RNA–Protein interactions for RNA: ENST00000449744.1

CHD3-205, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 880 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-205ENST00000449744 IL4I1Q96RQ9 567 aa12.64□□□□□ -0.39
CHD3-205ENST00000449744 GABARAPL1Q9H0R8 117 aa12.64□□□□□ -0.39
CHD3-205ENST00000449744 GPR84Q9NQS5 396 aa12.64□□□□□ -0.39
CHD3-205ENST00000449744 SNTG1Q9NSN8 517 aa12.64□□□□□ -0.39
CHD3-205ENST00000449744 RPUSD1Q9UJJ7 312 aaKnown RBP12.64□□□□□ -0.39
CHD3-205ENST00000449744 CENPVL3A0A0U1RRI6 287 aa12.63□□□□□ -0.39
CHD3-205ENST00000449744 A0A1B0GW55 424 aa12.63□□□□□ -0.39
CHD3-205ENST00000449744 PRR32B1ATL7 298 aa12.63□□□□□ -0.39
CHD3-205ENST00000449744 ZNF732B4DXR9 585 aa12.63□□□□□ -0.39
CHD3-205ENST00000449744 LOC110117498-PIK3R3F6TDL0 507 aa12.63□□□□□ -0.39
CHD3-205ENST00000449744 GPR37O15354 613 aa12.63□□□□□ -0.39
CHD3-205ENST00000449744 HOXA3O43365 443 aaPredicted RBP12.63□□□□□ -0.39
CHD3-205ENST00000449744 DUX4L2P0CJ85 424 aa12.63□□□□□ -0.39
CHD3-205ENST00000449744 DUX4L3P0CJ86 424 aa12.63□□□□□ -0.39
CHD3-205ENST00000449744 DUX4L4P0CJ87 422 aa12.63□□□□□ -0.39
CHD3-205ENST00000449744 DUX4L5P0CJ88 424 aa12.63□□□□□ -0.39
CHD3-205ENST00000449744 DUX4L6P0CJ89 424 aa12.63□□□□□ -0.39
CHD3-205ENST00000449744 DUX4L7P0CJ90 424 aa12.63□□□□□ -0.39
CHD3-205ENST00000449744 GLRA1P23415 457 aa12.63□□□□□ -0.39
CHD3-205ENST00000449744 EPHA2P29317 976 aa12.63□□□□□ -0.39
CHD3-205ENST00000449744 GPM6AP51674 278 aa12.63□□□□□ -0.39
CHD3-205ENST00000449744 GNG3P63215 75 aa12.63□□□□□ -0.39
CHD3-205ENST00000449744 CEACAM21Q3KPI0 293 aa12.63□□□□□ -0.39
CHD3-205ENST00000449744 FAM76BQ5HYJ3 339 aa12.63□□□□□ -0.39
CHD3-205ENST00000449744 CEP78Q5JTW2 689 aa12.63□□□□□ -0.39
CHD3-205ENST00000449744 AADACL4Q5VUY2 407 aa12.63□□□□□ -0.39
CHD3-205ENST00000449744 STUMQ69YW2 141 aa12.63□□□□□ -0.39
CHD3-205ENST00000449744 DUX4L9Q6RFH8 374 aaPredicted RBP12.63□□□□□ -0.39
CHD3-205ENST00000449744 LHX4Q969G2 390 aa12.63□□□□□ -0.39
CHD3-205ENST00000449744 RAB3IPQ96QF0 476 aaPredicted RBP12.63□□□□□ -0.39
CHD3-205ENST00000449744 SIRPDQ9H106 197 aa12.63□□□□□ -0.39
CHD3-205ENST00000449744 DNTTIP1Q9H147 329 aa12.63□□□□□ -0.39
CHD3-205ENST00000449744 WDR13Q9H1Z4 485 aa12.63□□□□□ -0.39
CHD3-205ENST00000449744 MOB1AQ9H8S9 216 aa12.63□□□□□ -0.39
CHD3-205ENST00000449744 NOX4Q9NPH5 578 aa12.63□□□□□ -0.39
CHD3-205ENST00000449744 ONECUT1Q9UBC0 465 aa12.63□□□□□ -0.39
CHD3-205ENST00000449744 DUX4Q9UBX2 424 aa12.63□□□□□ -0.39
CHD3-205ENST00000449744 NUFIP1Q9UHK0 495 aaKnown RBP12.63□□□□□ -0.39
CHD3-205ENST00000449744 ENPP5Q9UJA9 477 aa12.63□□□□□ -0.39
CHD3-205ENST00000449744 PIGLQ9Y2B2 252 aa12.63□□□□□ -0.39
CHD3-205ENST00000449744 OR5B21A6NL26 309 aa12.62□□□□□ -0.39
CHD3-205ENST00000449744 FCN3O75636 299 aa12.62□□□□□ -0.39
CHD3-205ENST00000449744 EFNB1P98172 346 aa12.62□□□□□ -0.39
CHD3-205ENST00000449744 MFGE8Q08431 387 aaPredicted RBP12.62□□□□□ -0.39
CHD3-205ENST00000449744 CDONQ4KMG0 1287 aa12.62□□□□□ -0.39
CHD3-205ENST00000449744 BCL2L15Q5TBC7 163 aa12.62□□□□□ -0.39
CHD3-205ENST00000449744 ATPAF1Q5TC12 328 aaPredicted RBP12.62□□□□□ -0.39
CHD3-205ENST00000449744 ZBTB37Q5TC79 503 aa12.62□□□□□ -0.39
CHD3-205ENST00000449744 PLCXD3Q63HM9 321 aa12.62□□□□□ -0.39
CHD3-205ENST00000449744 C16orf87Q6PH81 154 aa12.62□□□□□ -0.39
CHD3-205ENST00000449744 CMTM4Q8IZR5 234 aa12.62□□□□□ -0.39
CHD3-205ENST00000449744 FGFRL1Q8N441 504 aa12.62□□□□□ -0.39
CHD3-205ENST00000449744 OR5A2Q8NGI9 324 aa12.62□□□□□ -0.39
CHD3-205ENST00000449744 OR51G2Q8NGK0 314 aa12.62□□□□□ -0.39
CHD3-205ENST00000449744 SGMS2Q8NHU3 365 aa12.62□□□□□ -0.39
CHD3-205ENST00000449744 ZNF671Q8TAW3 534 aa12.62□□□□□ -0.39
CHD3-205ENST00000449744 H1FXQ92522 213 aaKnown RBP12.62□□□□□ -0.39
CHD3-205ENST00000449744 PPP1R14AQ96A00 147 aa12.62□□□□□ -0.39
CHD3-205ENST00000449744 MED30Q96HR3 178 aa12.62□□□□□ -0.39
CHD3-205ENST00000449744 CIB1Q99828 191 aa12.62□□□□□ -0.39
CHD3-205ENST00000449744 APOL4Q9BPW4 351 aa12.62□□□□□ -0.39
CHD3-205ENST00000449744 FGF23Q9GZV9 251 aaPredicted RBP12.62□□□□□ -0.39
CHD3-205ENST00000449744 SEMA6AQ9H2E6 1030 aa12.62□□□□□ -0.39
CHD3-205ENST00000449744 PRDM13Q9H4Q3 707 aa12.62□□□□□ -0.39
CHD3-205ENST00000449744 ADGRL4Q9HBW9 690 aa12.62□□□□□ -0.39
CHD3-205ENST00000449744 TNFRSF19Q9NS68 423 aa12.62□□□□□ -0.39
CHD3-205ENST00000449744 ACOXLQ9NUZ1 547 aa12.62□□□□□ -0.39
CHD3-205ENST00000449744 CLN6Q9NWW5 311 aa12.62□□□□□ -0.39
CHD3-205ENST00000449744 NLKQ9UBE8 527 aa12.62□□□□□ -0.39
CHD3-205ENST00000449744 PCDHGB1Q9Y5G3 927 aa12.62□□□□□ -0.39
CHD3-205ENST00000449744 KPTNQ9Y664 436 aa12.62□□□□□ -0.39
CHD3-205ENST00000449744 IGHV1-69DA0A0B4J2H0 117 aa12.61□□□□□ -0.39
CHD3-205ENST00000449744 A0A1B0GVI7 797 aa12.61□□□□□ -0.39
CHD3-205ENST00000449744 MAGEB4O15481 346 aaPredicted RBP12.61□□□□□ -0.39
CHD3-205ENST00000449744 RHBDL1O75783 438 aa12.61□□□□□ -0.39
CHD3-205ENST00000449744 DHRS3O75911 302 aa12.61□□□□□ -0.39
CHD3-205ENST00000449744 IGLV3-1P01715 115 aa12.61□□□□□ -0.39
CHD3-205ENST00000449744 IGHV1-69P01742 117 aa12.61□□□□□ -0.39
CHD3-205ENST00000449744 TTRP02766 147 aa12.61□□□□□ -0.39
CHD3-205ENST00000449744 FAHP16930 419 aa12.61□□□□□ -0.39
CHD3-205ENST00000449744 AMY2BP19961 511 aa12.61□□□□□ -0.39
CHD3-205ENST00000449744 GABRA2P47869 451 aa12.61□□□□□ -0.39
CHD3-205ENST00000449744 TGM4P49221 684 aa12.61□□□□□ -0.39
CHD3-205ENST00000449744 IL13RA1P78552 427 aa12.61□□□□□ -0.39
CHD3-205ENST00000449744 EGR3Q06889 387 aa12.61□□□□□ -0.39
CHD3-205ENST00000449744 ZNF684Q5T5D7 378 aa12.61□□□□□ -0.39
CHD3-205ENST00000449744 Q6YL49 198 aa12.61□□□□□ -0.39
CHD3-205ENST00000449744 KRT74Q7RTS7 529 aa12.61□□□□□ -0.39
CHD3-205ENST00000449744 VMO1Q7Z5L0 202 aa12.61□□□□□ -0.39
CHD3-205ENST00000449744 TMIGD2Q96BF3 282 aa12.61□□□□□ -0.39
CHD3-205ENST00000449744 CENPNQ96H22 339 aaPredicted RBP12.61□□□□□ -0.39
CHD3-205ENST00000449744 DMRTB1Q96MA1 342 aa12.61□□□□□ -0.39
CHD3-205ENST00000449744 ZNF747Q9BV97 191 aa12.61□□□□□ -0.39
CHD3-205ENST00000449744 OR51I2Q9H344 312 aa12.61□□□□□ -0.39
CHD3-205ENST00000449744 RIBC2Q9H4K1 309 aa12.61□□□□□ -0.39
CHD3-205ENST00000449744 WARS2Q9UGM6 360 aaKnown RBP12.61□□□□□ -0.39
CHD3-205ENST00000449744 OR52A1Q9UKL2 312 aa12.61□□□□□ -0.39
CHD3-205ENST00000449744 R4GMQ9 66 aa12.61□□□□□ -0.39
CHD3-205ENST00000449744 SAC3D1A6NKF1 404 aa12.6□□□□□ -0.39
CHD3-205ENST00000449744 OR2AT4A6NND4 320 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms