RNA–Protein interactions for RNA: ENST00000418170.5

HMGXB4-202, Transcript of HMG-box containing 4, humanhuman

TSL 1 (best)

Gene HMGXB4, Length 4,216 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-202ENST00000418170 PRSS41Q7RTY9 318 aa7.09□□□□□ -1.27
HMGXB4-202ENST00000418170 FGGYQ96C11 551 aa7.09□□□□□ -1.27
HMGXB4-202ENST00000418170 KTI12Q96EK9 354 aaPredicted RBP7.09□□□□□ -1.27
HMGXB4-202ENST00000418170 ADGRG7Q96K78 797 aa7.09□□□□□ -1.27
HMGXB4-202ENST00000418170 VSTM2LQ96N03 204 aa7.09□□□□□ -1.27
HMGXB4-202ENST00000418170 TIMM29Q9BSF4 260 aa7.09□□□□□ -1.27
HMGXB4-202ENST00000418170 KIAA1456Q9P272 454 aa7.09□□□□□ -1.27
HMGXB4-202ENST00000418170 WNT6Q9Y6F9 365 aa7.09□□□□□ -1.27
HMGXB4-202ENST00000418170 IGLV1-36A0A0B4J1U3 117 aa7.09□□□□□ -1.27
HMGXB4-202ENST00000418170 B4DEV8 164 aa7.09□□□□□ -1.27
HMGXB4-202ENST00000418170 SCGB1D2O95969 90 aa7.09□□□□□ -1.27
HMGXB4-202ENST00000418170 KNG1P01042 644 aa7.09□□□□□ -1.27
HMGXB4-202ENST00000418170 GCGP01275 180 aa7.09□□□□□ -1.27
HMGXB4-202ENST00000418170 VEGFBP49765 207 aa7.09□□□□□ -1.27
HMGXB4-202ENST00000418170 RND2P52198 227 aa7.09□□□□□ -1.27
HMGXB4-202ENST00000418170 GLO1Q04760 184 aa7.09□□□□□ -1.27
HMGXB4-202ENST00000418170 ELAVL3Q14576 367 aaKnown RBP7.09□□□□□ -1.27
HMGXB4-202ENST00000418170 C1orf140Q5VVS0 124 aa7.09□□□□□ -1.27
HMGXB4-202ENST00000418170 ABLIM2Q6H8Q1 611 aa7.09□□□□□ -1.27
HMGXB4-202ENST00000418170 SPSB3Q6PJ21 355 aa7.09□□□□□ -1.27
HMGXB4-202ENST00000418170 C9orf40Q8IXQ3 194 aa7.09□□□□□ -1.27
HMGXB4-202ENST00000418170 C14orf166Q9Y224 244 aaKnown RBP7.09□□□□□ -1.27
HMGXB4-202ENST00000418170 MRPS2Q9Y399 296 aaKnown RBP7.09□□□□□ -1.27
HMGXB4-202ENST00000418170 GOLT1BQ9Y3E0 138 aa7.09□□□□□ -1.27
HMGXB4-202ENST00000418170 FRYLO94915 3013 aa7.09□□□□□ -1.28
HMGXB4-202ENST00000418170 PRSS37A4D1T9 235 aa7.09□□□□□ -1.28
HMGXB4-202ENST00000418170 PRR19A6NJB7 356 aa7.09□□□□□ -1.28
HMGXB4-202ENST00000418170 M0R143 59 aa7.09□□□□□ -1.28
HMGXB4-202ENST00000418170 SDCBPO00560 298 aaPredicted RBP7.09□□□□□ -1.28
HMGXB4-202ENST00000418170 SOCS1O15524 211 aa7.09□□□□□ -1.28
HMGXB4-202ENST00000418170 DLEU1O43261 78 aa7.09□□□□□ -1.28
HMGXB4-202ENST00000418170 SLC16A7O60669 478 aa7.09□□□□□ -1.28
HMGXB4-202ENST00000418170 RAD51DO75771 328 aa7.09□□□□□ -1.28
HMGXB4-202ENST00000418170 DFFBO76075 338 aa7.09□□□□□ -1.28
HMGXB4-202ENST00000418170 MBPP02686 304 aaPredicted RBP7.09□□□□□ -1.28
HMGXB4-202ENST00000418170 CISD3P0C7P0 127 aa7.09□□□□□ -1.28
HMGXB4-202ENST00000418170 GABRR1P24046 479 aa7.09□□□□□ -1.28
HMGXB4-202ENST00000418170 PPM1AP35813 382 aa7.09□□□□□ -1.28
HMGXB4-202ENST00000418170 RGS19P49795 217 aa7.09□□□□□ -1.28
HMGXB4-202ENST00000418170 TDGF1P3P51864 188 aa7.09□□□□□ -1.28
HMGXB4-202ENST00000418170 CEBPGP53567 150 aa7.09□□□□□ -1.28
HMGXB4-202ENST00000418170 NUP54Q7Z3B4 507 aa7.09□□□□□ -1.28
HMGXB4-202ENST00000418170 CYB561D1Q8N8Q1 229 aa7.09□□□□□ -1.28
HMGXB4-202ENST00000418170 MRPL24Q96A35 216 aaKnown RBP7.09□□□□□ -1.28
HMGXB4-202ENST00000418170 VSX1Q9NZR4 365 aaPredicted RBP7.09□□□□□ -1.28
HMGXB4-202ENST00000418170 IGLON5A6NGN9 336 aa7.08□□□□□ -1.28
HMGXB4-202ENST00000418170 P2RY10O00398 339 aa7.08□□□□□ -1.28
HMGXB4-202ENST00000418170 TOX3O15405 576 aaPredicted RBP7.08□□□□□ -1.28
HMGXB4-202ENST00000418170 GNRH1P01148 92 aa7.08□□□□□ -1.28
HMGXB4-202ENST00000418170 HSPB1P04792 205 aaKnown RBP7.08□□□□□ -1.28
HMGXB4-202ENST00000418170 OR5AC1P0C628 307 aa7.08□□□□□ -1.28
HMGXB4-202ENST00000418170 PNLIPP16233 465 aa7.08□□□□□ -1.28
HMGXB4-202ENST00000418170 P2RY2P41231 377 aa7.08□□□□□ -1.28
HMGXB4-202ENST00000418170 TAS2R46P59540 309 aa7.08□□□□□ -1.28
HMGXB4-202ENST00000418170 H3F3AP84243 136 aa7.08□□□□□ -1.28
HMGXB4-202ENST00000418170 INSM1Q01101 510 aaPredicted RBP7.08□□□□□ -1.28
HMGXB4-202ENST00000418170 ACY1Q03154 408 aa7.08□□□□□ -1.28
HMGXB4-202ENST00000418170 GAGE1Q13065 139 aa7.08□□□□□ -1.28
HMGXB4-202ENST00000418170 RAB35Q15286 201 aa7.08□□□□□ -1.28
HMGXB4-202ENST00000418170 HNRNPA1L2Q32P51 320 aaKnown RBP7.08□□□□□ -1.28
HMGXB4-202ENST00000418170 RELTQ969Z4 430 aa7.08□□□□□ -1.28
HMGXB4-202ENST00000418170 KIR3DX1Q9H7L2 352 aa7.08□□□□□ -1.28
HMGXB4-202ENST00000418170 TMEM242Q9NWH2 141 aa7.08□□□□□ -1.28
HMGXB4-202ENST00000418170 EHFQ9NZC4 300 aa7.08□□□□□ -1.28
HMGXB4-202ENST00000418170 SLC35E2P0CK97 266 aa7.08□□□□□ -1.28
HMGXB4-202ENST00000418170 GIMD1P0DJR0 217 aa7.08□□□□□ -1.28
HMGXB4-202ENST00000418170 GNALP38405 381 aa7.08□□□□□ -1.28
HMGXB4-202ENST00000418170 TMEM50BP56557 158 aa7.08□□□□□ -1.28
HMGXB4-202ENST00000418170 RAB38P57729 211 aa7.08□□□□□ -1.28
HMGXB4-202ENST00000418170 HNRNPKP61978 463 aaKnown RBP eCLIP7.08□□□□□ -1.28
HMGXB4-202ENST00000418170 ICAM4Q14773 271 aa7.08□□□□□ -1.28
HMGXB4-202ENST00000418170 VITQ6UXI7 678 aa7.08□□□□□ -1.28
HMGXB4-202ENST00000418170 PRR18Q8N4B5 295 aa7.08□□□□□ -1.28
HMGXB4-202ENST00000418170 TAAR8Q969N4 342 aa7.08□□□□□ -1.28
HMGXB4-202ENST00000418170 TMEM208Q9BTX3 173 aa7.08□□□□□ -1.28
HMGXB4-202ENST00000418170 S1PR5Q9H228 398 aa7.08□□□□□ -1.28
HMGXB4-202ENST00000418170 CDH20Q9HBT6 801 aa7.08□□□□□ -1.28
HMGXB4-202ENST00000418170 DKKL1Q9UK85 242 aa7.08□□□□□ -1.28
HMGXB4-202ENST00000418170 LIPGQ9Y5X9 500 aa7.08□□□□□ -1.28
HMGXB4-202ENST00000418170 WSB1Q9Y6I7 421 aa7.08□□□□□ -1.28
HMGXB4-202ENST00000418170 TRBV24-1A0A075B6N3 115 aa7.08□□□□□ -1.28
HMGXB4-202ENST00000418170 LOC101059948A0A1B0GTJ6 334 aa7.08□□□□□ -1.28
HMGXB4-202ENST00000418170 EDDM13A0A1B0GTR0 161 aa7.08□□□□□ -1.28
HMGXB4-202ENST00000418170 ZNF705GA8MUZ8 300 aaPredicted RBP7.08□□□□□ -1.28
HMGXB4-202ENST00000418170 GEMIN2O14893 280 aaKnown RBP7.08□□□□□ -1.28
HMGXB4-202ENST00000418170 NSA2O95478 260 aaKnown RBP7.08□□□□□ -1.28
HMGXB4-202ENST00000418170 CTLA4P16410 223 aa7.08□□□□□ -1.28
HMGXB4-202ENST00000418170 MMP16P51512 607 aa7.08□□□□□ -1.28
HMGXB4-202ENST00000418170 DCAF10Q5QP82 559 aa7.08□□□□□ -1.28
HMGXB4-202ENST00000418170 SLC39A11Q8N1S5 342 aa7.08□□□□□ -1.28
HMGXB4-202ENST00000418170 ARHGEF39Q8N4T4 335 aa7.08□□□□□ -1.28
HMGXB4-202ENST00000418170 SPACA7Q96KW9 195 aa7.08□□□□□ -1.28
HMGXB4-202ENST00000418170 MBNL1Q9NR56 388 aaKnown RBP7.08□□□□□ -1.28
HMGXB4-202ENST00000418170 CYP8B1Q9UNU6 501 aa7.08□□□□□ -1.28
HMGXB4-202ENST00000418170 SCAF4O95104 1147 aaKnown RBP7.07□□□□□ -1.28
HMGXB4-202ENST00000418170 BGLAPP02818 100 aa7.07□□□□□ -1.28
HMGXB4-202ENST00000418170 METTL15P1P0C7V9 234 aa7.07□□□□□ -1.28
HMGXB4-202ENST00000418170 LINC00614P0C842 121 aa7.07□□□□□ -1.28
HMGXB4-202ENST00000418170 FOLR1P15328 257 aa7.07□□□□□ -1.28
HMGXB4-202ENST00000418170 NNATQ16517 81 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 143.4 ms