RNA–Protein interactions for RNA: ENST00000445902.2

VPS52-212, Transcript of VPS52, GARP complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS52, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-212ENST00000445902 LHFPL1Q86WI0 220 aa12.33□□□□□ -0.44
VPS52-212ENST00000445902 OR5D14Q8NGL3 314 aa12.33□□□□□ -0.44
VPS52-212ENST00000445902 PBDC1Q9BVG4 233 aa12.33□□□□□ -0.44
VPS52-212ENST00000445902 OR8D2Q9GZM6 311 aa12.33□□□□□ -0.44
VPS52-212ENST00000445902 ADAM19Q9H013 955 aa12.33□□□□□ -0.44
VPS52-212ENST00000445902 C1orf123Q9NWV4 160 aa12.33□□□□□ -0.44
VPS52-212ENST00000445902 H3BQ15 152 aa12.32□□□□□ -0.44
VPS52-212ENST00000445902 C5AR1P21730 350 aa12.32□□□□□ -0.44
VPS52-212ENST00000445902 RGS19P49795 217 aa12.32□□□□□ -0.44
VPS52-212ENST00000445902 RAB1AP62820 205 aa12.32□□□□□ -0.44
VPS52-212ENST00000445902 NKX6-1P78426 367 aaPredicted RBP12.32□□□□□ -0.44
VPS52-212ENST00000445902 ELOBQ15370 118 aa12.32□□□□□ -0.44
VPS52-212ENST00000445902 SGCBQ16585 318 aa12.32□□□□□ -0.44
VPS52-212ENST00000445902 KDF1Q8NAX2 398 aaPredicted RBP12.32□□□□□ -0.44
VPS52-212ENST00000445902 GALNT14Q96FL9 552 aa12.32□□□□□ -0.44
VPS52-212ENST00000445902 POM121Q96HA1 1249 aa12.32□□□□□ -0.44
VPS52-212ENST00000445902 SCGB3A2Q96PL1 93 aa12.32□□□□□ -0.44
VPS52-212ENST00000445902 S100A13Q99584 98 aa12.32□□□□□ -0.44
VPS52-212ENST00000445902 PBOV1Q9GZY1 135 aa12.32□□□□□ -0.44
VPS52-212ENST00000445902 CRLF2Q9HC73 371 aa12.32□□□□□ -0.44
VPS52-212ENST00000445902 PNO1Q9NRX1 252 aaKnown RBP12.32□□□□□ -0.44
VPS52-212ENST00000445902 VSX1Q9NZR4 365 aaPredicted RBP12.32□□□□□ -0.44
VPS52-212ENST00000445902 CLDN16Q9Y5I7 305 aa12.32□□□□□ -0.44
VPS52-212ENST00000445902 IGKV1D-8A0A087WSZ0 117 aa12.32□□□□□ -0.44
VPS52-212ENST00000445902 ARGFXA6NJG6 315 aa12.32□□□□□ -0.44
VPS52-212ENST00000445902 C17orf105B2RV13 164 aa12.32□□□□□ -0.44
VPS52-212ENST00000445902 ZNF587BE7ETH6 402 aa12.32□□□□□ -0.44
VPS52-212ENST00000445902 FKTNO75072 461 aa12.32□□□□□ -0.44
VPS52-212ENST00000445902 MBPP02686 304 aaPredicted RBP12.32□□□□□ -0.44
VPS52-212ENST00000445902 HEXBP07686 556 aa12.32□□□□□ -0.44
VPS52-212ENST00000445902 SNRPCP09234 159 aaKnown RBP12.32□□□□□ -0.44
VPS52-212ENST00000445902 GIMD1P0DJR0 217 aa12.32□□□□□ -0.44
VPS52-212ENST00000445902 UBE2KP61086 200 aa12.32□□□□□ -0.44
VPS52-212ENST00000445902 FOXK1P85037 733 aa12.32□□□□□ -0.44
VPS52-212ENST00000445902 CHRFAM7AQ494W8 412 aa12.32□□□□□ -0.44
VPS52-212ENST00000445902 DEFB118Q96PH6 123 aa12.32□□□□□ -0.44
VPS52-212ENST00000445902 MED29Q9NX70 200 aa12.32□□□□□ -0.44
VPS52-212ENST00000445902 PISDQ9UG56 409 aa12.32□□□□□ -0.44
VPS52-212ENST00000445902 CEACAM18A8MTB9 384 aa12.31□□□□□ -0.44
VPS52-212ENST00000445902 GUSBP08236 651 aa12.31□□□□□ -0.44
VPS52-212ENST00000445902 GSTP1P09211 210 aaKnown RBP12.31□□□□□ -0.44
VPS52-212ENST00000445902 ZNF542PQ5EBM4 170 aa12.31□□□□□ -0.44
VPS52-212ENST00000445902 OR2T2Q6IF00 324 aa12.31□□□□□ -0.44
VPS52-212ENST00000445902 HIST3H2BBQ8N257 126 aa12.31□□□□□ -0.44
VPS52-212ENST00000445902 FAM71F1Q96KD3 344 aaPredicted RBP12.31□□□□□ -0.44
VPS52-212ENST00000445902 FAM206AQ9NX38 181 aa12.31□□□□□ -0.44
VPS52-212ENST00000445902 DOCK8Q8NF50 2099 aa12.31□□□□□ -0.44
VPS52-212ENST00000445902 BORCS7-ASMTA0A0B4J1R7 106 aa12.31□□□□□ -0.44
VPS52-212ENST00000445902 A0A0J9YY10 115 aa12.31□□□□□ -0.44
VPS52-212ENST00000445902 SEC14L6B5MCN3 397 aa12.31□□□□□ -0.44
VPS52-212ENST00000445902 TSTD3H0UI37 97 aa12.31□□□□□ -0.44
VPS52-212ENST00000445902 CHRM2P08172 466 aa12.31□□□□□ -0.44
VPS52-212ENST00000445902 APOBEC1P41238 236 aaKnown RBP12.31□□□□□ -0.44
VPS52-212ENST00000445902 UBE2V2Q15819 145 aa12.31□□□□□ -0.44
VPS52-212ENST00000445902 TSPO2Q5TGU0 170 aa12.31□□□□□ -0.44
VPS52-212ENST00000445902 TGIF2LXQ8IUE1 241 aa12.31□□□□□ -0.44
VPS52-212ENST00000445902 COMMD1Q8N668 190 aa12.31□□□□□ -0.44
VPS52-212ENST00000445902 OR51T1Q8NGJ9 327 aa12.31□□□□□ -0.44
VPS52-212ENST00000445902 RNASE11Q8TAA1 199 aaKnown RBP12.31□□□□□ -0.44
VPS52-212ENST00000445902 CCNL2Q96S94 520 aaPredicted RBP12.31□□□□□ -0.44
VPS52-212ENST00000445902 FIGNL2A6NMB9 653 aa12.3□□□□□ -0.44
VPS52-212ENST00000445902 IFNA21P01568 189 aa12.3□□□□□ -0.44
VPS52-212ENST00000445902 CLPSP04118 112 aa12.3□□□□□ -0.44
VPS52-212ENST00000445902 SEC11BP0C7V7 166 aa12.3□□□□□ -0.44
VPS52-212ENST00000445902 MDKP21741 143 aaPredicted RBP12.3□□□□□ -0.44
VPS52-212ENST00000445902 FUT7Q11130 342 aa12.3□□□□□ -0.44
VPS52-212ENST00000445902 KLHL24Q6TFL4 600 aa12.3□□□□□ -0.44
VPS52-212ENST00000445902 ABHD12BQ7Z5M8 362 aaPredicted RBP12.3□□□□□ -0.44
VPS52-212ENST00000445902 SULF2Q8IWU5 870 aa12.3□□□□□ -0.44
VPS52-212ENST00000445902 ZFP62Q8NB50 900 aaPredicted RBP12.3□□□□□ -0.44
VPS52-212ENST00000445902 RSC1A1Q92681 617 aa12.3□□□□□ -0.44
VPS52-212ENST00000445902 DAZLQ92904 295 aaKnown RBP12.3□□□□□ -0.44
VPS52-212ENST00000445902 SLAMF6Q96DU3 332 aa12.3□□□□□ -0.44
VPS52-212ENST00000445902 LURAP1Q96LR2 239 aa12.3□□□□□ -0.44
VPS52-212ENST00000445902 C1orf147Q96MC9 270 aaPredicted RBP12.3□□□□□ -0.44
VPS52-212ENST00000445902 ZNF2Q9BSG1 426 aaPredicted RBP12.3□□□□□ -0.44
VPS52-212ENST00000445902 EMC6Q9BV81 110 aa12.3□□□□□ -0.44
VPS52-212ENST00000445902 SRPK3Q9UPE1 567 aa12.3□□□□□ -0.44
VPS52-212ENST00000445902 COL4A2P08572 1712 aa12.3□□□□□ -0.44
VPS52-212ENST00000445902 SCGNO76038 276 aa12.3□□□□□ -0.44
VPS52-212ENST00000445902 LINC00271P0C7V0 271 aa12.3□□□□□ -0.44
VPS52-212ENST00000445902 BTF3P20290 206 aaKnown RBP12.3□□□□□ -0.44
VPS52-212ENST00000445902 UCP2P55851 309 aa12.3□□□□□ -0.44
VPS52-212ENST00000445902 SLC26A5P58743 744 aa12.3□□□□□ -0.44
VPS52-212ENST00000445902 PKIAP61925 76 aa12.3□□□□□ -0.44
VPS52-212ENST00000445902 DLK1P80370 383 aa12.3□□□□□ -0.44
VPS52-212ENST00000445902 EMG1Q92979 244 aaKnown RBP12.3□□□□□ -0.44
VPS52-212ENST00000445902 TOMM40LQ969M1 308 aa12.3□□□□□ -0.44
VPS52-212ENST00000445902 CPNE4Q96A23 557 aaPredicted RBP12.3□□□□□ -0.44
VPS52-212ENST00000445902 MMABQ96EY8 250 aaPredicted RBP12.3□□□□□ -0.44
VPS52-212ENST00000445902 HDHD3Q9BSH5 251 aaPredicted RBP12.3□□□□□ -0.44
VPS52-212ENST00000445902 TMEM184BQ9Y519 407 aaPredicted RBP12.3□□□□□ -0.44
VPS52-212ENST00000445902 OR5H15A6NDH6 313 aa12.3□□□□□ -0.44
VPS52-212ENST00000445902 OR5H1A6NKK0 313 aa12.3□□□□□ -0.44
VPS52-212ENST00000445902 CLDN4O14493 209 aa12.3□□□□□ -0.44
VPS52-212ENST00000445902 PLPP3O14495 311 aa12.3□□□□□ -0.44
VPS52-212ENST00000445902 PHOX2AO14813 284 aa12.3□□□□□ -0.44
VPS52-212ENST00000445902 ADH1BP00325 375 aa12.3□□□□□ -0.44
VPS52-212ENST00000445902 FCARP24071 287 aa12.3□□□□□ -0.44
VPS52-212ENST00000445902 GJA4P35212 333 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms