RNA–Protein interactions for RNA: ENST00000423271.7

USB1-202, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,217 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-202ENST00000423271 ASB17Q8WXJ9 295 aa12.6□□□□□ -0.39
USB1-202ENST00000423271 OR8B4Q96RC9 309 aa12.6□□□□□ -0.39
USB1-202ENST00000423271 PAPOLGQ9BWT3 736 aaKnown RBP12.6□□□□□ -0.39
USB1-202ENST00000423271 SP140LQ9H930 580 aa12.6□□□□□ -0.39
USB1-202ENST00000423271 ERVK-18Q9QC07 812 aa12.6□□□□□ -0.39
USB1-202ENST00000423271 DUX4Q9UBX2 424 aa12.6□□□□□ -0.39
USB1-202ENST00000423271 IKZF2Q9UKS7 526 aa12.6□□□□□ -0.39
USB1-202ENST00000423271 RRP15Q9Y3B9 282 aaKnown RBP12.6□□□□□ -0.39
USB1-202ENST00000423271 WBP4O75554 376 aaKnown RBP12.59□□□□□ -0.39
USB1-202ENST00000423271 SFTPBP07988 381 aa12.59□□□□□ -0.39
USB1-202ENST00000423271 GNAO1P09471 354 aa12.59□□□□□ -0.39
USB1-202ENST00000423271 DBTP11182 482 aaKnown RBP12.59□□□□□ -0.39
USB1-202ENST00000423271 CFL1P23528 166 aaKnown RBP12.59□□□□□ -0.39
USB1-202ENST00000423271 ACKR3P25106 362 aa12.59□□□□□ -0.39
USB1-202ENST00000423271 NPY4RP50391 375 aa12.59□□□□□ -0.39
USB1-202ENST00000423271 AQP4P55087 323 aa12.59□□□□□ -0.39
USB1-202ENST00000423271 PSMA6P60900 246 aaKnown RBP12.59□□□□□ -0.39
USB1-202ENST00000423271 ROM1Q03395 351 aa12.59□□□□□ -0.39
USB1-202ENST00000423271 SLC9A3R2Q15599 337 aa12.59□□□□□ -0.39
USB1-202ENST00000423271 TEX36Q5VZQ5 186 aa12.59□□□□□ -0.39
USB1-202ENST00000423271 ZNF322Q6U7Q0 402 aaPredicted RBP12.59□□□□□ -0.39
USB1-202ENST00000423271 WDR82Q6UXN9 313 aa12.59□□□□□ -0.39
USB1-202ENST00000423271 ZNF679Q8IYX0 411 aa12.59□□□□□ -0.39
USB1-202ENST00000423271 FGFRL1Q8N441 504 aa12.59□□□□□ -0.39
USB1-202ENST00000423271 OR10H4Q8NGA5 316 aa12.59□□□□□ -0.39
USB1-202ENST00000423271 OR8B12Q8NGG6 310 aa12.59□□□□□ -0.39
USB1-202ENST00000423271 CNIH3Q8TBE1 160 aa12.59□□□□□ -0.39
USB1-202ENST00000423271 TAF15Q92804 592 aaKnown RBP eCLIP12.59□□□□□ -0.39
USB1-202ENST00000423271 ITPKCQ96DU7 683 aa12.59□□□□□ -0.39
USB1-202ENST00000423271 SEH1LQ96EE3 360 aa12.59□□□□□ -0.39
USB1-202ENST00000423271 LYZL4Q96KX0 146 aa12.59□□□□□ -0.39
USB1-202ENST00000423271 Q96MT0 163 aa12.59□□□□□ -0.39
USB1-202ENST00000423271 PCGF1Q9BSM1 259 aa12.59□□□□□ -0.39
USB1-202ENST00000423271 FGF23Q9GZV9 251 aaPredicted RBP12.59□□□□□ -0.39
USB1-202ENST00000423271 AMBNQ9NP70 447 aa12.59□□□□□ -0.39
USB1-202ENST00000423271 TRIM36Q9NQ86 728 aa12.59□□□□□ -0.39
USB1-202ENST00000423271 A0A1W2PQL4 384 aaPredicted RBP12.58□□□□□ -0.4
USB1-202ENST00000423271 SNTNA6NMZ2 147 aa12.58□□□□□ -0.4
USB1-202ENST00000423271 H0YAE9 185 aa12.58□□□□□ -0.4
USB1-202ENST00000423271 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.58□□□□□ -0.4
USB1-202ENST00000423271 J3QRE1 110 aa12.58□□□□□ -0.4
USB1-202ENST00000423271 RNASE1P07998 156 aaKnown RBP12.58□□□□□ -0.4
USB1-202ENST00000423271 OR2T7P0C7T2 308 aa12.58□□□□□ -0.4
USB1-202ENST00000423271 HKR1P10072 659 aa12.58□□□□□ -0.4
USB1-202ENST00000423271 MMP9P14780 707 aa12.58□□□□□ -0.4
USB1-202ENST00000423271 CFHR2P36980 270 aa12.58□□□□□ -0.4
USB1-202ENST00000423271 GNALP38405 381 aa12.58□□□□□ -0.4
USB1-202ENST00000423271 SMN1Q16637 294 aaKnown RBP12.58□□□□□ -0.4
USB1-202ENST00000423271 RUSC1-AS1Q66K80 236 aa12.58□□□□□ -0.4
USB1-202ENST00000423271 DEGS2Q6QHC5 323 aa12.58□□□□□ -0.4
USB1-202ENST00000423271 SETD9Q8NE22 299 aa12.58□□□□□ -0.4
USB1-202ENST00000423271 CSNK2A3Q8NEV1 391 aa12.58□□□□□ -0.4
USB1-202ENST00000423271 OR2T27Q8NH04 317 aa12.58□□□□□ -0.4
USB1-202ENST00000423271 LGALS12Q96DT0 336 aa12.58□□□□□ -0.4
USB1-202ENST00000423271 TBX15Q96SF7 602 aa12.58□□□□□ -0.4
USB1-202ENST00000423271 MROQ9BYG7 248 aa12.58□□□□□ -0.4
USB1-202ENST00000423271 RGCCQ9H4X1 137 aa12.58□□□□□ -0.4
USB1-202ENST00000423271 NIPAL2Q9H841 368 aa12.58□□□□□ -0.4
USB1-202ENST00000423271 ZMAT3Q9HA38 289 aaKnown RBP12.58□□□□□ -0.4
USB1-202ENST00000423271 MRM2Q9UI43 246 aaKnown RBP12.58□□□□□ -0.4
USB1-202ENST00000423271 MGAM2Q2M2H8 2515 aa12.58□□□□□ -0.4
USB1-202ENST00000423271 ZNF850A8MQ14 1090 aa12.57□□□□□ -0.4
USB1-202ENST00000423271 ZNF879B4DU55 563 aa12.57□□□□□ -0.4
USB1-202ENST00000423271 DVL1O14640 695 aa12.57□□□□□ -0.4
USB1-202ENST00000423271 CDIPTO14735 213 aa12.57□□□□□ -0.4
USB1-202ENST00000423271 TMPRSS2O15393 492 aa12.57□□□□□ -0.4
USB1-202ENST00000423271 NDUFA2O43678 99 aa12.57□□□□□ -0.4
USB1-202ENST00000423271 ZNF254O75437 659 aa12.57□□□□□ -0.4
USB1-202ENST00000423271 RIDAP52758 137 aaKnown RBP12.57□□□□□ -0.4
USB1-202ENST00000423271 ISL1P61371 349 aa12.57□□□□□ -0.4
USB1-202ENST00000423271 ZNF85Q03923 595 aa12.57□□□□□ -0.4
USB1-202ENST00000423271 PRDX4Q13162 271 aa12.57□□□□□ -0.4
USB1-202ENST00000423271 IL18R1Q13478 541 aa12.57□□□□□ -0.4
USB1-202ENST00000423271 DEFB112Q30KQ8 113 aa12.57□□□□□ -0.4
USB1-202ENST00000423271 WDR38Q5JTN6 314 aa12.57□□□□□ -0.4
USB1-202ENST00000423271 CD276Q5ZPR3 534 aa12.57□□□□□ -0.4
USB1-202ENST00000423271 PLEKHG7Q6ZR37 379 aa12.57□□□□□ -0.4
USB1-202ENST00000423271 C8orf59Q8N0T1 100 aaPredicted RBP12.57□□□□□ -0.4
USB1-202ENST00000423271 HPSE2Q8WWQ2 592 aa12.57□□□□□ -0.4
USB1-202ENST00000423271 TFAP2CQ92754 450 aa12.57□□□□□ -0.4
USB1-202ENST00000423271 CCL13Q99616 98 aa12.57□□□□□ -0.4
USB1-202ENST00000423271 MICU1Q9BPX6 476 aa12.57□□□□□ -0.4
USB1-202ENST00000423271 TLNRD1Q9H1K6 362 aa12.57□□□□□ -0.4
USB1-202ENST00000423271 FAM206AQ9NX38 181 aa12.57□□□□□ -0.4
USB1-202ENST00000423271 EXOGQ9Y2C4 368 aaKnown RBP12.57□□□□□ -0.4
USB1-202ENST00000423271 PCDHGB1Q9Y5G3 927 aa12.57□□□□□ -0.4
USB1-202ENST00000423271 H0YJX3 145 aa12.56□□□□□ -0.4
USB1-202ENST00000423271 CLDN34H7C241 214 aa12.56□□□□□ -0.4
USB1-202ENST00000423271 RRP9O43818 475 aaKnown RBP12.56□□□□□ -0.4
USB1-202ENST00000423271 TOX4O94842 621 aa12.56□□□□□ -0.4
USB1-202ENST00000423271 GMFBP60983 142 aa12.56□□□□□ -0.4
USB1-202ENST00000423271 ACTC1P68032 377 aa12.56□□□□□ -0.4
USB1-202ENST00000423271 ACTA1P68133 377 aa12.56□□□□□ -0.4
USB1-202ENST00000423271 EGR3Q06889 387 aa12.56□□□□□ -0.4
USB1-202ENST00000423271 MFGE8Q08431 387 aaPredicted RBP12.56□□□□□ -0.4
USB1-202ENST00000423271 ZNF684Q5T5D7 378 aa12.56□□□□□ -0.4
USB1-202ENST00000423271 GPR157Q5UAW9 335 aa12.56□□□□□ -0.4
USB1-202ENST00000423271 BTN2A1Q7KYR7 527 aa12.56□□□□□ -0.4
USB1-202ENST00000423271 FAM216BQ8N7L0 139 aa12.56□□□□□ -0.4
USB1-202ENST00000423271 ST8SIA4Q92187 359 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms