RNA–Protein interactions for RNA: ENST00000428307.6

HDAC9-210, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,359 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-210ENST00000428307 MGAT4CQ9UBM8 478 aa9.03□□□□□ -0.96
HDAC9-210ENST00000428307 SCP2D1Q9UJQ7 156 aa9.03□□□□□ -0.96
HDAC9-210ENST00000428307 MGAT4AQ9UM21 535 aa9.03□□□□□ -0.96
HDAC9-210ENST00000428307 FAM172BPA6NC97 362 aa9.02□□□□□ -0.96
HDAC9-210ENST00000428307 CDK2AP1O14519 115 aa9.02□□□□□ -0.96
HDAC9-210ENST00000428307 EFSO43281 561 aa9.02□□□□□ -0.96
HDAC9-210ENST00000428307 IL18BPO95998 194 aa9.02□□□□□ -0.96
HDAC9-210ENST00000428307 PMP2P02689 132 aa9.02□□□□□ -0.96
HDAC9-210ENST00000428307 CD74P04233 296 aa9.02□□□□□ -0.96
HDAC9-210ENST00000428307 IL5P05113 134 aa9.02□□□□□ -0.96
HDAC9-210ENST00000428307 GABRR1P24046 479 aa9.02□□□□□ -0.96
HDAC9-210ENST00000428307 AGTR1P30556 359 aa9.02□□□□□ -0.96
HDAC9-210ENST00000428307 MECP2P51608 486 aaKnown RBP9.02□□□□□ -0.96
HDAC9-210ENST00000428307 CAMK2BQ13554 666 aa9.02□□□□□ -0.96
HDAC9-210ENST00000428307 ARFRP1Q13795 201 aa9.02□□□□□ -0.96
HDAC9-210ENST00000428307 CLVS2Q5SYC1 327 aa9.02□□□□□ -0.96
HDAC9-210ENST00000428307 C17orf107Q6ZR85 190 aa9.02□□□□□ -0.96
HDAC9-210ENST00000428307 P4HA3Q7Z4N8 544 aa9.02□□□□□ -0.96
HDAC9-210ENST00000428307 ASCC1Q8N9N2 400 aaKnown RBP9.02□□□□□ -0.96
HDAC9-210ENST00000428307 CCDC54Q8NEL0 328 aa9.02□□□□□ -0.96
HDAC9-210ENST00000428307 OR5M9Q8NGP3 310 aa9.02□□□□□ -0.96
HDAC9-210ENST00000428307 OR2T35Q8NGX2 323 aa9.02□□□□□ -0.96
HDAC9-210ENST00000428307 GRPEL2Q8TAA5 225 aa9.02□□□□□ -0.96
HDAC9-210ENST00000428307 BORCS8Q96FH0 119 aa9.02□□□□□ -0.96
HDAC9-210ENST00000428307 WDR89Q96FK6 387 aaPredicted RBP9.02□□□□□ -0.96
HDAC9-210ENST00000428307 MED30Q96HR3 178 aa9.02□□□□□ -0.96
HDAC9-210ENST00000428307 DLL4Q9NR61 685 aa9.02□□□□□ -0.96
HDAC9-210ENST00000428307 GHRLQ9UBU3 117 aa9.02□□□□□ -0.96
HDAC9-210ENST00000428307 TRAV17A0A0B4J275 112 aa9.02□□□□□ -0.97
HDAC9-210ENST00000428307 TMEM82A0PJX8 343 aa9.02□□□□□ -0.97
HDAC9-210ENST00000428307 OR14I1A6ND48 311 aa9.02□□□□□ -0.97
HDAC9-210ENST00000428307 DHRS7CA6NNS2 312 aa9.02□□□□□ -0.97
HDAC9-210ENST00000428307 NGFP01138 241 aa9.02□□□□□ -0.97
HDAC9-210ENST00000428307 ALDH3B1P43353 468 aa9.02□□□□□ -0.97
HDAC9-210ENST00000428307 RBP2P50120 134 aa9.02□□□□□ -0.97
HDAC9-210ENST00000428307 HLXQ14774 488 aaPredicted RBP9.02□□□□□ -0.97
HDAC9-210ENST00000428307 FBXW9Q5XUX1 488 aa9.02□□□□□ -0.97
HDAC9-210ENST00000428307 IGF2-ASQ6U949 168 aa9.02□□□□□ -0.97
HDAC9-210ENST00000428307 MOB3CQ70IA8 216 aa9.02□□□□□ -0.97
HDAC9-210ENST00000428307 NLRC3Q7RTR2 1065 aa9.02□□□□□ -0.97
HDAC9-210ENST00000428307 MUC20Q8N307 709 aaPredicted RBP9.02□□□□□ -0.97
HDAC9-210ENST00000428307 FAM89BQ8N5H3 189 aa9.02□□□□□ -0.97
HDAC9-210ENST00000428307 OR13C8Q8NGS7 320 aa9.02□□□□□ -0.97
HDAC9-210ENST00000428307 ZNF431Q8TF32 576 aaPredicted RBP9.02□□□□□ -0.97
HDAC9-210ENST00000428307 SPSB1Q96BD6 273 aa9.02□□□□□ -0.97
HDAC9-210ENST00000428307 ST6GALNAC5Q9BVH7 336 aa9.02□□□□□ -0.97
HDAC9-210ENST00000428307 PRDM14Q9GZV8 571 aa9.02□□□□□ -0.97
HDAC9-210ENST00000428307 OR51B6Q9H340 312 aa9.02□□□□□ -0.97
HDAC9-210ENST00000428307 RGCCQ9H4X1 137 aa9.02□□□□□ -0.97
HDAC9-210ENST00000428307 ZNF230Q9UIE0 474 aaPredicted RBP9.02□□□□□ -0.97
HDAC9-210ENST00000428307 KCNMB2Q9Y691 235 aa9.02□□□□□ -0.97
HDAC9-210ENST00000428307 DSPP15924 2871 aaKnown RBP9.02□□□□□ -0.97
HDAC9-210ENST00000428307 UBE2QL1A1L167 161 aa9.01□□□□□ -0.97
HDAC9-210ENST00000428307 SNRPGP15A8MWD9 76 aa9.01□□□□□ -0.97
HDAC9-210ENST00000428307 DISC1C4P0D8 188 aa9.01□□□□□ -0.97
HDAC9-210ENST00000428307 HTR3BO95264 441 aa9.01□□□□□ -0.97
HDAC9-210ENST00000428307 SIX6O95475 246 aa9.01□□□□□ -0.97
HDAC9-210ENST00000428307 CSTBP04080 98 aaKnown RBP9.01□□□□□ -0.97
HDAC9-210ENST00000428307 GSTP1P09211 210 aaKnown RBP9.01□□□□□ -0.97
HDAC9-210ENST00000428307 GK2Q14410 553 aaPredicted RBP9.01□□□□□ -0.97
HDAC9-210ENST00000428307 RSU1Q15404 277 aa9.01□□□□□ -0.97
HDAC9-210ENST00000428307 CNN3Q15417 329 aaKnown RBP9.01□□□□□ -0.97
HDAC9-210ENST00000428307 NKAPLQ5M9Q1 402 aa9.01□□□□□ -0.97
HDAC9-210ENST00000428307 PLCXD3Q63HM9 321 aa9.01□□□□□ -0.97
HDAC9-210ENST00000428307 IGFL2Q6UWQ7 119 aa9.01□□□□□ -0.97
HDAC9-210ENST00000428307 COLCA1Q6ZS62 124 aa9.01□□□□□ -0.97
HDAC9-210ENST00000428307 C6orf201Q7Z4U5 140 aa9.01□□□□□ -0.97
HDAC9-210ENST00000428307 OR4K15Q8NH41 348 aa9.01□□□□□ -0.97
HDAC9-210ENST00000428307 MAFIPQ8WZ33 124 aa9.01□□□□□ -0.97
HDAC9-210ENST00000428307 SNAPC3Q92966 411 aa9.01□□□□□ -0.97
HDAC9-210ENST00000428307 FBXW5Q969U6 566 aa9.01□□□□□ -0.97
HDAC9-210ENST00000428307 TRIB1Q96RU8 372 aa9.01□□□□□ -0.97
HDAC9-210ENST00000428307 SLC25A21Q9BQT8 299 aaPredicted RBP9.01□□□□□ -0.97
HDAC9-210ENST00000428307 NUDT16L1Q9BRJ7 211 aaKnown RBP9.01□□□□□ -0.97
HDAC9-210ENST00000428307 RANBP3Q9H6Z4 567 aaPredicted RBP9.01□□□□□ -0.97
HDAC9-210ENST00000428307 ZNF581Q9P0T4 197 aa9.01□□□□□ -0.97
HDAC9-210ENST00000428307 ZNF107Q9UII5 783 aaPredicted RBP9.01□□□□□ -0.97
HDAC9-210ENST00000428307 ZNF391Q9UJN7 358 aa9.01□□□□□ -0.97
HDAC9-210ENST00000428307 A0A1W2PR80 420 aa9.01□□□□□ -0.97
HDAC9-210ENST00000428307 ZNF850A8MQ14 1090 aa9.01□□□□□ -0.97
HDAC9-210ENST00000428307 ZNF891A8MT65 544 aaPredicted RBP9.01□□□□□ -0.97
HDAC9-210ENST00000428307 MFNGO00587 321 aa9.01□□□□□ -0.97
HDAC9-210ENST00000428307 XRCC2O43543 280 aa9.01□□□□□ -0.97
HDAC9-210ENST00000428307 TSC22D2O75157 780 aa9.01□□□□□ -0.97
HDAC9-210ENST00000428307 IFNA6P05013 189 aa9.01□□□□□ -0.97
HDAC9-210ENST00000428307 GSTT2P0CG29 244 aa9.01□□□□□ -0.97
HDAC9-210ENST00000428307 PRKACBP22694 351 aa9.01□□□□□ -0.97
HDAC9-210ENST00000428307 DNASE1P24855 282 aa9.01□□□□□ -0.97
HDAC9-210ENST00000428307 PLP2Q04941 152 aa9.01□□□□□ -0.97
HDAC9-210ENST00000428307 MEF2DQ14814 521 aa9.01□□□□□ -0.97
HDAC9-210ENST00000428307 OR8B8Q15620 311 aa9.01□□□□□ -0.97
HDAC9-210ENST00000428307 FAM189A2Q15884 450 aa9.01□□□□□ -0.97
HDAC9-210ENST00000428307 TAF9Q16594 264 aa9.01□□□□□ -0.97
HDAC9-210ENST00000428307 C2orf68Q2NKX9 166 aa9.01□□□□□ -0.97
HDAC9-210ENST00000428307 ATPAF1Q5TC12 328 aaPredicted RBP9.01□□□□□ -0.97
HDAC9-210ENST00000428307 TMEM42Q69YG0 159 aa9.01□□□□□ -0.97
HDAC9-210ENST00000428307 SEZ6L2Q6UXD5 910 aa9.01□□□□□ -0.97
HDAC9-210ENST00000428307 BATF2Q8N1L9 274 aa9.01□□□□□ -0.97
HDAC9-210ENST00000428307 STEAP2Q8NFT2 490 aa9.01□□□□□ -0.97
HDAC9-210ENST00000428307 ZNF629Q9UEG4 869 aaPredicted RBP9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms