RNA–Protein interactions for RNA: ENST00000447182.6

SDCBP-204, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SDCBP, Length 2,103 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-204ENST00000447182 RBM39Q14498 530 aaKnown RBP16.77■□□□□ 0.28
SDCBP-204ENST00000447182 CHRFAM7AQ494W8 412 aa16.77■□□□□ 0.28
SDCBP-204ENST00000447182 CADM4Q8NFZ8 388 aa16.77■□□□□ 0.28
SDCBP-204ENST00000447182 OR5L2Q8NGL0 311 aa16.77■□□□□ 0.28
SDCBP-204ENST00000447182 ZNF814B7Z6K7 855 aa16.76■□□□□ 0.27
SDCBP-204ENST00000447182 E9PLN8 166 aa16.76■□□□□ 0.27
SDCBP-204ENST00000447182 RRP8O43159 456 aaKnown RBP16.76■□□□□ 0.27
SDCBP-204ENST00000447182 FBXO24O75426 580 aa16.76■□□□□ 0.27
SDCBP-204ENST00000447182 SPP1P10451 314 aa16.76■□□□□ 0.27
SDCBP-204ENST00000447182 GLB1P16278 677 aa16.76■□□□□ 0.27
SDCBP-204ENST00000447182 ZNF43P17038 809 aa16.76■□□□□ 0.27
SDCBP-204ENST00000447182 NFYBP25208 207 aa16.76■□□□□ 0.27
SDCBP-204ENST00000447182 SPEM2Q0P670 501 aa16.76■□□□□ 0.27
SDCBP-204ENST00000447182 WDR74Q6RFH5 385 aaPredicted RBP16.76■□□□□ 0.27
SDCBP-204ENST00000447182 LYPD6BQ8NI32 183 aa16.76■□□□□ 0.27
SDCBP-204ENST00000447182 RNF122Q9H9V4 155 aa16.76■□□□□ 0.27
SDCBP-204ENST00000447182 TUBD1Q9UJT1 453 aa16.76■□□□□ 0.27
SDCBP-204ENST00000447182 A0A0U1RQV5 110 aa16.76■□□□□ 0.27
SDCBP-204ENST00000447182 A0A1W2PNR3 127 aa16.76■□□□□ 0.27
SDCBP-204ENST00000447182 FAM157AC9JC47 383 aa16.76■□□□□ 0.27
SDCBP-204ENST00000447182 JTBO76095 146 aa16.76■□□□□ 0.27
SDCBP-204ENST00000447182 SFTPBP07988 381 aa16.76■□□□□ 0.27
SDCBP-204ENST00000447182 FOLR2P14207 255 aa16.76■□□□□ 0.27
SDCBP-204ENST00000447182 RBMXP38159 391 aaKnown RBP16.76■□□□□ 0.27
SDCBP-204ENST00000447182 F2RL1P55085 397 aa16.76■□□□□ 0.27
SDCBP-204ENST00000447182 LSM6P62312 80 aaKnown RBP16.76■□□□□ 0.27
SDCBP-204ENST00000447182 RABEPKQ7Z6M1 372 aa16.76■□□□□ 0.27
SDCBP-204ENST00000447182 LYZL4Q96KX0 146 aa16.76■□□□□ 0.27
SDCBP-204ENST00000447182 PCED1AQ9H1Q7 454 aa16.76■□□□□ 0.27
SDCBP-204ENST00000447182 DECR2Q9NUI1 292 aa16.76■□□□□ 0.27
SDCBP-204ENST00000447182 PCDHGA1Q9Y5H4 931 aa16.76■□□□□ 0.27
SDCBP-204ENST00000447182 V9GYS6 101 aa16.76■□□□□ 0.27
SDCBP-204ENST00000447182 ZNF726A6NNF4 738 aa16.75■□□□□ 0.27
SDCBP-204ENST00000447182 IFNA4P05014 189 aa16.75■□□□□ 0.27
SDCBP-204ENST00000447182 SERPINA5P05154 406 aa16.75■□□□□ 0.27
SDCBP-204ENST00000447182 HOXB1P14653 301 aaPredicted RBP16.75■□□□□ 0.27
SDCBP-204ENST00000447182 RCC1P18754 421 aaPredicted RBP16.75■□□□□ 0.27
SDCBP-204ENST00000447182 RPL12P30050 165 aaKnown RBP16.75■□□□□ 0.27
SDCBP-204ENST00000447182 ACY1Q03154 408 aa16.75■□□□□ 0.27
SDCBP-204ENST00000447182 SMAD2Q15796 467 aaKnown RBP16.75■□□□□ 0.27
SDCBP-204ENST00000447182 IAH1Q2TAA2 248 aaPredicted RBP16.75■□□□□ 0.27
SDCBP-204ENST00000447182 Q6ZSR3 168 aa16.75■□□□□ 0.27
SDCBP-204ENST00000447182 SLC25A43Q8WUT9 341 aaPredicted RBP16.75■□□□□ 0.27
SDCBP-204ENST00000447182 MAFIPQ8WZ33 124 aa16.75■□□□□ 0.27
SDCBP-204ENST00000447182 CPNE2Q96FN4 548 aaPredicted RBP16.75■□□□□ 0.27
SDCBP-204ENST00000447182 PGAM5Q96HS1 289 aa16.75■□□□□ 0.27
SDCBP-204ENST00000447182 SHDQ96IW2 340 aa16.75■□□□□ 0.27
SDCBP-204ENST00000447182 WDR77Q9BQA1 342 aaPredicted RBP16.75■□□□□ 0.27
SDCBP-204ENST00000447182 AQP7P3A6NL99 342 aa16.75■□□□□ 0.27
SDCBP-204ENST00000447182 COLCA2A8K830 154 aa16.75■□□□□ 0.27
SDCBP-204ENST00000447182 STMND1H3BQB6 276 aa16.75■□□□□ 0.27
SDCBP-204ENST00000447182 DEDDO75618 318 aa16.75■□□□□ 0.27
SDCBP-204ENST00000447182 KNG1P01042 644 aa16.75■□□□□ 0.27
SDCBP-204ENST00000447182 OPN1LWP04000 364 aa16.75■□□□□ 0.27
SDCBP-204ENST00000447182 NME2P22392 152 aa16.75■□□□□ 0.27
SDCBP-204ENST00000447182 CPT2P23786 658 aa16.75■□□□□ 0.27
SDCBP-204ENST00000447182 DVL1P1P54792 670 aaPredicted RBP16.75■□□□□ 0.27
SDCBP-204ENST00000447182 B2MP61769 119 aa16.75■□□□□ 0.27
SDCBP-204ENST00000447182 PEA15Q15121 130 aa16.75■□□□□ 0.27
SDCBP-204ENST00000447182 FAM219AQ8IW50 185 aa16.75■□□□□ 0.27
SDCBP-204ENST00000447182 OR2M3Q8NG83 312 aa16.75■□□□□ 0.27
SDCBP-204ENST00000447182 OR5D18Q8NGL1 313 aa16.75■□□□□ 0.27
SDCBP-204ENST00000447182 PP6455Q8WZ26 134 aa16.75■□□□□ 0.27
SDCBP-204ENST00000447182 SLC7A5P2Q9GIP4 190 aa16.75■□□□□ 0.27
SDCBP-204ENST00000447182 METTL7AQ9H8H3 244 aa16.75■□□□□ 0.27
SDCBP-204ENST00000447182 LHX6Q9UPM6 363 aa16.75■□□□□ 0.27
SDCBP-204ENST00000447182 HDGFL3Q9Y3E1 203 aa16.75■□□□□ 0.27
SDCBP-204ENST00000447182 SPAG17Q6Q759 2223 aa16.74■□□□□ 0.27
SDCBP-204ENST00000447182 K7EPK0 472 aa16.74■□□□□ 0.27
SDCBP-204ENST00000447182 DHRS3O75911 302 aa16.74■□□□□ 0.27
SDCBP-204ENST00000447182 CTSDP07339 412 aaPredicted RBP16.74■□□□□ 0.27
SDCBP-204ENST00000447182 S100A12P80511 92 aa16.74■□□□□ 0.27
SDCBP-204ENST00000447182 OR2A2Q6IF42 318 aa16.74■□□□□ 0.27
SDCBP-204ENST00000447182 FAM71E2Q8N5Q1 922 aa16.74■□□□□ 0.27
SDCBP-204ENST00000447182 OR10G3Q8NGC4 313 aa16.74■□□□□ 0.27
SDCBP-204ENST00000447182 CMSS1Q9BQ75 279 aaKnown RBP16.74■□□□□ 0.27
SDCBP-204ENST00000447182 CHST5Q9GZS9 411 aa16.74■□□□□ 0.27
SDCBP-204ENST00000447182 EGLN1Q9GZT9 426 aa16.74■□□□□ 0.27
SDCBP-204ENST00000447182 PLA2G2EQ9NZK7 142 aa16.74■□□□□ 0.27
SDCBP-204ENST00000447182 NCOA6Q14686 2063 aaPredicted RBP16.74■□□□□ 0.27
SDCBP-204ENST00000447182 C5orf63A6NC05 138 aa16.73■□□□□ 0.27
SDCBP-204ENST00000447182 TLX3O43711 291 aaPredicted RBP16.73■□□□□ 0.27
SDCBP-204ENST00000447182 RAMP1O60894 148 aa16.73■□□□□ 0.27
SDCBP-204ENST00000447182 NR2C1P13056 603 aa16.73■□□□□ 0.27
SDCBP-204ENST00000447182 SERPINA2P20848 420 aa16.73■□□□□ 0.27
SDCBP-204ENST00000447182 FKBP2P26885 142 aaKnown RBP16.73■□□□□ 0.27
SDCBP-204ENST00000447182 FAM3AP98173 230 aa16.73■□□□□ 0.27
SDCBP-204ENST00000447182 UBE2V2Q15819 145 aa16.73■□□□□ 0.27
SDCBP-204ENST00000447182 FAM76BQ5HYJ3 339 aa16.73■□□□□ 0.27
SDCBP-204ENST00000447182 OPN5Q6U736 354 aa16.73■□□□□ 0.27
SDCBP-204ENST00000447182 SGPP2Q8IWX5 399 aa16.73■□□□□ 0.27
SDCBP-204ENST00000447182 SEMA6DQ8NFY4 1073 aa16.73■□□□□ 0.27
SDCBP-204ENST00000447182 FNDC9Q8TBE3 224 aa16.73■□□□□ 0.27
SDCBP-204ENST00000447182 HAS2Q92819 552 aa16.73■□□□□ 0.27
SDCBP-204ENST00000447182 LIN37Q96GY3 246 aaPredicted RBP16.73■□□□□ 0.27
SDCBP-204ENST00000447182 SULT4A1Q9BR01 284 aa16.73■□□□□ 0.27
SDCBP-204ENST00000447182 IFT22Q9H7X7 185 aa16.73■□□□□ 0.27
SDCBP-204ENST00000447182 SMCO4Q9NRQ5 59 aa16.73■□□□□ 0.27
SDCBP-204ENST00000447182 MYOTQ9UBF9 498 aa16.73■□□□□ 0.27
SDCBP-204ENST00000447182 CRYM-AS1A6NIL9 109 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms