RNA–Protein interactions for RNA: ENST00000421712.1

BRAT1-202, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 3

Gene BRAT1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-202ENST00000421712 C19orf18Q8NEA5 215 aa13.25□□□□□ -0.29
BRAT1-202ENST00000421712 OR5A2Q8NGI9 324 aa13.25□□□□□ -0.29
BRAT1-202ENST00000421712 OR13C3Q8NGS6 347 aa13.25□□□□□ -0.29
BRAT1-202ENST00000421712 OR5AK2Q8NH90 309 aa13.25□□□□□ -0.29
BRAT1-202ENST00000421712 HPSE2Q8WWQ2 592 aa13.25□□□□□ -0.29
BRAT1-202ENST00000421712 RPL3LQ92901 407 aaKnown RBP13.25□□□□□ -0.29
BRAT1-202ENST00000421712 MSI2Q96DH6 328 aaKnown RBP13.25□□□□□ -0.29
BRAT1-202ENST00000421712 Q9H521 79 aa13.25□□□□□ -0.29
BRAT1-202ENST00000421712 ZNF665Q9H7R5 613 aa13.25□□□□□ -0.29
BRAT1-202ENST00000421712 BABAM2Q9NXR7 383 aa13.25□□□□□ -0.29
BRAT1-202ENST00000421712 ERVK-18Q9QC07 812 aa13.25□□□□□ -0.29
BRAT1-202ENST00000421712 HHLA2Q9UM44 414 aa13.25□□□□□ -0.29
BRAT1-202ENST00000421712 SLC7A11Q9UPY5 501 aa13.25□□□□□ -0.29
BRAT1-202ENST00000421712 ERGIC3Q9Y282 383 aa13.25□□□□□ -0.29
BRAT1-202ENST00000421712 PPIAL4AQ9Y536 164 aa13.25□□□□□ -0.29
BRAT1-202ENST00000421712 ANKRD61A6NGH8 418 aa13.24□□□□□ -0.29
BRAT1-202ENST00000421712 OR5B21A6NL26 309 aa13.24□□□□□ -0.29
BRAT1-202ENST00000421712 TMEM212A6NML5 194 aa13.24□□□□□ -0.29
BRAT1-202ENST00000421712 CDIPTO14735 213 aa13.24□□□□□ -0.29
BRAT1-202ENST00000421712 GATBO75879 557 aaKnown RBP13.24□□□□□ -0.29
BRAT1-202ENST00000421712 PTBP3O95758 552 aaKnown RBP13.24□□□□□ -0.29
BRAT1-202ENST00000421712 OCM2P0CE71 109 aa13.24□□□□□ -0.29
BRAT1-202ENST00000421712 OCMP0CE72 109 aaPredicted RBP13.24□□□□□ -0.29
BRAT1-202ENST00000421712 ZNF16P17020 682 aaPredicted RBP13.24□□□□□ -0.29
BRAT1-202ENST00000421712 TGM4P49221 684 aa13.24□□□□□ -0.29
BRAT1-202ENST00000421712 GMFBP60983 142 aa13.24□□□□□ -0.29
BRAT1-202ENST00000421712 LMO4P61968 165 aa13.24□□□□□ -0.29
BRAT1-202ENST00000421712 RPL22L1Q6P5R6 122 aaKnown RBP13.24□□□□□ -0.29
BRAT1-202ENST00000421712 WDR86Q86TI4 376 aa13.24□□□□□ -0.29
BRAT1-202ENST00000421712 MUC20Q8N307 709 aaPredicted RBP13.24□□□□□ -0.29
BRAT1-202ENST00000421712 LINC01356Q8N9X3 169 aa13.24□□□□□ -0.29
BRAT1-202ENST00000421712 OR52N1Q8NH53 320 aa13.24□□□□□ -0.29
BRAT1-202ENST00000421712 NPRL2Q8WTW4 380 aa13.24□□□□□ -0.29
BRAT1-202ENST00000421712 LRRC29Q8WV35 223 aa13.24□□□□□ -0.29
BRAT1-202ENST00000421712 FGGYQ96C11 551 aa13.24□□□□□ -0.29
BRAT1-202ENST00000421712 ZNF184Q99676 751 aaPredicted RBP13.24□□□□□ -0.29
BRAT1-202ENST00000421712 PDCD1LG2Q9BQ51 273 aa13.24□□□□□ -0.29
BRAT1-202ENST00000421712 METTL17Q9H7H0 456 aaPredicted RBP13.24□□□□□ -0.29
BRAT1-202ENST00000421712 LPAR2Q9HBW0 351 aa13.24□□□□□ -0.29
BRAT1-202ENST00000421712 TRIM36Q9NQ86 728 aa13.24□□□□□ -0.29
BRAT1-202ENST00000421712 FAM230AA0A1W2PPH8 454 aa13.23□□□□□ -0.29
BRAT1-202ENST00000421712 B4DSR2 109 aa13.23□□□□□ -0.29
BRAT1-202ENST00000421712 C3orf80F5H4A9 247 aa13.23□□□□□ -0.29
BRAT1-202ENST00000421712 ZFPL1O95159 310 aa13.23□□□□□ -0.29
BRAT1-202ENST00000421712 CDK1P06493 297 aa13.23□□□□□ -0.29
BRAT1-202ENST00000421712 RPSAP08865 295 aaKnown RBP13.23□□□□□ -0.29
BRAT1-202ENST00000421712 CD80P33681 288 aa13.23□□□□□ -0.29
BRAT1-202ENST00000421712 KRTAP1-1Q07627 177 aa13.23□□□□□ -0.29
BRAT1-202ENST00000421712 CCDC58Q4VC31 144 aa13.23□□□□□ -0.29
BRAT1-202ENST00000421712 TMEM155Q4W5P6 130 aa13.23□□□□□ -0.29
BRAT1-202ENST00000421712 FAM166AQ6J272 317 aa13.23□□□□□ -0.29
BRAT1-202ENST00000421712 Q6ZSR3 168 aa13.23□□□□□ -0.29
BRAT1-202ENST00000421712 KRT74Q7RTS7 529 aa13.23□□□□□ -0.29
BRAT1-202ENST00000421712 C11orf53Q8IXP5 236 aa13.23□□□□□ -0.29
BRAT1-202ENST00000421712 SCCPDHQ8NBX0 429 aa13.23□□□□□ -0.29
BRAT1-202ENST00000421712 TRMT10AQ8TBZ6 339 aaKnown RBP13.23□□□□□ -0.29
BRAT1-202ENST00000421712 TSEN15Q8WW01 171 aaKnown RBP13.23□□□□□ -0.29
BRAT1-202ENST00000421712 C10orf35Q96D05 121 aa13.23□□□□□ -0.29
BRAT1-202ENST00000421712 FGF23Q9GZV9 251 aaPredicted RBP13.23□□□□□ -0.29
BRAT1-202ENST00000421712 TMEM165Q9HC07 324 aa13.23□□□□□ -0.29
BRAT1-202ENST00000421712 TRAV38-1A0A0B4J264 116 aa13.22□□□□□ -0.29
BRAT1-202ENST00000421712 FAM157AC9JC47 383 aa13.22□□□□□ -0.29
BRAT1-202ENST00000421712 LGALS8O00214 317 aa13.22□□□□□ -0.29
BRAT1-202ENST00000421712 IGHV2-5P01817 119 aa13.22□□□□□ -0.29
BRAT1-202ENST00000421712 EEF1B2P24534 225 aaKnown RBP13.22□□□□□ -0.29
BRAT1-202ENST00000421712 HOXA4Q00056 320 aaPredicted RBP13.22□□□□□ -0.29
BRAT1-202ENST00000421712 CDK5R1Q15078 307 aa13.22□□□□□ -0.29
BRAT1-202ENST00000421712 KCNJ8Q15842 424 aa13.22□□□□□ -0.29
BRAT1-202ENST00000421712 TMEM42Q69YG0 159 aa13.22□□□□□ -0.29
BRAT1-202ENST00000421712 XAF1Q6GPH4 301 aa13.22□□□□□ -0.29
BRAT1-202ENST00000421712 HAGHLQ6PII5 290 aaPredicted RBP13.22□□□□□ -0.29
BRAT1-202ENST00000421712 WDR82Q6UXN9 313 aa13.22□□□□□ -0.29
BRAT1-202ENST00000421712 ZFP41Q8N8Y5 198 aa13.22□□□□□ -0.29
BRAT1-202ENST00000421712 OR51A4Q8NGJ6 313 aa13.22□□□□□ -0.29
BRAT1-202ENST00000421712 OR10AC1Q8NH08 325 aa13.22□□□□□ -0.29
BRAT1-202ENST00000421712 ZNF671Q8TAW3 534 aa13.22□□□□□ -0.29
BRAT1-202ENST00000421712 PP6455Q8WZ26 134 aa13.22□□□□□ -0.29
BRAT1-202ENST00000421712 ADAT3Q96EY9 351 aaPredicted RBP13.22□□□□□ -0.29
BRAT1-202ENST00000421712 CCDC90BQ9GZT6 254 aa13.22□□□□□ -0.29
BRAT1-202ENST00000421712 OR51I2Q9H344 312 aa13.22□□□□□ -0.29
BRAT1-202ENST00000421712 FKBP14Q9NWM8 211 aa13.22□□□□□ -0.29
BRAT1-202ENST00000421712 KCNS2Q9ULS6 477 aa13.22□□□□□ -0.29
BRAT1-202ENST00000421712 DHDHQ9UQ10 334 aa13.22□□□□□ -0.29
BRAT1-202ENST00000421712 IGHV3OR15-7A0A075B7D8 119 aa13.21□□□□□ -0.29
BRAT1-202ENST00000421712 PNMA8CA0A1B0GUJ8 204 aa13.21□□□□□ -0.29
BRAT1-202ENST00000421712 OOEPA6NGQ2 149 aa13.21□□□□□ -0.29
BRAT1-202ENST00000421712 CEACAM18A8MTB9 384 aa13.21□□□□□ -0.29
BRAT1-202ENST00000421712 A8MV72 311 aaPredicted RBP13.21□□□□□ -0.29
BRAT1-202ENST00000421712 RPS2P15880 293 aaKnown RBP13.21□□□□□ -0.29
BRAT1-202ENST00000421712 HAAOP46952 286 aa13.21□□□□□ -0.29
BRAT1-202ENST00000421712 WNT4P56705 351 aa13.21□□□□□ -0.29
BRAT1-202ENST00000421712 UBE2V2Q15819 145 aa13.21□□□□□ -0.29
BRAT1-202ENST00000421712 ZNF404Q494X3 552 aa13.21□□□□□ -0.29
BRAT1-202ENST00000421712 FAM76BQ5HYJ3 339 aa13.21□□□□□ -0.29
BRAT1-202ENST00000421712 ZNF573Q86YE8 665 aa13.21□□□□□ -0.29
BRAT1-202ENST00000421712 NANOGP1Q8N7R0 232 aa13.21□□□□□ -0.29
BRAT1-202ENST00000421712 OR51F2Q8NH61 342 aa13.21□□□□□ -0.29
BRAT1-202ENST00000421712 TECTBQ96PL2 329 aa13.21□□□□□ -0.29
BRAT1-202ENST00000421712 TMEM246Q9BRR3 403 aa13.21□□□□□ -0.29
BRAT1-202ENST00000421712 MND1Q9BWT6 205 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms