RNA–Protein interactions for RNA: ENST00000426840.1

LINC01049-201, Transcript of long intergenic non-protein coding RNA 1049, humanhuman

TSL 1 (best) BASIC

Gene LINC01049, Length 742 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01049-201ENST00000426840 DHRS7CA6NNS2 312 aa6.25□□□□□ -1.41
LINC01049-201ENST00000426840 ZNF850A8MQ14 1090 aa6.25□□□□□ -1.41
LINC01049-201ENST00000426840 H3BSH0 61 aa6.25□□□□□ -1.41
LINC01049-201ENST00000426840 TPD52L2O43399 206 aaKnown RBP6.25□□□□□ -1.41
LINC01049-201ENST00000426840 SYT7O43581 403 aa6.25□□□□□ -1.41
LINC01049-201ENST00000426840 RGS10O43665 173 aa6.25□□□□□ -1.41
LINC01049-201ENST00000426840 CDC14BO60729 498 aa6.25□□□□□ -1.41
LINC01049-201ENST00000426840 MTRF1O75570 445 aaKnown RBP6.25□□□□□ -1.41
LINC01049-201ENST00000426840 ZFPL1O95159 310 aa6.25□□□□□ -1.41
LINC01049-201ENST00000426840 MT-ND2P03891 347 aa6.25□□□□□ -1.41
LINC01049-201ENST00000426840 UBCP0CG48 685 aaKnown RBP6.25□□□□□ -1.41
LINC01049-201ENST00000426840 FAHP16930 419 aa6.25□□□□□ -1.41
LINC01049-201ENST00000426840 TNFSF4P23510 183 aa6.25□□□□□ -1.41
LINC01049-201ENST00000426840 SRP9P49458 86 aaKnown RBP6.25□□□□□ -1.41
LINC01049-201ENST00000426840 WNT4P56705 351 aa6.25□□□□□ -1.41
LINC01049-201ENST00000426840 TMEM33P57088 247 aa6.25□□□□□ -1.41
LINC01049-201ENST00000426840 ACSM1Q08AH1 577 aa6.25□□□□□ -1.41
LINC01049-201ENST00000426840 PRDX4Q13162 271 aa6.25□□□□□ -1.41
LINC01049-201ENST00000426840 CDK5R1Q15078 307 aa6.25□□□□□ -1.41
LINC01049-201ENST00000426840 MPPED2Q15777 294 aa6.25□□□□□ -1.41
LINC01049-201ENST00000426840 MLANAQ16655 118 aa6.25□□□□□ -1.41
LINC01049-201ENST00000426840 CCDC58Q4VC31 144 aa6.25□□□□□ -1.41
LINC01049-201ENST00000426840 FAM76BQ5HYJ3 339 aa6.25□□□□□ -1.41
LINC01049-201ENST00000426840 DMKNQ6E0U4 476 aaPredicted RBP6.25□□□□□ -1.41
LINC01049-201ENST00000426840 CLEC2AQ6UVW9 174 aa6.25□□□□□ -1.41
LINC01049-201ENST00000426840 MOB3CQ70IA8 216 aa6.25□□□□□ -1.41
LINC01049-201ENST00000426840 WDR86Q86TI4 376 aa6.25□□□□□ -1.41
LINC01049-201ENST00000426840 COMMD2Q86X83 199 aa6.25□□□□□ -1.41
LINC01049-201ENST00000426840 C11orf53Q8IXP5 236 aa6.25□□□□□ -1.41
LINC01049-201ENST00000426840 CIARTQ8N365 385 aaPredicted RBP6.25□□□□□ -1.41
LINC01049-201ENST00000426840 LILRB2Q8N423 598 aa6.25□□□□□ -1.41
LINC01049-201ENST00000426840 SPERTQ8NA61 448 aa6.25□□□□□ -1.41
LINC01049-201ENST00000426840 CCDC54Q8NEL0 328 aa6.25□□□□□ -1.41
LINC01049-201ENST00000426840 HAVCR2Q8TDQ0 301 aa6.25□□□□□ -1.41
LINC01049-201ENST00000426840 OR5P3Q8WZ94 311 aa6.25□□□□□ -1.41
LINC01049-201ENST00000426840 DVL3Q92997 716 aaPredicted RBP6.25□□□□□ -1.41
LINC01049-201ENST00000426840 OR5M11Q96RB7 305 aa6.25□□□□□ -1.41
LINC01049-201ENST00000426840 SAP30LQ9HAJ7 183 aa6.25□□□□□ -1.41
LINC01049-201ENST00000426840 GCM1Q9NP62 436 aa6.25□□□□□ -1.41
LINC01049-201ENST00000426840 DLL4Q9NR61 685 aa6.25□□□□□ -1.41
LINC01049-201ENST00000426840 ZNF275Q9NSD4 429 aaPredicted RBP6.25□□□□□ -1.41
LINC01049-201ENST00000426840 TREM2Q9NZC2 230 aa6.25□□□□□ -1.41
LINC01049-201ENST00000426840 ERGIC3Q9Y282 383 aa6.25□□□□□ -1.41
LINC01049-201ENST00000426840 PIGLQ9Y2B2 252 aa6.25□□□□□ -1.41
LINC01049-201ENST00000426840 NOP16Q9Y3C1 178 aaKnown RBP6.25□□□□□ -1.41
LINC01049-201ENST00000426840 AKAP9Q99996 3911 aa6.25□□□□□ -1.41
LINC01049-201ENST00000426840 YLPM1P49750 1951 aaKnown RBP6.25□□□□□ -1.41
LINC01049-201ENST00000426840 IGHV3-64DA0A0J9YX35 117 aa6.24□□□□□ -1.41
LINC01049-201ENST00000426840 LOC107986453A0A1B0GWG9 222 aa6.24□□□□□ -1.41
LINC01049-201ENST00000426840 TMEM212A6NML5 194 aa6.24□□□□□ -1.41
LINC01049-201ENST00000426840 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.24□□□□□ -1.41
LINC01049-201ENST00000426840 NDUFS8O00217 210 aa6.24□□□□□ -1.41
LINC01049-201ENST00000426840 PLPP2O43688 288 aa6.24□□□□□ -1.41
LINC01049-201ENST00000426840 NRASP01111 189 aa6.24□□□□□ -1.41
LINC01049-201ENST00000426840 CD1AP06126 327 aa6.24□□□□□ -1.41
LINC01049-201ENST00000426840 GRPP07492 148 aa6.24□□□□□ -1.41
LINC01049-201ENST00000426840 CSF3P09919 207 aa6.24□□□□□ -1.41
LINC01049-201ENST00000426840 ZNF12P17014 697 aa6.24□□□□□ -1.41
LINC01049-201ENST00000426840 TNFRSF1AP19438 455 aa6.24□□□□□ -1.41
LINC01049-201ENST00000426840 ACHEP22303 614 aa6.24□□□□□ -1.41
LINC01049-201ENST00000426840 THBS2P35442 1172 aa6.24□□□□□ -1.41
LINC01049-201ENST00000426840 GNALP38405 381 aa6.24□□□□□ -1.41
LINC01049-201ENST00000426840 NR4A2P43354 598 aa6.24□□□□□ -1.41
LINC01049-201ENST00000426840 MAP2K4P45985 399 aa6.24□□□□□ -1.41
LINC01049-201ENST00000426840 SPHARQ15513 63 aa6.24□□□□□ -1.41
LINC01049-201ENST00000426840 CARTPTQ16568 116 aa6.24□□□□□ -1.41
LINC01049-201ENST00000426840 ZNF181Q2M3W8 571 aa6.24□□□□□ -1.41
LINC01049-201ENST00000426840 DMRTC1Q5HYR2 192 aa6.24□□□□□ -1.41
LINC01049-201ENST00000426840 CLVS2Q5SYC1 327 aa6.24□□□□□ -1.41
LINC01049-201ENST00000426840 PRAMEF6Q5VXH4 476 aa6.24□□□□□ -1.41
LINC01049-201ENST00000426840 PRSS48Q7RTY5 328 aa6.24□□□□□ -1.41
LINC01049-201ENST00000426840 ZNF676Q8N7Q3 588 aa6.24□□□□□ -1.41
LINC01049-201ENST00000426840 ZFP41Q8N8Y5 198 aa6.24□□□□□ -1.41
LINC01049-201ENST00000426840 OR5A2Q8NGI9 324 aa6.24□□□□□ -1.41
LINC01049-201ENST00000426840 OR51A4Q8NGJ6 313 aa6.24□□□□□ -1.41
LINC01049-201ENST00000426840 OR5AK2Q8NH90 309 aa6.24□□□□□ -1.41
LINC01049-201ENST00000426840 ZNF420Q8TAQ5 688 aaPredicted RBP6.24□□□□□ -1.41
LINC01049-201ENST00000426840 Q8TCH9 128 aa6.24□□□□□ -1.41
LINC01049-201ENST00000426840 HPSE2Q8WWQ2 592 aa6.24□□□□□ -1.41
LINC01049-201ENST00000426840 RGP1Q92546 391 aaPredicted RBP6.24□□□□□ -1.41
LINC01049-201ENST00000426840 CCL17Q92583 94 aa6.24□□□□□ -1.41
LINC01049-201ENST00000426840 ERGIC1Q969X5 290 aa6.24□□□□□ -1.41
LINC01049-201ENST00000426840 FGGYQ96C11 551 aa6.24□□□□□ -1.41
LINC01049-201ENST00000426840 C10orf35Q96D05 121 aa6.24□□□□□ -1.41
LINC01049-201ENST00000426840 ADAT3Q96EY9 351 aaPredicted RBP6.24□□□□□ -1.41
LINC01049-201ENST00000426840 RNF170Q96K19 258 aa6.24□□□□□ -1.41
LINC01049-201ENST00000426840 MICU1Q9BPX6 476 aa6.24□□□□□ -1.41
LINC01049-201ENST00000426840 PDCD1LG2Q9BQ51 273 aa6.24□□□□□ -1.41
LINC01049-201ENST00000426840 ADAT1Q9BUB4 502 aaKnown RBP6.24□□□□□ -1.41
LINC01049-201ENST00000426840 PAPOLGQ9BWT3 736 aaKnown RBP6.24□□□□□ -1.41
LINC01049-201ENST00000426840 REG4Q9BYZ8 158 aa6.24□□□□□ -1.41
LINC01049-201ENST00000426840 CHODLQ9H9P2 273 aa6.24□□□□□ -1.41
LINC01049-201ENST00000426840 C14orf119Q9NWQ9 140 aa6.24□□□□□ -1.41
LINC01049-201ENST00000426840 ENPP5Q9UJA9 477 aa6.24□□□□□ -1.41
LINC01049-201ENST00000426840 HHLA2Q9UM44 414 aa6.24□□□□□ -1.41
LINC01049-201ENST00000426840 PPP1R3CQ9UQK1 317 aa6.24□□□□□ -1.41
LINC01049-201ENST00000426840 TANC2Q9HCD6 1990 aa6.24□□□□□ -1.41
LINC01049-201ENST00000426840 TEX15Q9BXT5 2789 aa6.23□□□□□ -1.41
LINC01049-201ENST00000426840 KRTAP9-6A0A140TA67 174 aa6.23□□□□□ -1.41
LINC01049-201ENST00000426840 ZNF732B4DXR9 585 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms