RNA–Protein interactions for RNA: ENST00000444712.5

SNX13-204, Transcript of sorting nexin 13, humanhuman

TSL 5

Gene SNX13, Length 2,018 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-204ENST00000444712 MFNGO00587 321 aa13.6□□□□□ -0.23
SNX13-204ENST00000444712 CSTBP04080 98 aaKnown RBP13.6□□□□□ -0.23
SNX13-204ENST00000444712 RLN1P04808 185 aa13.6□□□□□ -0.23
SNX13-204ENST00000444712 TMEM225BP0DP42 221 aa13.6□□□□□ -0.23
SNX13-204ENST00000444712 RAD52P43351 418 aa13.6□□□□□ -0.23
SNX13-204ENST00000444712 FOXG1P55316 489 aaPredicted RBP13.6□□□□□ -0.23
SNX13-204ENST00000444712 PIAS4Q8N2W9 510 aaPredicted RBP13.6□□□□□ -0.23
SNX13-204ENST00000444712 SPICQ8N5J4 248 aa13.6□□□□□ -0.23
SNX13-204ENST00000444712 NUDCD2Q8WVJ2 157 aa13.6□□□□□ -0.23
SNX13-204ENST00000444712 ELL3Q9HB65 397 aaPredicted RBP13.6□□□□□ -0.23
SNX13-204ENST00000444712 PLSCR2Q9NRY7 297 aa13.6□□□□□ -0.23
SNX13-204ENST00000444712 ITGB1BP2Q9UKP3 347 aa13.6□□□□□ -0.23
SNX13-204ENST00000444712 ANAPC10Q9UM13 185 aa13.6□□□□□ -0.23
SNX13-204ENST00000444712 MED12LQ86YW9 2145 aa13.6□□□□□ -0.23
SNX13-204ENST00000444712 FAM230AA0A1W2PPH8 454 aa13.59□□□□□ -0.23
SNX13-204ENST00000444712 SERPINE3A8MV23 424 aa13.59□□□□□ -0.23
SNX13-204ENST00000444712 SOCS1O15524 211 aa13.59□□□□□ -0.23
SNX13-204ENST00000444712 HPXP02790 462 aa13.59□□□□□ -0.23
SNX13-204ENST00000444712 ANXA7P20073 488 aaKnown RBP13.59□□□□□ -0.23
SNX13-204ENST00000444712 CDK10Q15131 360 aa13.59□□□□□ -0.23
SNX13-204ENST00000444712 RSU1Q15404 277 aa13.59□□□□□ -0.23
SNX13-204ENST00000444712 SF3B4Q15427 424 aaKnown RBP eCLIP13.59□□□□□ -0.237e-7■■■□□ 17.3
SNX13-204ENST00000444712 OR2A2Q6IF42 318 aa13.59□□□□□ -0.23
SNX13-204ENST00000444712 IDO2Q6ZQW0 420 aa13.59□□□□□ -0.23
SNX13-204ENST00000444712 FAM214BQ7L5A3 538 aa13.59□□□□□ -0.23
SNX13-204ENST00000444712 MRPL21Q7Z2W9 205 aaKnown RBP13.59□□□□□ -0.23
SNX13-204ENST00000444712 CSNK2A3Q8NEV1 391 aa13.59□□□□□ -0.23
SNX13-204ENST00000444712 BCL2L2Q92843 193 aaPredicted RBP13.59□□□□□ -0.23
SNX13-204ENST00000444712 MRPS24Q96EL2 167 aaKnown RBP13.59□□□□□ -0.23
SNX13-204ENST00000444712 POM121L2Q96KW2 1035 aa13.59□□□□□ -0.23
SNX13-204ENST00000444712 TRIB1Q96RU8 372 aa13.59□□□□□ -0.23
SNX13-204ENST00000444712 REPIN1Q9BWE0 567 aaKnown RBP13.59□□□□□ -0.23
SNX13-204ENST00000444712 MYOZ1Q9NP98 299 aaPredicted RBP13.59□□□□□ -0.23
SNX13-204ENST00000444712 ZNF69Q9UC07 566 aa13.59□□□□□ -0.23
SNX13-204ENST00000444712 ELF5Q9UKW6 265 aaPredicted RBP13.59□□□□□ -0.23
SNX13-204ENST00000444712 OR14I1A6ND48 311 aa13.59□□□□□ -0.23
SNX13-204ENST00000444712 J3QW42 95 aa13.59□□□□□ -0.23
SNX13-204ENST00000444712 IL18BPO95998 194 aa13.59□□□□□ -0.23
SNX13-204ENST00000444712 NAT1P18440 290 aa13.59□□□□□ -0.23
SNX13-204ENST00000444712 CCNOP22674 350 aa13.59□□□□□ -0.23
SNX13-204ENST00000444712 PLCXD3Q63HM9 321 aa13.59□□□□□ -0.23
SNX13-204ENST00000444712 ASCL4Q6XD76 172 aa13.59□□□□□ -0.23
SNX13-204ENST00000444712 SLC36A1Q7Z2H8 476 aa13.59□□□□□ -0.23
SNX13-204ENST00000444712 C1QL2Q7Z5L3 287 aa13.59□□□□□ -0.23
SNX13-204ENST00000444712 PXT1Q8NFP0 134 aa13.59□□□□□ -0.23
SNX13-204ENST00000444712 ZFAND1Q8TCF1 268 aa13.59□□□□□ -0.23
SNX13-204ENST00000444712 WNT2BQ93097 391 aa13.59□□□□□ -0.23
SNX13-204ENST00000444712 POM121Q96HA1 1249 aa13.59□□□□□ -0.23
SNX13-204ENST00000444712 OCSTAMPQ9BR26 566 aa13.59□□□□□ -0.23
SNX13-204ENST00000444712 COL25A1Q9BXS0 654 aaPredicted RBP13.59□□□□□ -0.23
SNX13-204ENST00000444712 TINAGL1Q9GZM7 467 aaPredicted RBP13.59□□□□□ -0.23
SNX13-204ENST00000444712 IL36GQ9NZH8 169 aa13.59□□□□□ -0.23
SNX13-204ENST00000444712 NPTNQ9Y639 398 aa13.59□□□□□ -0.23
SNX13-204ENST00000444712 A0A1W2PP11 408 aa13.58□□□□□ -0.24
SNX13-204ENST00000444712 FOXI3A8MTJ6 420 aaPredicted RBP13.58□□□□□ -0.24
SNX13-204ENST00000444712 AHRRA9YTQ3 701 aa13.58□□□□□ -0.24
SNX13-204ENST00000444712 M0QYG6 137 aa13.58□□□□□ -0.24
SNX13-204ENST00000444712 IFNA6P05013 189 aa13.58□□□□□ -0.24
SNX13-204ENST00000444712 ZNF735P0CB33 412 aa13.58□□□□□ -0.24
SNX13-204ENST00000444712 TMEM50BP56557 158 aa13.58□□□□□ -0.24
SNX13-204ENST00000444712 ARFRP1Q13795 201 aa13.58□□□□□ -0.24
SNX13-204ENST00000444712 PLAC9Q5JTB6 97 aa13.58□□□□□ -0.24
SNX13-204ENST00000444712 MOB3CQ70IA8 216 aa13.58□□□□□ -0.24
SNX13-204ENST00000444712 ASCL5Q7RTU5 278 aa13.58□□□□□ -0.24
SNX13-204ENST00000444712 OR5L1Q8NGL2 311 aa13.58□□□□□ -0.24
SNX13-204ENST00000444712 SNIP1Q8TAD8 396 aaKnown RBP13.58□□□□□ -0.24
SNX13-204ENST00000444712 PIGCQ92535 297 aa13.58□□□□□ -0.24
SNX13-204ENST00000444712 ARHGAP5-AS1Q96IT6 56 aa13.58□□□□□ -0.24
SNX13-204ENST00000444712 SEC22CQ9BRL7 303 aa13.58□□□□□ -0.24
SNX13-204ENST00000444712 EIF3KQ9UBQ5 218 aaKnown RBP13.58□□□□□ -0.24
SNX13-204ENST00000444712 KCNK7Q9Y2U2 307 aa13.58□□□□□ -0.24
SNX13-204ENST00000444712 TMEM82A0PJX8 343 aa13.57□□□□□ -0.24
SNX13-204ENST00000444712 RGS13O14921 159 aa13.57□□□□□ -0.24
SNX13-204ENST00000444712 FABP7O15540 132 aa13.57□□□□□ -0.24
SNX13-204ENST00000444712 KLK10O43240 276 aa13.57□□□□□ -0.24
SNX13-204ENST00000444712 EFSO43281 561 aa13.57□□□□□ -0.24
SNX13-204ENST00000444712 SSX5O60225 188 aa13.57□□□□□ -0.24
SNX13-204ENST00000444712 HOXB1P14653 301 aaPredicted RBP13.57□□□□□ -0.24
SNX13-204ENST00000444712 BLVRBP30043 206 aaPredicted RBP13.57□□□□□ -0.24
SNX13-204ENST00000444712 RSPO4Q2I0M5 234 aaPredicted RBP13.57□□□□□ -0.24
SNX13-204ENST00000444712 TFAP2EQ6VUC0 442 aa13.57□□□□□ -0.24
SNX13-204ENST00000444712 ZDHHC22Q8N966 263 aa13.57□□□□□ -0.24
SNX13-204ENST00000444712 Q96M66 194 aa13.57□□□□□ -0.24
SNX13-204ENST00000444712 ZNF436Q9C0F3 470 aaPredicted RBP13.57□□□□□ -0.24
SNX13-204ENST00000444712 AKR7A2O43488 359 aa13.57□□□□□ -0.24
SNX13-204ENST00000444712 FCER2P06734 321 aa13.57□□□□□ -0.24
SNX13-204ENST00000444712 MRPL49Q13405 166 aaKnown RBP13.57□□□□□ -0.24
SNX13-204ENST00000444712 GK2Q14410 553 aaPredicted RBP13.57□□□□□ -0.24
SNX13-204ENST00000444712 GUSBP1Q15486 140 aa13.57□□□□□ -0.24
SNX13-204ENST00000444712 SEZ6L2Q6UXD5 910 aa13.57□□□□□ -0.24
SNX13-204ENST00000444712 ZSCAN4Q8NAM6 433 aaPredicted RBP13.57□□□□□ -0.24
SNX13-204ENST00000444712 OR4S1Q8NGB4 309 aa13.57□□□□□ -0.24
SNX13-204ENST00000444712 PECRQ9BY49 303 aa13.57□□□□□ -0.24
SNX13-204ENST00000444712 SLA2Q9H6Q3 261 aa13.57□□□□□ -0.24
SNX13-204ENST00000444712 ZNF503-AS2A6NEH8 195 aa13.56□□□□□ -0.24
SNX13-204ENST00000444712 HTR3BO95264 441 aa13.56□□□□□ -0.24
SNX13-204ENST00000444712 CST4P01036 141 aa13.56□□□□□ -0.24
SNX13-204ENST00000444712 CXCL3P19876 107 aa13.56□□□□□ -0.24
SNX13-204ENST00000444712 UBE2NP61088 152 aaKnown RBP13.56□□□□□ -0.24
SNX13-204ENST00000444712 CXADRP78310 365 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms