RNA–Protein interactions for RNA: ENST00000428313.5

C9orf3-206, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best)

Gene C9orf3, Length 2,288 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-206ENST00000428313 TMEM14DPA8MWL7 114 aa14.22□□□□□ -0.13
C9orf3-206ENST00000428313 ECI1P42126 302 aa14.22□□□□□ -0.13
C9orf3-206ENST00000428313 PTCRAQ6ISU1 281 aaPredicted RBP14.22□□□□□ -0.13
C9orf3-206ENST00000428313 RNF44Q7L0R7 432 aa14.22□□□□□ -0.13
C9orf3-206ENST00000428313 SLC22A24Q8N4F4 322 aa14.22□□□□□ -0.13
C9orf3-206ENST00000428313 HIST1H2AAQ96QV6 131 aa14.22□□□□□ -0.13
C9orf3-206ENST00000428313 FAAP24Q9BTP7 215 aa14.22□□□□□ -0.13
C9orf3-206ENST00000428313 CABLES2Q9BTV7 478 aa14.22□□□□□ -0.13
C9orf3-206ENST00000428313 PCED1AQ9H1Q7 454 aa14.22□□□□□ -0.13
C9orf3-206ENST00000428313 HIPK2Q9H2X6 1198 aa14.22□□□□□ -0.13
C9orf3-206ENST00000428313 NCOR1P1Q9H4R4 102 aa14.22□□□□□ -0.13
C9orf3-206ENST00000428313 B9D1Q9UPM9 204 aa14.22□□□□□ -0.13
C9orf3-206ENST00000428313 MYOFQ9NZM1 2061 aa14.22□□□□□ -0.13
C9orf3-206ENST00000428313 MED19A0JLT2 244 aaPredicted RBP14.22□□□□□ -0.13
C9orf3-206ENST00000428313 MBPP02686 304 aaPredicted RBP14.22□□□□□ -0.13
C9orf3-206ENST00000428313 CEBPBP17676 345 aa14.22□□□□□ -0.13
C9orf3-206ENST00000428313 TAS2R46P59540 309 aa14.22□□□□□ -0.13
C9orf3-206ENST00000428313 IL13RA2Q14627 380 aa14.22□□□□□ -0.13
C9orf3-206ENST00000428313 ZNF141Q15928 474 aa14.22□□□□□ -0.13
C9orf3-206ENST00000428313 NCR3LG1Q68D85 454 aa14.22□□□□□ -0.13
C9orf3-206ENST00000428313 SLC26A10Q8NG04 563 aa14.22□□□□□ -0.13
C9orf3-206ENST00000428313 OR52N4Q8NGI2 321 aa14.22□□□□□ -0.13
C9orf3-206ENST00000428313 ZCCHC10Q8TBK6 192 aa14.22□□□□□ -0.13
C9orf3-206ENST00000428313 GAL3ST4Q96RP7 486 aa14.22□□□□□ -0.13
C9orf3-206ENST00000428313 DIRC2Q96SL1 478 aa14.22□□□□□ -0.13
C9orf3-206ENST00000428313 A0A1W2PPQ1 181 aa14.21□□□□□ -0.13
C9orf3-206ENST00000428313 ZNF860A6NHJ4 632 aa14.21□□□□□ -0.13
C9orf3-206ENST00000428313 SRSF10O75494 262 aaKnown RBP14.21□□□□□ -0.13
C9orf3-206ENST00000428313 SCGB1D2O95969 90 aa14.21□□□□□ -0.13
C9orf3-206ENST00000428313 ASAH2BP0C7U1 165 aa14.21□□□□□ -0.13
C9orf3-206ENST00000428313 ZNF888P0CJ79 500 aaPredicted RBP14.21□□□□□ -0.13
C9orf3-206ENST00000428313 BRS3P32247 399 aa14.21□□□□□ -0.13
C9orf3-206ENST00000428313 POLR2HP52434 150 aaKnown RBP14.21□□□□□ -0.13
C9orf3-206ENST00000428313 EMP2P54851 167 aa14.21□□□□□ -0.13
C9orf3-206ENST00000428313 RAB38P57729 211 aa14.21□□□□□ -0.13
C9orf3-206ENST00000428313 LCN10Q6JVE6 187 aa14.21□□□□□ -0.13
C9orf3-206ENST00000428313 TGIF2LYQ8IUE0 185 aa14.21□□□□□ -0.13
C9orf3-206ENST00000428313 FAM185AQ8N0U4 392 aa14.21□□□□□ -0.13
C9orf3-206ENST00000428313 OR2L3Q8NG85 312 aa14.21□□□□□ -0.13
C9orf3-206ENST00000428313 C8orf44Q96CB5 159 aa14.21□□□□□ -0.13
C9orf3-206ENST00000428313 PYGO2Q9BRQ0 406 aa14.21□□□□□ -0.13
C9orf3-206ENST00000428313 CHST11Q9NPF2 352 aa14.21□□□□□ -0.13
C9orf3-206ENST00000428313 GPR173Q9NS66 373 aa14.21□□□□□ -0.13
C9orf3-206ENST00000428313 POLR3KQ9Y2Y1 108 aaPredicted RBP14.21□□□□□ -0.13
C9orf3-206ENST00000428313 R4GMQ9 66 aa14.21□□□□□ -0.13
C9orf3-206ENST00000428313 FAM230AA0A1W2PPH8 454 aa14.21□□□□□ -0.14
C9orf3-206ENST00000428313 IL6RP08887 468 aaPredicted RBP14.21□□□□□ -0.14
C9orf3-206ENST00000428313 HIST1H1DP16402 221 aaKnown RBP14.21□□□□□ -0.14
C9orf3-206ENST00000428313 AMY2BP19961 511 aa14.21□□□□□ -0.14
C9orf3-206ENST00000428313 OR3A2P47893 321 aa14.21□□□□□ -0.14
C9orf3-206ENST00000428313 RPL29P47914 159 aaKnown RBP14.21□□□□□ -0.14
C9orf3-206ENST00000428313 C1orf189Q5VU69 101 aa14.21□□□□□ -0.14
C9orf3-206ENST00000428313 CLDND2Q8NHS1 167 aa14.21□□□□□ -0.14
C9orf3-206ENST00000428313 MRPL24Q96A35 216 aaKnown RBP14.21□□□□□ -0.14
C9orf3-206ENST00000428313 COX14Q96I36 57 aa14.21□□□□□ -0.14
C9orf3-206ENST00000428313 SERINC2Q96SA4 455 aa14.21□□□□□ -0.14
C9orf3-206ENST00000428313 AK3Q9UIJ7 227 aa14.21□□□□□ -0.14
C9orf3-206ENST00000428313 SLC5A6Q9Y289 635 aa14.21□□□□□ -0.14
C9orf3-206ENST00000428313 LRP12Q9Y561 859 aa14.21□□□□□ -0.14
C9orf3-206ENST00000428313 INSL5Q9Y5Q6 135 aa14.21□□□□□ -0.14
C9orf3-206ENST00000428313 SNRNP200O75643 2136 aaKnown RBP14.2□□□□□ -0.14
C9orf3-206ENST00000428313 NSG1A0A0A6YYJ2 146 aa14.2□□□□□ -0.14
C9orf3-206ENST00000428313 CDC14CA4D256 554 aa14.2□□□□□ -0.14
C9orf3-206ENST00000428313 MMP7P09237 267 aaPredicted RBP14.2□□□□□ -0.14
C9orf3-206ENST00000428313 CD82P27701 267 aa14.2□□□□□ -0.14
C9orf3-206ENST00000428313 SOX8P57073 446 aa14.2□□□□□ -0.14
C9orf3-206ENST00000428313 C1orf140Q5VVS0 124 aa14.2□□□□□ -0.14
C9orf3-206ENST00000428313 NPAS4Q8IUM7 802 aa14.2□□□□□ -0.14
C9orf3-206ENST00000428313 C10orf53Q8N6V4 93 aa14.2□□□□□ -0.14
C9orf3-206ENST00000428313 OR2G3Q8NGZ4 309 aa14.2□□□□□ -0.14
C9orf3-206ENST00000428313 DOK4Q8TEW6 326 aa14.2□□□□□ -0.14
C9orf3-206ENST00000428313 RELTQ969Z4 430 aa14.2□□□□□ -0.14
C9orf3-206ENST00000428313 OR51B6Q9H340 312 aa14.2□□□□□ -0.14
C9orf3-206ENST00000428313 P4HTMQ9NXG6 502 aa14.2□□□□□ -0.14
C9orf3-206ENST00000428313 SCN3AQ9NY46 2000 aa14.2□□□□□ -0.14
C9orf3-206ENST00000428313 HBE1P02100 147 aa14.2□□□□□ -0.14
C9orf3-206ENST00000428313 OR10J1P30954 320 aa14.2□□□□□ -0.14
C9orf3-206ENST00000428313 RPL18Q07020 188 aaKnown RBP14.2□□□□□ -0.14
C9orf3-206ENST00000428313 SGCGQ13326 291 aa14.2□□□□□ -0.14
C9orf3-206ENST00000428313 TRA2AQ13595 282 aaKnown RBP eCLIP14.2□□□□□ -0.14
C9orf3-206ENST00000428313 FAM53BQ14153 422 aa14.2□□□□□ -0.14
C9orf3-206ENST00000428313 ZNF266Q14584 549 aa14.2□□□□□ -0.14
C9orf3-206ENST00000428313 EXOSC7Q15024 291 aaKnown RBP14.2□□□□□ -0.14
C9orf3-206ENST00000428313 PRICKLE4Q2TBC4 344 aa14.2□□□□□ -0.14
C9orf3-206ENST00000428313 MRPL41Q8IXM3 137 aaKnown RBP14.2□□□□□ -0.14
C9orf3-206ENST00000428313 ARHGEF39Q8N4T4 335 aa14.2□□□□□ -0.14
C9orf3-206ENST00000428313 NT5CQ8TCD5 201 aa14.2□□□□□ -0.14
C9orf3-206ENST00000428313 LPAR5Q9H1C0 372 aa14.2□□□□□ -0.14
C9orf3-206ENST00000428313 MMP25Q9NPA2 562 aa14.2□□□□□ -0.14
C9orf3-206ENST00000428313 FKBP11Q9NYL4 201 aa14.2□□□□□ -0.14
C9orf3-206ENST00000428313 PADI1Q9ULC6 663 aa14.2□□□□□ -0.14
C9orf3-206ENST00000428313 GAB2Q9UQC2 676 aa14.2□□□□□ -0.14
C9orf3-206ENST00000428313 SIAH2O43255 324 aa14.19□□□□□ -0.14
C9orf3-206ENST00000428313 NSA2O95478 260 aaKnown RBP14.19□□□□□ -0.14
C9orf3-206ENST00000428313 PNMTP11086 282 aa14.19□□□□□ -0.14
C9orf3-206ENST00000428313 IRF2P14316 349 aa14.19□□□□□ -0.14
C9orf3-206ENST00000428313 CDKN1BP46527 198 aa14.19□□□□□ -0.14
C9orf3-206ENST00000428313 MGAT2Q10469 447 aa14.19□□□□□ -0.14
C9orf3-206ENST00000428313 PMS2P11Q13670 270 aa14.19□□□□□ -0.14
C9orf3-206ENST00000428313 MLF2Q15773 248 aaPredicted RBP14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms