RNA–Protein interactions for RNA: ENST00000439316.6

CLCNKA-203, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 2 BASIC

Gene CLCNKA, Length 1,997 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-203ENST00000439316 MST1LQ2TV78 715 aa14.4□□□□□ -0.1
CLCNKA-203ENST00000439316 GFOD2Q3B7J2 385 aa14.4□□□□□ -0.1
CLCNKA-203ENST00000439316 FAM69BQ5VUD6 431 aa14.4□□□□□ -0.1
CLCNKA-203ENST00000439316 LDLRAD3Q86YD5 345 aa14.4□□□□□ -0.1
CLCNKA-203ENST00000439316 OR4A4PQ8NGN8 299 aa14.4□□□□□ -0.1
CLCNKA-203ENST00000439316 SLC26A1Q9H2B4 701 aa14.4□□□□□ -0.1
CLCNKA-203ENST00000439316 HPF1Q9NWY4 346 aa14.4□□□□□ -0.1
CLCNKA-203ENST00000439316 GHRLQ9UBU3 117 aa14.4□□□□□ -0.1
CLCNKA-203ENST00000439316 NDRG3Q9UGV2 375 aa14.4□□□□□ -0.1
CLCNKA-203ENST00000439316 LOC102725191A0A1B0GVB3 256 aa14.4□□□□□ -0.1
CLCNKA-203ENST00000439316 E9PLN8 166 aa14.4□□□□□ -0.1
CLCNKA-203ENST00000439316 GDF9O60383 454 aa14.4□□□□□ -0.1
CLCNKA-203ENST00000439316 SCRG1O75711 98 aa14.4□□□□□ -0.1
CLCNKA-203ENST00000439316 OR2J2O76002 312 aa14.4□□□□□ -0.1
CLCNKA-203ENST00000439316 ZNF43P17038 809 aa14.4□□□□□ -0.1
CLCNKA-203ENST00000439316 ECH1Q13011 328 aa14.4□□□□□ -0.1
CLCNKA-203ENST00000439316 IL34Q6ZMJ4 242 aa14.4□□□□□ -0.1
CLCNKA-203ENST00000439316 CPEB2Q7Z5Q1 589 aaKnown RBP14.4□□□□□ -0.1
CLCNKA-203ENST00000439316 PNLDC1Q8NA58 520 aaKnown RBP14.4□□□□□ -0.1
CLCNKA-203ENST00000439316 OR51T1Q8NGJ9 327 aa14.4□□□□□ -0.1
CLCNKA-203ENST00000439316 SLC25A43Q8WUT9 341 aaPredicted RBP14.4□□□□□ -0.1
CLCNKA-203ENST00000439316 OR10C1Q96KK4 312 aa14.4□□□□□ -0.1
CLCNKA-203ENST00000439316 LYZL4Q96KX0 146 aa14.4□□□□□ -0.1
CLCNKA-203ENST00000439316 C2orf50Q96LR7 162 aa14.4□□□□□ -0.1
CLCNKA-203ENST00000439316 DNAJB11Q9UBS4 358 aa14.4□□□□□ -0.1
CLCNKA-203ENST00000439316 C5orf63A6NC05 138 aa14.39□□□□□ -0.11
CLCNKA-203ENST00000439316 CDX4O14627 284 aaPredicted RBP14.39□□□□□ -0.11
CLCNKA-203ENST00000439316 DKK1O94907 266 aa14.39□□□□□ -0.11
CLCNKA-203ENST00000439316 HPNP05981 417 aa14.39□□□□□ -0.11
CLCNKA-203ENST00000439316 NAT2P11245 290 aa14.39□□□□□ -0.11
CLCNKA-203ENST00000439316 KLK2P20151 261 aa14.39□□□□□ -0.11
CLCNKA-203ENST00000439316 ACP1P24666 158 aa14.39□□□□□ -0.11
CLCNKA-203ENST00000439316 THBS4P35443 961 aa14.39□□□□□ -0.11
CLCNKA-203ENST00000439316 OR3A2P47893 321 aa14.39□□□□□ -0.11
CLCNKA-203ENST00000439316 SNU13P55769 128 aaKnown RBP14.39□□□□□ -0.11
CLCNKA-203ENST00000439316 CSNK2A1P68400 391 aaPredicted RBP14.39□□□□□ -0.11
CLCNKA-203ENST00000439316 SRSF3P84103 164 aaKnown RBP14.39□□□□□ -0.11
CLCNKA-203ENST00000439316 HFEQ30201 348 aa14.39□□□□□ -0.11
CLCNKA-203ENST00000439316 ZNF585AQ6P3V2 769 aa14.39□□□□□ -0.11
CLCNKA-203ENST00000439316 FADS6Q8N9I5 356 aa14.39□□□□□ -0.11
CLCNKA-203ENST00000439316 CSNK2A3Q8NEV1 391 aa14.39□□□□□ -0.11
CLCNKA-203ENST00000439316 SLC22A8Q8TCC7 542 aa14.39□□□□□ -0.11
CLCNKA-203ENST00000439316 SLC5A7Q9GZV3 580 aa14.39□□□□□ -0.11
CLCNKA-203ENST00000439316 LPAR3Q9UBY5 353 aa14.39□□□□□ -0.11
CLCNKA-203ENST00000439316 HDGFL3Q9Y3E1 203 aa14.39□□□□□ -0.11
CLCNKA-203ENST00000439316 KNTC1P50748 2209 aa14.39□□□□□ -0.11
CLCNKA-203ENST00000439316 ZNF726A6NNF4 738 aa14.38□□□□□ -0.11
CLCNKA-203ENST00000439316 HTR3BO95264 441 aa14.38□□□□□ -0.11
CLCNKA-203ENST00000439316 CSTBP04080 98 aaKnown RBP14.38□□□□□ -0.11
CLCNKA-203ENST00000439316 PTGFRP43088 359 aa14.38□□□□□ -0.11
CLCNKA-203ENST00000439316 ZFP36L1Q07352 338 aaKnown RBP14.38□□□□□ -0.11
CLCNKA-203ENST00000439316 SURF2Q15527 256 aaPredicted RBP14.38□□□□□ -0.11
CLCNKA-203ENST00000439316 KISS1Q15726 138 aa14.38□□□□□ -0.11
CLCNKA-203ENST00000439316 C1QL2Q7Z5L3 287 aa14.38□□□□□ -0.11
CLCNKA-203ENST00000439316 PPP1R3BQ86XI6 285 aa14.38□□□□□ -0.11
CLCNKA-203ENST00000439316 OR51F2Q8NH61 342 aa14.38□□□□□ -0.11
CLCNKA-203ENST00000439316 ADAMTS17Q8TE56 1095 aa14.38□□□□□ -0.11
CLCNKA-203ENST00000439316 EMG1Q92979 244 aaKnown RBP14.38□□□□□ -0.11
CLCNKA-203ENST00000439316 PGAM5Q96HS1 289 aa14.38□□□□□ -0.11
CLCNKA-203ENST00000439316 CNTNAP3BQ96NU0 1288 aa14.38□□□□□ -0.11
CLCNKA-203ENST00000439316 ST6GALNAC5Q9BVH7 336 aa14.38□□□□□ -0.11
CLCNKA-203ENST00000439316 PECRQ9BY49 303 aa14.38□□□□□ -0.11
CLCNKA-203ENST00000439316 EHFQ9NZC4 300 aa14.38□□□□□ -0.11
CLCNKA-203ENST00000439316 KLF2Q9Y5W3 355 aaPredicted RBP14.38□□□□□ -0.11
CLCNKA-203ENST00000439316 FIGNL2A6NMB9 653 aa14.38□□□□□ -0.11
CLCNKA-203ENST00000439316 F8W036 122 aa14.38□□□□□ -0.11
CLCNKA-203ENST00000439316 ZNF806P0C7X5 589 aa14.38□□□□□ -0.11
CLCNKA-203ENST00000439316 PET100P0DJ07 73 aa14.38□□□□□ -0.11
CLCNKA-203ENST00000439316 SFTPDP35247 375 aa14.38□□□□□ -0.11
CLCNKA-203ENST00000439316 LSM6P62312 80 aaKnown RBP14.38□□□□□ -0.11
CLCNKA-203ENST00000439316 BLOC1S1P78537 153 aa14.38□□□□□ -0.11
CLCNKA-203ENST00000439316 DCDP81605 110 aaKnown RBP14.38□□□□□ -0.11
CLCNKA-203ENST00000439316 PJVKQ0ZLH3 352 aa14.38□□□□□ -0.11
CLCNKA-203ENST00000439316 RAB32Q13637 225 aa14.38□□□□□ -0.11
CLCNKA-203ENST00000439316 ZNF385CQ66K41 422 aaPredicted RBP14.38□□□□□ -0.11
CLCNKA-203ENST00000439316 WDSUB1Q8N9V3 476 aa14.38□□□□□ -0.11
CLCNKA-203ENST00000439316 OR5D18Q8NGL1 313 aa14.38□□□□□ -0.11
CLCNKA-203ENST00000439316 SPACA9Q96E40 222 aaPredicted RBP14.38□□□□□ -0.11
CLCNKA-203ENST00000439316 LIN37Q96GY3 246 aaPredicted RBP14.38□□□□□ -0.11
CLCNKA-203ENST00000439316 TM2D1Q9BX74 207 aa14.38□□□□□ -0.11
CLCNKA-203ENST00000439316 PMS2P1A4D2B8 440 aa14.37□□□□□ -0.11
CLCNKA-203ENST00000439316 PCNX2A6NKB5 2137 aa14.37□□□□□ -0.11
CLCNKA-203ENST00000439316 SERPINE3A8MV23 424 aa14.37□□□□□ -0.11
CLCNKA-203ENST00000439316 SDCBPO00560 298 aaPredicted RBP14.37□□□□□ -0.11
CLCNKA-203ENST00000439316 CA11O75493 328 aa14.37□□□□□ -0.11
CLCNKA-203ENST00000439316 ONECUT2O95948 504 aa14.37□□□□□ -0.11
CLCNKA-203ENST00000439316 CD59P13987 128 aa14.37□□□□□ -0.11
CLCNKA-203ENST00000439316 GLRA1P23415 457 aa14.37□□□□□ -0.11
CLCNKA-203ENST00000439316 ADH6P28332 368 aa14.37□□□□□ -0.11
CLCNKA-203ENST00000439316 EIF1P41567 113 aaKnown RBP14.37□□□□□ -0.11
CLCNKA-203ENST00000439316 ZNF84P51523 738 aa14.37□□□□□ -0.11
CLCNKA-203ENST00000439316 SLC35A1P78382 337 aa14.37□□□□□ -0.11
CLCNKA-203ENST00000439316 TMEM176BQ3YBM2 270 aaPredicted RBP14.37□□□□□ -0.11
CLCNKA-203ENST00000439316 DHRS7BQ6IAN0 325 aaPredicted RBP14.37□□□□□ -0.11
CLCNKA-203ENST00000439316 HAGHLQ6PII5 290 aaPredicted RBP14.37□□□□□ -0.11
CLCNKA-203ENST00000439316 SLC16A14Q7RTX9 510 aa14.37□□□□□ -0.11
CLCNKA-203ENST00000439316 SPSB2Q99619 263 aa14.37□□□□□ -0.11
CLCNKA-203ENST00000439316 MICU1Q9BPX6 476 aa14.37□□□□□ -0.11
CLCNKA-203ENST00000439316 METTL8Q9H825 291 aaKnown RBP14.37□□□□□ -0.11
CLCNKA-203ENST00000439316 V9GYS6 101 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms