RNA–Protein interactions for RNA: ENST00000448238.2

NIPBL-202, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 1 (best) BASIC

Gene NIPBL, Length 8,729 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-202ENST00000448238 HYAL1Q12794 435 aa8.11□□□□□ -1.11
NIPBL-202ENST00000448238 LEXMQ3ZCV2 418 aa8.11□□□□□ -1.11
NIPBL-202ENST00000448238 LIPNQ5VXI9 398 aa8.11□□□□□ -1.11
NIPBL-202ENST00000448238 SEZ6L2Q6UXD5 910 aa8.11□□□□□ -1.11
NIPBL-202ENST00000448238 OVCH2Q7RTZ1 564 aa8.11□□□□□ -1.11
NIPBL-202ENST00000448238 DEFB119Q8N690 84 aa8.11□□□□□ -1.11
NIPBL-202ENST00000448238 OR52I1Q8NGK6 324 aa8.11□□□□□ -1.11
NIPBL-202ENST00000448238 ANKRD61A6NGH8 418 aa8.11□□□□□ -1.11
NIPBL-202ENST00000448238 ARNTLO00327 626 aa8.11□□□□□ -1.11
NIPBL-202ENST00000448238 MT-ND6P03923 174 aa8.11□□□□□ -1.11
NIPBL-202ENST00000448238 SMIM13P0DJ93 91 aa8.11□□□□□ -1.11
NIPBL-202ENST00000448238 CDKN2DP55273 166 aa8.11□□□□□ -1.11
NIPBL-202ENST00000448238 C9orf135Q5VTT2 229 aa8.11□□□□□ -1.11
NIPBL-202ENST00000448238 TSACCQ96A04 125 aaPredicted RBP8.11□□□□□ -1.11
NIPBL-202ENST00000448238 PTX4Q96A99 478 aa8.11□□□□□ -1.11
NIPBL-202ENST00000448238 USP22Q9UPT9 525 aa8.11□□□□□ -1.11
NIPBL-202ENST00000448238 HBZP02008 142 aa8.11□□□□□ -1.11
NIPBL-202ENST00000448238 FAM157CP0CG43 387 aa8.11□□□□□ -1.11
NIPBL-202ENST00000448238 TBXA2RP21731 343 aa8.11□□□□□ -1.11
NIPBL-202ENST00000448238 PCSK6P29122 969 aa8.11□□□□□ -1.11
NIPBL-202ENST00000448238 TNFRSF4P43489 277 aa8.11□□□□□ -1.11
NIPBL-202ENST00000448238 OR4D1Q15615 310 aa8.11□□□□□ -1.11
NIPBL-202ENST00000448238 ZNF841Q6ZN19 808 aa8.11□□□□□ -1.11
NIPBL-202ENST00000448238 OR2Z1Q8NG97 314 aa8.11□□□□□ -1.11
NIPBL-202ENST00000448238 OR52B4Q8NGK2 314 aa8.11□□□□□ -1.11
NIPBL-202ENST00000448238 VSTM2AQ8TAG5 236 aa8.11□□□□□ -1.11
NIPBL-202ENST00000448238 INSL5Q9Y5Q6 135 aa8.11□□□□□ -1.11
NIPBL-202ENST00000448238 TMEM129A0AVI4 362 aa8.11□□□□□ -1.11
NIPBL-202ENST00000448238 C19orf67A6NJJ6 358 aa8.11□□□□□ -1.11
NIPBL-202ENST00000448238 GPX5O75715 221 aa8.11□□□□□ -1.11
NIPBL-202ENST00000448238 H1FNTQ75WM6 255 aaPredicted RBP8.11□□□□□ -1.11
NIPBL-202ENST00000448238 OR4D9Q8NGE8 314 aa8.11□□□□□ -1.11
NIPBL-202ENST00000448238 APIPQ96GX9 242 aa8.11□□□□□ -1.11
NIPBL-202ENST00000448238 NTMT1Q9BV86 223 aa8.11□□□□□ -1.11
NIPBL-202ENST00000448238 C1QTNF3Q9BXJ4 246 aa8.11□□□□□ -1.11
NIPBL-202ENST00000448238 MRPL16Q9NX20 251 aaKnown RBP8.11□□□□□ -1.11
NIPBL-202ENST00000448238 SLC5A6Q9Y289 635 aa8.11□□□□□ -1.11
NIPBL-202ENST00000448238 MED13Q9UHV7 2174 aa8.11□□□□□ -1.11
NIPBL-202ENST00000448238 HNRNPA1P09651 372 aaKnown RBP eCLIP8.11□□□□□ -1.11
NIPBL-202ENST00000448238 SNRPNP63162 240 aaKnown RBP8.11□□□□□ -1.11
NIPBL-202ENST00000448238 WDR34Q96EX3 536 aa8.11□□□□□ -1.11
NIPBL-202ENST00000448238 PIK3IP1Q96FE7 263 aa8.11□□□□□ -1.11
NIPBL-202ENST00000448238 CITED1Q99966 193 aa8.11□□□□□ -1.11
NIPBL-202ENST00000448238 SPHK2Q9NRA0 654 aa8.11□□□□□ -1.11
NIPBL-202ENST00000448238 WNT16Q9UBV4 365 aa8.11□□□□□ -1.11
NIPBL-202ENST00000448238 LPAR3Q9UBY5 353 aa8.11□□□□□ -1.11
NIPBL-202ENST00000448238 TIMM10BQ9Y5J6 103 aa8.11□□□□□ -1.11
NIPBL-202ENST00000448238 FDXRP22570 491 aa8.1□□□□□ -1.11
NIPBL-202ENST00000448238 NHSL2Q5HYW2 709 aa8.1□□□□□ -1.11
NIPBL-202ENST00000448238 ZNF506Q5JVG8 444 aa8.1□□□□□ -1.11
NIPBL-202ENST00000448238 FAM53AQ6NSI3 398 aaPredicted RBP8.1□□□□□ -1.11
NIPBL-202ENST00000448238 PIGTQ969N2 578 aa8.1□□□□□ -1.11
NIPBL-202ENST00000448238 SLAMF6Q96DU3 332 aa8.1□□□□□ -1.11
NIPBL-202ENST00000448238 OR5M11Q96RB7 305 aa8.1□□□□□ -1.11
NIPBL-202ENST00000448238 ANAPC13Q9BS18 74 aa8.1□□□□□ -1.11
NIPBL-202ENST00000448238 GSTZ1O43708 216 aaPredicted RBP8.1□□□□□ -1.11
NIPBL-202ENST00000448238 CDS2O95674 445 aa8.1□□□□□ -1.11
NIPBL-202ENST00000448238 ZNF865P0CJ78 1059 aaPredicted RBP8.1□□□□□ -1.11
NIPBL-202ENST00000448238 C10orf128Q5T292 105 aa8.1□□□□□ -1.11
NIPBL-202ENST00000448238 ALKBH7Q9BT30 221 aaPredicted RBP8.1□□□□□ -1.11
NIPBL-202ENST00000448238 SH3BGRL3Q9H299 93 aa8.1□□□□□ -1.11
NIPBL-202ENST00000448238 ATP23Q9Y6H3 246 aa8.1□□□□□ -1.11
NIPBL-202ENST00000448238 ADAMTS12P58397 1594 aa8.1□□□□□ -1.11
NIPBL-202ENST00000448238 SOWAHAQ2M3V2 549 aa8.1□□□□□ -1.11
NIPBL-202ENST00000448238 MEIG1Q5JSS6 88 aa8.1□□□□□ -1.11
NIPBL-202ENST00000448238 FCRL6Q6DN72 434 aa8.1□□□□□ -1.11
NIPBL-202ENST00000448238 CCDC190Q86UF4 302 aa8.1□□□□□ -1.11
NIPBL-202ENST00000448238 ZDHHC23Q8IYP9 409 aa8.1□□□□□ -1.11
NIPBL-202ENST00000448238 FUBP1Q96AE4 644 aaKnown RBP8.1□□□□□ -1.11
NIPBL-202ENST00000448238 NEURL2Q9BR09 285 aa8.1□□□□□ -1.11
NIPBL-202ENST00000448238 KIAA0556O60303 1618 aa8.1□□□□□ -1.11
NIPBL-202ENST00000448238 SERTM1A2A2V5 107 aa8.1□□□□□ -1.11
NIPBL-202ENST00000448238 CA12O43570 354 aa8.1□□□□□ -1.11
NIPBL-202ENST00000448238 HLA-DRB3P79483 266 aa8.1□□□□□ -1.11
NIPBL-202ENST00000448238 LHFPL4Q7Z7J7 247 aa8.1□□□□□ -1.11
NIPBL-202ENST00000448238 OR1L6Q8NGR2 347 aa8.1□□□□□ -1.11
NIPBL-202ENST00000448238 RBMY1BA6NDE4 496 aaKnown RBP8.1□□□□□ -1.11
NIPBL-202ENST00000448238 RBMY1EA6NEQ0 496 aaKnown RBP8.1□□□□□ -1.11
NIPBL-202ENST00000448238 RBMY1DP0C7P1 496 aaKnown RBP8.1□□□□□ -1.11
NIPBL-202ENST00000448238 RBMY1A1P0DJD3 496 aaKnown RBP8.1□□□□□ -1.11
NIPBL-202ENST00000448238 RBMY1CP0DJD4 496 aa8.1□□□□□ -1.11
NIPBL-202ENST00000448238 DRD1P21728 446 aa8.1□□□□□ -1.11
NIPBL-202ENST00000448238 APOBEC1P41238 236 aaKnown RBP8.1□□□□□ -1.11
NIPBL-202ENST00000448238 NUBP1P53384 320 aa8.1□□□□□ -1.11
NIPBL-202ENST00000448238 ATP5IP56385 69 aaPredicted RBP8.1□□□□□ -1.11
NIPBL-202ENST00000448238 CLDN20P56880 219 aa8.1□□□□□ -1.11
NIPBL-202ENST00000448238 DCDP81605 110 aaKnown RBP8.1□□□□□ -1.11
NIPBL-202ENST00000448238 ARHGEF5Q12774 1597 aa8.1□□□□□ -1.11
NIPBL-202ENST00000448238 ASTLQ6HA08 431 aaPredicted RBP8.1□□□□□ -1.11
NIPBL-202ENST00000448238 KIR3DL3Q8N743 410 aa8.1□□□□□ -1.11
NIPBL-202ENST00000448238 ZNF384Q8TF68 577 aa8.1□□□□□ -1.11
NIPBL-202ENST00000448238 STARD5Q9NSY2 213 aa8.1□□□□□ -1.11
NIPBL-202ENST00000448238 C1RLQ9NZP8 487 aa8.1□□□□□ -1.11
NIPBL-202ENST00000448238 IQSEC2Q5JU85 1478 aa8.1□□□□□ -1.11
NIPBL-202ENST00000448238 TMEM30CPA0ZSE6 113 aa8.1□□□□□ -1.11
NIPBL-202ENST00000448238 EIF4E2O60573 245 aaKnown RBP8.1□□□□□ -1.11
NIPBL-202ENST00000448238 TNFSF10P50591 281 aa8.1□□□□□ -1.11
NIPBL-202ENST00000448238 CCR5P51681 352 aa8.1□□□□□ -1.11
NIPBL-202ENST00000448238 CLDN15P56746 228 aa8.1□□□□□ -1.11
NIPBL-202ENST00000448238 OR52I2Q8NH67 350 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms