RNA–Protein interactions for RNA: ENST00000444237.2

SCN11A-202, Transcript of sodium voltage-gated channel alpha subunit 11, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SCN11A, Length 5,729 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11A-202ENST00000444237 CCL16O15467 120 aa4.63□□□□□ -1.67
SCN11A-202ENST00000444237 LCATP04180 440 aa4.63□□□□□ -1.67
SCN11A-202ENST00000444237 GUSBP08236 651 aa4.63□□□□□ -1.67
SCN11A-202ENST00000444237 BCL6P41182 706 aa4.63□□□□□ -1.67
SCN11A-202ENST00000444237 SLC6A12P48065 614 aa4.63□□□□□ -1.67
SCN11A-202ENST00000444237 ID2Q02363 134 aa4.63□□□□□ -1.67
SCN11A-202ENST00000444237 HIKESHIQ53FT3 197 aa4.63□□□□□ -1.67
SCN11A-202ENST00000444237 WBP2NLQ6ICG8 309 aa4.63□□□□□ -1.67
SCN11A-202ENST00000444237 Q6ZVL8 140 aa4.63□□□□□ -1.67
SCN11A-202ENST00000444237 CHST14Q8NCH0 376 aa4.63□□□□□ -1.67
SCN11A-202ENST00000444237 OR2Y1Q8NGV0 311 aa4.63□□□□□ -1.67
SCN11A-202ENST00000444237 ORAOV1Q8WV07 137 aa4.63□□□□□ -1.67
SCN11A-202ENST00000444237 SMIM8Q96KF7 97 aa4.63□□□□□ -1.67
SCN11A-202ENST00000444237 AMDHD1Q96NU7 426 aa4.63□□□□□ -1.67
SCN11A-202ENST00000444237 MSL2Q9HCI7 577 aa4.63□□□□□ -1.67
SCN11A-202ENST00000444237 OR1A1Q9P1Q5 309 aa4.63□□□□□ -1.67
SCN11A-202ENST00000444237 SLC5A6Q9Y289 635 aa4.63□□□□□ -1.67
SCN11A-202ENST00000444237 LAMTOR2Q9Y2Q5 125 aa4.63□□□□□ -1.67
SCN11A-202ENST00000444237 A6NCN8 305 aa4.63□□□□□ -1.67
SCN11A-202ENST00000444237 HOXA6P31267 233 aa4.63□□□□□ -1.67
SCN11A-202ENST00000444237 WASP42768 502 aa4.63□□□□□ -1.67
SCN11A-202ENST00000444237 RPS15AP62244 130 aaKnown RBP4.63□□□□□ -1.67
SCN11A-202ENST00000444237 RPS23P62266 143 aaKnown RBP4.63□□□□□ -1.67
SCN11A-202ENST00000444237 RNASEKQ6P5S7 137 aaKnown RBP4.63□□□□□ -1.67
SCN11A-202ENST00000444237 ZNF880Q6PDB4 577 aa4.63□□□□□ -1.67
SCN11A-202ENST00000444237 SLC25A26Q70HW3 274 aa4.63□□□□□ -1.67
SCN11A-202ENST00000444237 OR51A2Q8NGJ7 313 aa4.63□□□□□ -1.67
SCN11A-202ENST00000444237 PFN4Q8NHR9 129 aa4.63□□□□□ -1.67
SCN11A-202ENST00000444237 FGGYQ96C11 551 aa4.63□□□□□ -1.67
SCN11A-202ENST00000444237 KTI12Q96EK9 354 aaPredicted RBP4.63□□□□□ -1.67
SCN11A-202ENST00000444237 SGCZQ96LD1 299 aa4.63□□□□□ -1.67
SCN11A-202ENST00000444237 SOSTQ9BQB4 213 aa4.63□□□□□ -1.67
SCN11A-202ENST00000444237 BANF2Q9H503 90 aa4.63□□□□□ -1.67
SCN11A-202ENST00000444237 SLC52A3Q9NQ40 469 aa4.63□□□□□ -1.67
SCN11A-202ENST00000444237 TAAR2Q9P1P5 351 aa4.63□□□□□ -1.67
SCN11A-202ENST00000444237 IL36AQ9UHA7 158 aa4.63□□□□□ -1.67
SCN11A-202ENST00000444237 SF3B6Q9Y3B4 125 aaKnown RBP4.63□□□□□ -1.67
SCN11A-202ENST00000444237 A0A1B0GWA3 101 aa4.63□□□□□ -1.67
SCN11A-202ENST00000444237 SERTM1A2A2V5 107 aa4.63□□□□□ -1.67
SCN11A-202ENST00000444237 A6NNC1 897 aa4.63□□□□□ -1.67
SCN11A-202ENST00000444237 HIST1H2BKO60814 126 aa4.63□□□□□ -1.67
SCN11A-202ENST00000444237 SCGB2A1O75556 95 aa4.63□□□□□ -1.67
SCN11A-202ENST00000444237 CDS2O95674 445 aa4.63□□□□□ -1.67
SCN11A-202ENST00000444237 IGHEP01854 428 aa4.63□□□□□ -1.67
SCN11A-202ENST00000444237 CD1AP06126 327 aa4.63□□□□□ -1.67
SCN11A-202ENST00000444237 HIST1H2BJP06899 126 aa4.63□□□□□ -1.67
SCN11A-202ENST00000444237 PGA3P0DJD8 388 aa4.63□□□□□ -1.67
SCN11A-202ENST00000444237 ST6GAL1P15907 406 aa4.63□□□□□ -1.67
SCN11A-202ENST00000444237 HIST1H2BOP23527 126 aa4.63□□□□□ -1.67
SCN11A-202ENST00000444237 HIST1H2BBP33778 126 aa4.63□□□□□ -1.67
SCN11A-202ENST00000444237 PRRX1P54821 245 aa4.63□□□□□ -1.67
SCN11A-202ENST00000444237 PCBP3P57721 371 aaKnown RBP4.63□□□□□ -1.67
SCN11A-202ENST00000444237 HIST1H2BDP58876 126 aa4.63□□□□□ -1.67
SCN11A-202ENST00000444237 PFN3P60673 137 aa4.63□□□□□ -1.67
SCN11A-202ENST00000444237 HIST1H2BCP62807 126 aa4.63□□□□□ -1.67
SCN11A-202ENST00000444237 ACKR1Q16570 336 aa4.63□□□□□ -1.67
SCN11A-202ENST00000444237 HIST2H2BEQ16778 126 aa4.63□□□□□ -1.67
SCN11A-202ENST00000444237 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.63□□□□□ -1.67
SCN11A-202ENST00000444237 C1orf194Q5T5A4 169 aa4.63□□□□□ -1.67
SCN11A-202ENST00000444237 HEPN1Q6WQI6 88 aa4.63□□□□□ -1.67
SCN11A-202ENST00000444237 HTR3DQ70Z44 454 aa4.63□□□□□ -1.67
SCN11A-202ENST00000444237 ARIH2OSQ8N7S6 290 aa4.63□□□□□ -1.67
SCN11A-202ENST00000444237 ROBO4Q8WZ75 1007 aa4.63□□□□□ -1.67
SCN11A-202ENST00000444237 OVCA2Q8WZ82 227 aa4.63□□□□□ -1.67
SCN11A-202ENST00000444237 HIST1H2BHQ93079 126 aa4.63□□□□□ -1.67
SCN11A-202ENST00000444237 TM4SF18Q96CE8 201 aa4.63□□□□□ -1.67
SCN11A-202ENST00000444237 IL17FQ96PD4 163 aa4.63□□□□□ -1.67
SCN11A-202ENST00000444237 HIST1H2BNQ99877 126 aa4.63□□□□□ -1.67
SCN11A-202ENST00000444237 HIST1H2BMQ99879 126 aa4.63□□□□□ -1.67
SCN11A-202ENST00000444237 HIST1H2BLQ99880 126 aa4.63□□□□□ -1.67
SCN11A-202ENST00000444237 UTP23Q9BRU9 249 aaKnown RBP4.63□□□□□ -1.67
SCN11A-202ENST00000444237 GINS3Q9BRX5 216 aa4.63□□□□□ -1.67
SCN11A-202ENST00000444237 GLIPR2Q9H4G4 154 aa4.63□□□□□ -1.67
SCN11A-202ENST00000444237 LHX9Q9NQ69 397 aa4.63□□□□□ -1.67
SCN11A-202ENST00000444237 HAO2Q9NYQ3 351 aa4.63□□□□□ -1.67
SCN11A-202ENST00000444237 EMC9Q9Y3B6 208 aa4.63□□□□□ -1.67
SCN11A-202ENST00000444237 LOC107986453A0A1B0GWG9 222 aa4.62□□□□□ -1.67
SCN11A-202ENST00000444237 A8MWP6 167 aa4.62□□□□□ -1.67
SCN11A-202ENST00000444237 TRAPPC2LH3BP13 241 aa4.62□□□□□ -1.67
SCN11A-202ENST00000444237 HIST1H1CP16403 213 aaKnown RBP4.62□□□□□ -1.67
SCN11A-202ENST00000444237 GALNSP34059 522 aa4.62□□□□□ -1.67
SCN11A-202ENST00000444237 NPBWR2P48146 333 aa4.62□□□□□ -1.67
SCN11A-202ENST00000444237 TCTAP57738 103 aa4.62□□□□□ -1.67
SCN11A-202ENST00000444237 EMC4Q5J8M3 183 aa4.62□□□□□ -1.67
SCN11A-202ENST00000444237 OR8G2PQ6IF36 304 aa4.62□□□□□ -1.67
SCN11A-202ENST00000444237 ZNF774Q6NX45 483 aa4.62□□□□□ -1.67
SCN11A-202ENST00000444237 H1FOOQ8IZA3 346 aaPredicted RBP4.62□□□□□ -1.67
SCN11A-202ENST00000444237 OR5C1Q8NGR4 320 aa4.62□□□□□ -1.67
SCN11A-202ENST00000444237 ZNF480Q8WV37 535 aa4.62□□□□□ -1.67
SCN11A-202ENST00000444237 SCAMP4Q969E2 229 aa4.62□□□□□ -1.67
SCN11A-202ENST00000444237 SLAMF6Q96DU3 332 aa4.62□□□□□ -1.67
SCN11A-202ENST00000444237 P2RX4Q99571 388 aa4.62□□□□□ -1.67
SCN11A-202ENST00000444237 SIGMAR1Q99720 223 aa4.62□□□□□ -1.67
SCN11A-202ENST00000444237 NKX3-1Q99801 234 aaPredicted RBP4.62□□□□□ -1.67
SCN11A-202ENST00000444237 NRSN2Q9GZP1 204 aa4.62□□□□□ -1.67
SCN11A-202ENST00000444237 IL21Q9HBE4 155 aa4.62□□□□□ -1.67
SCN11A-202ENST00000444237 IL23AQ9NPF7 189 aa4.62□□□□□ -1.67
SCN11A-202ENST00000444237 CACNG4Q9UBN1 327 aa4.62□□□□□ -1.67
SCN11A-202ENST00000444237 TIMM10BQ9Y5J6 103 aa4.62□□□□□ -1.67
SCN11A-202ENST00000444237 IGKV6D-21A0A0A0MT36 114 aa4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms