 aa7.62□□□□□ -1.19
LSM5-208ENST00000450169 CEACAM8P31997 349 aaPredicted RBP7.62□□□□□ -1.19
LSM5-208ENST00000450169 RBMXP38159 391 aaKnown RBP7.62□□□□□ -1.19
LSM5-208ENST00000450169 FLT3LGP49771 235 aa7.62□□□□□ -1.19
LSM5-208ENST00000450169 RAB7AP51149 207 aa7.62□□□□□ -1.19
LSM5-208ENST00000450169 IDH3GP51553 393 aaPredicted RBP7.62□□□□□ -1.19
LSM5-208ENST00000450169 PNRC1Q12796 327 aaPredicted RBP7.62□□□□□ -1.19
LSM5-208ENST00000450169 TAF9Q16594 264 aa7.62□□□□□ -1.19
LSM5-208ENST00000450169 TMEM176BQ3YBM2 270 aaPredicted RBP7.62□□□□□ -1.19
LSM5-208ENST00000450169 ZNF506Q5JVG8 444 aa7.62□□□□□ -1.19
LSM5-208ENST00000450169 LINC00114Q6XXX2 140 aa7.62□□□□□ -1.19
LSM5-208ENST00000450169 ZNF100Q8IYN0 542 aa7.62□□□□□ -1.19
LSM5-208ENST00000450169 OR2I1PQ8NGU4 316 aa7.62□□□□□ -1.19
LSM5-208ENST00000450169 STT3BQ8TCJ2 826 aa7.62□□□□□ -1.19
LSM5-208ENST00000450169 HAS2Q92819 552 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms