RNA–Protein interactions for RNA: ENST00000433355.6

SHPRH-205, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 1 (best)

Gene SHPRH, Length 11,660 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-205ENST00000433355 PARM1Q6UWI2 310 aa3.35□□□□□ -1.87
SHPRH-205ENST00000433355 DNM1P46Q6ZS02 220 aa3.35□□□□□ -1.87
SHPRH-205ENST00000433355 OR4N2Q8NGD1 307 aa3.35□□□□□ -1.87
SHPRH-205ENST00000433355 OR4A4PQ8NGN8 299 aa3.35□□□□□ -1.87
SHPRH-205ENST00000433355 OR2AE1Q8NHA4 323 aa3.35□□□□□ -1.87
SHPRH-205ENST00000433355 NEK7Q8TDX7 302 aa3.35□□□□□ -1.87
SHPRH-205ENST00000433355 THEM6Q8WUY1 208 aa3.35□□□□□ -1.87
SHPRH-205ENST00000433355 TMIGD2Q96BF3 282 aa3.35□□□□□ -1.87
SHPRH-205ENST00000433355 AMDHD2Q9Y303 409 aa3.35□□□□□ -1.87
SHPRH-205ENST00000433355 A0A0G2JK05 382 aa3.35□□□□□ -1.87
SHPRH-205ENST00000433355 CORTO00230 105 aa3.35□□□□□ -1.87
SHPRH-205ENST00000433355 PLPP3O14495 311 aa3.35□□□□□ -1.87
SHPRH-205ENST00000433355 TRAF3IP2O43734 574 aaPredicted RBP3.35□□□□□ -1.87
SHPRH-205ENST00000433355 VENTXO95231 258 aa3.35□□□□□ -1.87
SHPRH-205ENST00000433355 ACP1P24666 158 aa3.35□□□□□ -1.87
SHPRH-205ENST00000433355 OR10A3P58181 314 aa3.35□□□□□ -1.87
SHPRH-205ENST00000433355 FAM74A1Q5RGS3 127 aa3.35□□□□□ -1.87
SHPRH-205ENST00000433355 LY6G6FQ5SQ64 297 aa3.35□□□□□ -1.87
SHPRH-205ENST00000433355 ZNF813Q6ZN06 617 aa3.35□□□□□ -1.87
SHPRH-205ENST00000433355 TMEM179BQ7Z7N9 219 aa3.35□□□□□ -1.87
SHPRH-205ENST00000433355 MUCL1Q96DR8 90 aa3.35□□□□□ -1.87
SHPRH-205ENST00000433355 TMEM222Q9H0R3 208 aa3.35□□□□□ -1.87
SHPRH-205ENST00000433355 MIR1-1HGQ9H1L0 117 aa3.35□□□□□ -1.87
SHPRH-205ENST00000433355 ARPC5O15511 151 aa3.35□□□□□ -1.87
SHPRH-205ENST00000433355 CHRNB1P11230 501 aa3.35□□□□□ -1.87
SHPRH-205ENST00000433355 LIFP15018 202 aa3.35□□□□□ -1.87
SHPRH-205ENST00000433355 TCEA1P23193 301 aaKnown RBP3.35□□□□□ -1.87
SHPRH-205ENST00000433355 OTX1P32242 354 aaPredicted RBP3.35□□□□□ -1.87
SHPRH-205ENST00000433355 CRYBA2P53672 197 aa3.35□□□□□ -1.87
SHPRH-205ENST00000433355 AKR1C8PQ5T2L2 129 aa3.35□□□□□ -1.87
SHPRH-205ENST00000433355 C18orf63Q68DL7 685 aa3.35□□□□□ -1.87
SHPRH-205ENST00000433355 TBPL2Q6SJ96 375 aa3.35□□□□□ -1.87
SHPRH-205ENST00000433355 ZNF574Q6ZN55 896 aaPredicted RBP3.35□□□□□ -1.87
SHPRH-205ENST00000433355 FCRLAQ7L513 359 aa3.35□□□□□ -1.87
SHPRH-205ENST00000433355 C20orf196Q8IYI0 205 aa3.35□□□□□ -1.87
SHPRH-205ENST00000433355 BPIFB2Q8N4F0 458 aa3.35□□□□□ -1.87
SHPRH-205ENST00000433355 OR10Z1Q8NGY1 313 aa3.35□□□□□ -1.87
SHPRH-205ENST00000433355 PAQR8Q8TEZ7 354 aa3.35□□□□□ -1.87
SHPRH-205ENST00000433355 ZNRF4Q8WWF5 429 aa3.35□□□□□ -1.87
SHPRH-205ENST00000433355 GIMAP1Q8WWP7 306 aa3.35□□□□□ -1.87
SHPRH-205ENST00000433355 PSMF1Q92530 271 aa3.35□□□□□ -1.87
SHPRH-205ENST00000433355 MR1Q95460 341 aa3.35□□□□□ -1.87
SHPRH-205ENST00000433355 PTPRSQ13332 1948 aa3.35□□□□□ -1.87
SHPRH-205ENST00000433355 H0Y980 276 aa3.35□□□□□ -1.87
SHPRH-205ENST00000433355 K7EQM0 130 aa3.35□□□□□ -1.87
SHPRH-205ENST00000433355 ZGLP1P0C6A0 271 aa3.35□□□□□ -1.87
SHPRH-205ENST00000433355 ATF1P18846 271 aa3.35□□□□□ -1.87
SHPRH-205ENST00000433355 PGFP49763 221 aa3.35□□□□□ -1.87
SHPRH-205ENST00000433355 MAZP56270 477 aaKnown RBP3.35□□□□□ -1.87
SHPRH-205ENST00000433355 ARTNQ5T4W7 220 aa3.35□□□□□ -1.87
SHPRH-205ENST00000433355 FBXW12Q6X9E4 464 aa3.35□□□□□ -1.87
SHPRH-205ENST00000433355 AAED1Q7RTV5 226 aa3.35□□□□□ -1.87
SHPRH-205ENST00000433355 MARC2Q969Z3 335 aa3.35□□□□□ -1.87
SHPRH-205ENST00000433355 MSI2Q96DH6 328 aaKnown RBP3.35□□□□□ -1.87
SHPRH-205ENST00000433355 CCDC120Q96HB5 630 aa3.35□□□□□ -1.87
SHPRH-205ENST00000433355 CITED4Q96RK1 184 aa3.35□□□□□ -1.87
SHPRH-205ENST00000433355 S1PR3Q99500 378 aa3.35□□□□□ -1.87
SHPRH-205ENST00000433355 C19orf12Q9NSK7 152 aa3.35□□□□□ -1.87
SHPRH-205ENST00000433355 FEZF1A0PJY2 475 aa3.35□□□□□ -1.87
SHPRH-205ENST00000433355 SORBS2O94875 1100 aaKnown RBP3.35□□□□□ -1.87
SHPRH-205ENST00000433355 ZP2Q05996 745 aa3.35□□□□□ -1.87
SHPRH-205ENST00000433355 MEF2CQ06413 473 aaPredicted RBP3.35□□□□□ -1.87
SHPRH-205ENST00000433355 VASNQ6EMK4 673 aa3.35□□□□□ -1.87
SHPRH-205ENST00000433355 KIRREL2Q6UWL6 708 aa3.35□□□□□ -1.87
SHPRH-205ENST00000433355 CLIP4Q8N3C7 705 aa3.35□□□□□ -1.87
SHPRH-205ENST00000433355 OR2AK2Q8NG84 335 aa3.35□□□□□ -1.87
SHPRH-205ENST00000433355 MRPL13Q9BYD1 178 aaKnown RBP3.35□□□□□ -1.87
SHPRH-205ENST00000433355 CXCL16Q9H2A7 254 aa3.35□□□□□ -1.87
SHPRH-205ENST00000433355 TMEM38BQ9NVV0 291 aa3.35□□□□□ -1.87
SHPRH-205ENST00000433355 RLIMQ9NVW2 624 aa3.35□□□□□ -1.87
SHPRH-205ENST00000433355 PLEK2Q9NYT0 353 aa3.35□□□□□ -1.87
SHPRH-205ENST00000433355 ZNF224Q9NZL3 707 aa3.35□□□□□ -1.87
SHPRH-205ENST00000433355 IL19Q9UHD0 177 aa3.35□□□□□ -1.87
SHPRH-205ENST00000433355 ITPR3Q14573 2671 aa3.35□□□□□ -1.87
SHPRH-205ENST00000433355 FLNAP21333 2647 aaKnown RBP3.35□□□□□ -1.87
SHPRH-205ENST00000433355 PGAM2P15259 253 aa3.35□□□□□ -1.87
SHPRH-205ENST00000433355 EN2P19622 333 aaPredicted RBP3.35□□□□□ -1.87
SHPRH-205ENST00000433355 CASP9P55211 416 aa3.35□□□□□ -1.87
SHPRH-205ENST00000433355 MLF1P58340 268 aa3.35□□□□□ -1.87
SHPRH-205ENST00000433355 FNDC7Q5VTL7 733 aa3.35□□□□□ -1.87
SHPRH-205ENST00000433355 OR5M10Q6IEU7 315 aa3.35□□□□□ -1.87
SHPRH-205ENST00000433355 SLC35E3Q7Z769 313 aa3.35□□□□□ -1.87
SHPRH-205ENST00000433355 OR4N5Q8IXE1 308 aa3.35□□□□□ -1.87
SHPRH-205ENST00000433355 OR10J5Q8NHC4 309 aa3.35□□□□□ -1.87
SHPRH-205ENST00000433355 RBPMSQ93062 196 aaKnown RBP3.35□□□□□ -1.87
SHPRH-205ENST00000433355 MARS2Q96GW9 593 aaKnown RBP3.35□□□□□ -1.87
SHPRH-205ENST00000433355 GDF15Q99988 308 aa3.35□□□□□ -1.87
SHPRH-205ENST00000433355 LHX9Q9NQ69 397 aa3.35□□□□□ -1.87
SHPRH-205ENST00000433355 MEN1O00255 615 aa3.34□□□□□ -1.87
SHPRH-205ENST00000433355 TNFSF15O95150 251 aa3.34□□□□□ -1.87
SHPRH-205ENST00000433355 FSTL3O95633 263 aa3.34□□□□□ -1.87
SHPRH-205ENST00000433355 CFIP05156 583 aa3.34□□□□□ -1.87
SHPRH-205ENST00000433355 AQP2P41181 271 aa3.34□□□□□ -1.87
SHPRH-205ENST00000433355 CCR6P51684 374 aa3.34□□□□□ -1.87
SHPRH-205ENST00000433355 CARD18P57730 90 aa3.34□□□□□ -1.87
SHPRH-205ENST00000433355 TMEM249Q2WGJ8 235 aa3.34□□□□□ -1.87
SHPRH-205ENST00000433355 TMEM176BQ3YBM2 270 aaPredicted RBP3.34□□□□□ -1.87
SHPRH-205ENST00000433355 IER5LQ5T953 404 aa3.34□□□□□ -1.87
SHPRH-205ENST00000433355 TMEM215Q68D42 235 aa3.34□□□□□ -1.87
SHPRH-205ENST00000433355 ASTLQ6HA08 431 aaPredicted RBP3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms