RNA–Protein interactions for RNA: ENST00000448223.6

SMC6-207, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC6, Length 5,233 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-207ENST00000448223 CST7O76096 145 aa8.32□□□□□ -1.08
SMC6-207ENST00000448223 CNIH1O95406 144 aa8.32□□□□□ -1.08
SMC6-207ENST00000448223 ABHD16AO95870 558 aa8.32□□□□□ -1.08
SMC6-207ENST00000448223 LIMS3P0CW19 117 aa8.32□□□□□ -1.08
SMC6-207ENST00000448223 LIMS4P0CW20 117 aa8.32□□□□□ -1.08
SMC6-207ENST00000448223 LIM2P55344 173 aa8.32□□□□□ -1.08
SMC6-207ENST00000448223 DEFB115Q30KQ5 88 aa8.32□□□□□ -1.08
SMC6-207ENST00000448223 Q56UQ5 140 aa8.32□□□□□ -1.08
SMC6-207ENST00000448223 VWA2Q5GFL6 755 aa8.32□□□□□ -1.08
SMC6-207ENST00000448223 SLC35D3Q5M8T2 416 aa8.32□□□□□ -1.08
SMC6-207ENST00000448223 NPSR1Q6W5P4 371 aa8.32□□□□□ -1.08
SMC6-207ENST00000448223 NIT1Q86X76 327 aa8.32□□□□□ -1.08
SMC6-207ENST00000448223 ZNF511Q8NB15 262 aa8.32□□□□□ -1.08
SMC6-207ENST00000448223 COL25A1Q9BXS0 654 aaPredicted RBP8.32□□□□□ -1.08
SMC6-207ENST00000448223 PRSS50Q9UI38 385 aa8.32□□□□□ -1.08
SMC6-207ENST00000448223 DEGS1O15121 323 aa8.32□□□□□ -1.08
SMC6-207ENST00000448223 IRF2P14316 349 aa8.32□□□□□ -1.08
SMC6-207ENST00000448223 CCR2P41597 374 aa8.32□□□□□ -1.08
SMC6-207ENST00000448223 OR1D4P47884 311 aa8.32□□□□□ -1.08
SMC6-207ENST00000448223 DHRS2Q13268 280 aa8.32□□□□□ -1.08
SMC6-207ENST00000448223 GAMTQ14353 236 aa8.32□□□□□ -1.08
SMC6-207ENST00000448223 LURAP1LQ8IV03 231 aa8.32□□□□□ -1.08
SMC6-207ENST00000448223 CHST8Q9H2A9 424 aa8.32□□□□□ -1.08
SMC6-207ENST00000448223 PSENENQ9NZ42 101 aa8.32□□□□□ -1.08
SMC6-207ENST00000448223 DNMT3BQ9UBC3 853 aaKnown RBP8.32□□□□□ -1.08
SMC6-207ENST00000448223 CBLCQ9ULV8 474 aa8.32□□□□□ -1.08
SMC6-207ENST00000448223 SSUH2Q9Y2M2 353 aa8.32□□□□□ -1.08
SMC6-207ENST00000448223 NOSIPQ9Y314 301 aaKnown RBP8.32□□□□□ -1.08
SMC6-207ENST00000448223 OR4C45A6NMZ5 311 aa8.32□□□□□ -1.08
SMC6-207ENST00000448223 NMBP08949 121 aa8.32□□□□□ -1.08
SMC6-207ENST00000448223 ASCL1P50553 236 aa8.32□□□□□ -1.08
SMC6-207ENST00000448223 CLN3Q13286 438 aa8.32□□□□□ -1.08
SMC6-207ENST00000448223 SLC25A35Q3KQZ1 300 aa8.32□□□□□ -1.08
SMC6-207ENST00000448223 H2BFWTQ7Z2G1 175 aa8.32□□□□□ -1.08
SMC6-207ENST00000448223 TSEN54Q7Z6J9 526 aaKnown RBP8.32□□□□□ -1.08
SMC6-207ENST00000448223 CDC20BQ86Y33 519 aa8.32□□□□□ -1.08
SMC6-207ENST00000448223 ZNF737O75373 536 aa8.31□□□□□ -1.08
SMC6-207ENST00000448223 GP1BAP07359 652 aa8.31□□□□□ -1.08
SMC6-207ENST00000448223 SFTPCP11686 197 aa8.31□□□□□ -1.08
SMC6-207ENST00000448223 ENPP1P22413 925 aa8.31□□□□□ -1.08
SMC6-207ENST00000448223 UQCRFS1P47985 274 aa8.31□□□□□ -1.08
SMC6-207ENST00000448223 RAB38P57729 211 aa8.31□□□□□ -1.08
SMC6-207ENST00000448223 DOC2BQ14184 412 aa8.31□□□□□ -1.08
SMC6-207ENST00000448223 TCTN1Q2MV58 587 aa8.31□□□□□ -1.08
SMC6-207ENST00000448223 ZNF718Q3SXZ3 478 aa8.31□□□□□ -1.08
SMC6-207ENST00000448223 GGTA1PQ4G0N0 100 aa8.31□□□□□ -1.08
SMC6-207ENST00000448223 ZNF880Q6PDB4 577 aa8.31□□□□□ -1.08
SMC6-207ENST00000448223 PRSS54Q6PEW0 395 aa8.31□□□□□ -1.08
SMC6-207ENST00000448223 PRICKLE2Q7Z3G6 844 aa8.31□□□□□ -1.08
SMC6-207ENST00000448223 ZC3HAV1LQ96H79 300 aaKnown RBP8.31□□□□□ -1.08
SMC6-207ENST00000448223 BANF2Q9H503 90 aa8.31□□□□□ -1.08
SMC6-207ENST00000448223 PELI2Q9HAT8 420 aa8.31□□□□□ -1.08
SMC6-207ENST00000448223 HES4Q9HCC6 221 aa8.31□□□□□ -1.08
SMC6-207ENST00000448223 TAAR2Q9P1P5 351 aa8.31□□□□□ -1.08
SMC6-207ENST00000448223 C19orf25Q9UFG5 118 aaPredicted RBP8.31□□□□□ -1.08
SMC6-207ENST00000448223 TBX21Q9UL17 535 aa8.31□□□□□ -1.08
SMC6-207ENST00000448223 LIPGQ9Y5X9 500 aa8.31□□□□□ -1.08
SMC6-207ENST00000448223 MPTX1A8MV57 137 aa8.31□□□□□ -1.08
SMC6-207ENST00000448223 B4DGG1 531 aa8.31□□□□□ -1.08
SMC6-207ENST00000448223 GPANK1O95872 356 aa8.31□□□□□ -1.08
SMC6-207ENST00000448223 RAET1LQ5VY80 246 aa8.31□□□□□ -1.08
SMC6-207ENST00000448223 ADAT3Q96EY9 351 aaPredicted RBP8.31□□□□□ -1.08
SMC6-207ENST00000448223 NRIP2Q9BQI9 281 aa8.31□□□□□ -1.08
SMC6-207ENST00000448223 VN1R3Q9BXE9 311 aa8.31□□□□□ -1.08
SMC6-207ENST00000448223 FAM234AQ9H0X4 552 aa8.31□□□□□ -1.08
SMC6-207ENST00000448223 TDRD15B5MCY1 1934 aaKnown RBP8.31□□□□□ -1.08
SMC6-207ENST00000448223 LOC102725191A0A1B0GVB3 256 aa8.31□□□□□ -1.08
SMC6-207ENST00000448223 GFYI3L273 518 aa8.31□□□□□ -1.08
SMC6-207ENST00000448223 CTNSO60931 367 aa8.31□□□□□ -1.08
SMC6-207ENST00000448223 SLC2A10O95528 541 aa8.31□□□□□ -1.08
SMC6-207ENST00000448223 TRGC2P03986 189 aa8.31□□□□□ -1.08
SMC6-207ENST00000448223 HOXD4P09016 255 aaPredicted RBP8.31□□□□□ -1.08
SMC6-207ENST00000448223 IAPPP10997 89 aa8.31□□□□□ -1.08
SMC6-207ENST00000448223 NOGQ13253 232 aa8.31□□□□□ -1.08
SMC6-207ENST00000448223 OR10G3Q8NGC4 313 aa8.31□□□□□ -1.08
SMC6-207ENST00000448223 OR11H7Q8NGC8 314 aa8.31□□□□□ -1.08
SMC6-207ENST00000448223 OR1L3Q8NH93 324 aa8.31□□□□□ -1.08
SMC6-207ENST00000448223 HSPB9Q9BQS6 159 aa8.31□□□□□ -1.08
SMC6-207ENST00000448223 ANGPTL4Q9BY76 406 aa8.31□□□□□ -1.08
SMC6-207ENST00000448223 TMEM38AQ9H6F2 299 aa8.31□□□□□ -1.08
SMC6-207ENST00000448223 MED19A0JLT2 244 aaPredicted RBP8.31□□□□□ -1.08
SMC6-207ENST00000448223 H7C1C5 153 aa8.31□□□□□ -1.08
SMC6-207ENST00000448223 DOK2O60496 412 aa8.31□□□□□ -1.08
SMC6-207ENST00000448223 FGF9P31371 208 aaPredicted RBP8.31□□□□□ -1.08
SMC6-207ENST00000448223 FAM3BP58499 235 aaPredicted RBP8.31□□□□□ -1.08
SMC6-207ENST00000448223 RAE1P78406 368 aaKnown RBP8.31□□□□□ -1.08
SMC6-207ENST00000448223 FAM27D1Q5T7N8 215 aa8.31□□□□□ -1.08
SMC6-207ENST00000448223 TCTN3Q6NUS6 607 aa8.31□□□□□ -1.08
SMC6-207ENST00000448223 SCGB1D4Q6XE38 83 aa8.31□□□□□ -1.08
SMC6-207ENST00000448223 OR2L13Q8N349 312 aa8.31□□□□□ -1.08
SMC6-207ENST00000448223 METTL27Q8N6F8 245 aaPredicted RBP8.31□□□□□ -1.08
SMC6-207ENST00000448223 AMER3Q8N944 861 aa8.31□□□□□ -1.08
SMC6-207ENST00000448223 ZDHHC22Q8N966 263 aa8.31□□□□□ -1.08
SMC6-207ENST00000448223 SLC17A9Q9BYT1 436 aa8.31□□□□□ -1.08
SMC6-207ENST00000448223 FBXL17Q9UF56 701 aa8.31□□□□□ -1.08
SMC6-207ENST00000448223 OR51B4Q9Y5P0 310 aa8.31□□□□□ -1.08
SMC6-207ENST00000448223 TRAV1-2A0A0B4J238 106 aa8.3□□□□□ -1.08
SMC6-207ENST00000448223 KIR2DS1A0A191URI9 304 aa8.3□□□□□ -1.08
SMC6-207ENST00000448223 HSPB6O14558 160 aa8.3□□□□□ -1.08
SMC6-207ENST00000448223 GPR37O15354 613 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms