RNA–Protein interactions for RNA: ENST00000428962.2

THBS3-202, Transcript of thrombospondin 3, humanhuman

TSL 2

Gene THBS3, Length 1,833 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-202ENST00000428962 VAMP1P23763 118 aa11.97□□□□□ -0.49
THBS3-202ENST00000428962 GFRA1P56159 465 aa11.97□□□□□ -0.49
THBS3-202ENST00000428962 ZNF345Q14585 488 aa11.97□□□□□ -0.49
THBS3-202ENST00000428962 SNAI3Q3KNW1 292 aa11.97□□□□□ -0.49
THBS3-202ENST00000428962 ABHD17BQ5VST6 288 aa11.97□□□□□ -0.49
THBS3-202ENST00000428962 ZNF546Q86UE3 836 aa11.97□□□□□ -0.49
THBS3-202ENST00000428962 SLC51BQ86UW2 128 aa11.97□□□□□ -0.49
THBS3-202ENST00000428962 OR6K3Q8NGY3 331 aa11.97□□□□□ -0.49
THBS3-202ENST00000428962 PIGTQ969N2 578 aa11.97□□□□□ -0.49
THBS3-202ENST00000428962 TMEM45BQ96B21 275 aa11.97□□□□□ -0.49
THBS3-202ENST00000428962 SGK3Q96BR1 496 aa11.97□□□□□ -0.49
THBS3-202ENST00000428962 ZNF775Q96BV0 537 aaPredicted RBP11.97□□□□□ -0.49
THBS3-202ENST00000428962 REEP6Q96HR9 211 aa11.97□□□□□ -0.49
THBS3-202ENST00000428962 FAM117AQ9C073 453 aa11.97□□□□□ -0.49
THBS3-202ENST00000428962 ELL3Q9HB65 397 aaPredicted RBP11.97□□□□□ -0.49
THBS3-202ENST00000428962 MED12Q93074 2177 aa11.96□□□□□ -0.49
THBS3-202ENST00000428962 CEACAM18A8MTB9 384 aa11.96□□□□□ -0.49
THBS3-202ENST00000428962 FOXI3A8MTJ6 420 aaPredicted RBP11.96□□□□□ -0.49
THBS3-202ENST00000428962 EFSO43281 561 aa11.96□□□□□ -0.49
THBS3-202ENST00000428962 FARS2O95363 451 aaKnown RBP11.96□□□□□ -0.49
THBS3-202ENST00000428962 B4GALT1P15291 398 aa11.96□□□□□ -0.49
THBS3-202ENST00000428962 AKR1C4P17516 323 aa11.96□□□□□ -0.49
THBS3-202ENST00000428962 FPR2P25090 351 aa11.96□□□□□ -0.49
THBS3-202ENST00000428962 BLVRBP30043 206 aaPredicted RBP11.96□□□□□ -0.49
THBS3-202ENST00000428962 CALCRP30988 508 aa11.96□□□□□ -0.49
THBS3-202ENST00000428962 OR3A2P47893 321 aa11.96□□□□□ -0.49
THBS3-202ENST00000428962 HTR5AP47898 357 aa11.96□□□□□ -0.49
THBS3-202ENST00000428962 UBA52P62987 128 aaKnown RBP11.96□□□□□ -0.49
THBS3-202ENST00000428962 KRTAP27-1Q3LI81 207 aa11.96□□□□□ -0.49
THBS3-202ENST00000428962 NRN1LQ496H8 165 aa11.96□□□□□ -0.49
THBS3-202ENST00000428962 C11orf87Q6NUJ2 197 aa11.96□□□□□ -0.49
THBS3-202ENST00000428962 ZNF774Q6NX45 483 aa11.96□□□□□ -0.49
THBS3-202ENST00000428962 CRIP3Q6Q6R5 217 aa11.96□□□□□ -0.49
THBS3-202ENST00000428962 GALNTL5Q7Z4T8 443 aa11.96□□□□□ -0.49
THBS3-202ENST00000428962 RTN4RL2Q86UN3 420 aa11.96□□□□□ -0.49
THBS3-202ENST00000428962 SULF2Q8IWU5 870 aa11.96□□□□□ -0.49
THBS3-202ENST00000428962 MARCH1Q8TCQ1 289 aa11.96□□□□□ -0.49
THBS3-202ENST00000428962 PSMF1Q92530 271 aa11.96□□□□□ -0.49
THBS3-202ENST00000428962 PECRQ9BY49 303 aa11.96□□□□□ -0.49
THBS3-202ENST00000428962 PMS2P1A4D2B8 440 aa11.95□□□□□ -0.5
THBS3-202ENST00000428962 I3L521 148 aa11.95□□□□□ -0.5
THBS3-202ENST00000428962 OR2F2O95006 317 aa11.95□□□□□ -0.5
THBS3-202ENST00000428962 LCATP04180 440 aa11.95□□□□□ -0.5
THBS3-202ENST00000428962 HPNP05981 417 aa11.95□□□□□ -0.5
THBS3-202ENST00000428962 ZNF32P17041 273 aa11.95□□□□□ -0.5
THBS3-202ENST00000428962 DLSTP36957 453 aa11.95□□□□□ -0.5
THBS3-202ENST00000428962 STARP49675 285 aa11.95□□□□□ -0.5
THBS3-202ENST00000428962 FOXO1Q12778 655 aa11.95□□□□□ -0.5
THBS3-202ENST00000428962 OR2F1Q13607 317 aa11.95□□□□□ -0.5
THBS3-202ENST00000428962 CEACAM16Q2WEN9 425 aa11.95□□□□□ -0.5
THBS3-202ENST00000428962 TMEM128Q5BJH2 165 aa11.95□□□□□ -0.5
THBS3-202ENST00000428962 C1QL2Q7Z5L3 287 aa11.95□□□□□ -0.5
THBS3-202ENST00000428962 CSNK2A3Q8NEV1 391 aa11.95□□□□□ -0.5
THBS3-202ENST00000428962 TMEM185AQ8NFB2 350 aa11.95□□□□□ -0.5
THBS3-202ENST00000428962 CASTOR1Q8WTX7 329 aa11.95□□□□□ -0.5
THBS3-202ENST00000428962 ST8SIA4Q92187 359 aa11.95□□□□□ -0.5
THBS3-202ENST00000428962 METTL9Q9H1A3 318 aa11.95□□□□□ -0.5
THBS3-202ENST00000428962 GPR35Q9HC97 309 aa11.95□□□□□ -0.5
THBS3-202ENST00000428962 MED9Q9NWA0 146 aa11.95□□□□□ -0.5
THBS3-202ENST00000428962 PTPRZ1P23471 2315 aaPredicted RBP11.95□□□□□ -0.5
THBS3-202ENST00000428962 NCOA6Q14686 2063 aaPredicted RBP11.95□□□□□ -0.5
THBS3-202ENST00000428962 DMDP11532 3685 aa11.95□□□□□ -0.5
THBS3-202ENST00000428962 A0A1B0GW55 424 aa11.95□□□□□ -0.5
THBS3-202ENST00000428962 PDGFAP04085 211 aa11.95□□□□□ -0.5
THBS3-202ENST00000428962 DUX4L2P0CJ85 424 aa11.95□□□□□ -0.5
THBS3-202ENST00000428962 DUX4L3P0CJ86 424 aa11.95□□□□□ -0.5
THBS3-202ENST00000428962 DUX4L4P0CJ87 422 aa11.95□□□□□ -0.5
THBS3-202ENST00000428962 DUX4L5P0CJ88 424 aa11.95□□□□□ -0.5
THBS3-202ENST00000428962 DUX4L6P0CJ89 424 aa11.95□□□□□ -0.5
THBS3-202ENST00000428962 DUX4L7P0CJ90 424 aa11.95□□□□□ -0.5
THBS3-202ENST00000428962 MTCP1P56278 107 aa11.95□□□□□ -0.5
THBS3-202ENST00000428962 CLDN15P56746 228 aa11.95□□□□□ -0.5
THBS3-202ENST00000428962 AANATQ16613 207 aa11.95□□□□□ -0.5
THBS3-202ENST00000428962 SFRP5Q5T4F7 317 aa11.95□□□□□ -0.5
THBS3-202ENST00000428962 CDCP2Q5VXM1 449 aa11.95□□□□□ -0.5
THBS3-202ENST00000428962 PLXDC2Q6UX71 529 aa11.95□□□□□ -0.5
THBS3-202ENST00000428962 LHFPL2Q6ZUX7 228 aa11.95□□□□□ -0.5
THBS3-202ENST00000428962 ZNF100Q8IYN0 542 aa11.95□□□□□ -0.5
THBS3-202ENST00000428962 ADAD2Q8NCV1 583 aaKnown RBP11.95□□□□□ -0.5
THBS3-202ENST00000428962 OR2M7Q8NG81 312 aa11.95□□□□□ -0.5
THBS3-202ENST00000428962 OR10K1Q8NGX5 313 aa11.95□□□□□ -0.5
THBS3-202ENST00000428962 OR2H1Q9GZK4 316 aa11.95□□□□□ -0.5
THBS3-202ENST00000428962 GPR173Q9NS66 373 aa11.95□□□□□ -0.5
THBS3-202ENST00000428962 FOXJ2Q9P0K8 574 aa11.95□□□□□ -0.5
THBS3-202ENST00000428962 DUX4Q9UBX2 424 aa11.95□□□□□ -0.5
THBS3-202ENST00000428962 SESN1Q9Y6P5 492 aa11.95□□□□□ -0.5
THBS3-202ENST00000428962 RIF1Q5UIP0 2472 aaKnown RBP11.95□□□□□ -0.5
THBS3-202ENST00000428962 A0A0B4J2A0 478 aa11.94□□□□□ -0.5
THBS3-202ENST00000428962 KANTRA0A1W2PQU2 76 aa11.94□□□□□ -0.5
THBS3-202ENST00000428962 hCG_1807616A0A1W2PRN6 198 aa11.94□□□□□ -0.5
THBS3-202ENST00000428962 PINLYPA6NC86 204 aa11.94□□□□□ -0.5
THBS3-202ENST00000428962 FAM25EA8MYX2 175 aa11.94□□□□□ -0.5
THBS3-202ENST00000428962 CCSO14618 274 aa11.94□□□□□ -0.5
THBS3-202ENST00000428962 SHOXO15266 292 aa11.94□□□□□ -0.5
THBS3-202ENST00000428962 CSTBP04080 98 aaKnown RBP11.94□□□□□ -0.5
THBS3-202ENST00000428962 TMEM225BP0DP42 221 aa11.94□□□□□ -0.5
THBS3-202ENST00000428962 MPGP29372 298 aa11.94□□□□□ -0.5
THBS3-202ENST00000428962 NTF4P34130 210 aa11.94□□□□□ -0.5
THBS3-202ENST00000428962 ECI1P42126 302 aa11.94□□□□□ -0.5
THBS3-202ENST00000428962 SNU13P55769 128 aaKnown RBP11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms