RNA–Protein interactions for RNA: ENST00000414174.1

SF3B1-203, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 593 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-203ENST00000414174 ATP6AP2A0A1C7CYW4 349 aa3.11□□□□□ -1.91
SF3B1-203ENST00000414174 TMEM189A5PLL7 270 aa3.11□□□□□ -1.91
SF3B1-203ENST00000414174 OR4C46A6NHA9 309 aa3.11□□□□□ -1.91
SF3B1-203ENST00000414174 FAM74A7A6NL05 159 aa3.11□□□□□ -1.91
SF3B1-203ENST00000414174 ZNF726A6NNF4 738 aa3.11□□□□□ -1.91
SF3B1-203ENST00000414174 CXorf49A8MYA2 514 aaPredicted RBP3.11□□□□□ -1.91
SF3B1-203ENST00000414174 K7ERI5 159 aa3.11□□□□□ -1.91
SF3B1-203ENST00000414174 AIPO00170 330 aa3.11□□□□□ -1.91
SF3B1-203ENST00000414174 PLPP1O14494 284 aa3.11□□□□□ -1.91
SF3B1-203ENST00000414174 UBFD1O14562 309 aaKnown RBP3.11□□□□□ -1.91
SF3B1-203ENST00000414174 VCYO14598 125 aa3.11□□□□□ -1.91
SF3B1-203ENST00000414174 HMGB3O15347 200 aaKnown RBP3.11□□□□□ -1.91
SF3B1-203ENST00000414174 C1orf105O95561 183 aa3.11□□□□□ -1.91
SF3B1-203ENST00000414174 GLUD1P00367 558 aa3.11□□□□□ -1.91
SF3B1-203ENST00000414174 OXTP01178 125 aa3.11□□□□□ -1.91
SF3B1-203ENST00000414174 HBZP02008 142 aa3.11□□□□□ -1.91
SF3B1-203ENST00000414174 AMBPP02760 352 aa3.11□□□□□ -1.91
SF3B1-203ENST00000414174 OPN1SWP03999 348 aa3.11□□□□□ -1.91
SF3B1-203ENST00000414174 APODP05090 189 aa3.11□□□□□ -1.91
SF3B1-203ENST00000414174 FABP3P05413 133 aa3.11□□□□□ -1.91
SF3B1-203ENST00000414174 DBIP07108 87 aaKnown RBP3.11□□□□□ -1.91
SF3B1-203ENST00000414174 UMODP07911 640 aa3.11□□□□□ -1.91
SF3B1-203ENST00000414174 ESDP10768 282 aa3.11□□□□□ -1.91
SF3B1-203ENST00000414174 HLA-EP13747 358 aa3.11□□□□□ -1.91
SF3B1-203ENST00000414174 GYPEP15421 78 aa3.11□□□□□ -1.91
SF3B1-203ENST00000414174 AZU1P20160 251 aa3.11□□□□□ -1.91
SF3B1-203ENST00000414174 MAOAP21397 527 aa3.11□□□□□ -1.91
SF3B1-203ENST00000414174 CD34P28906 385 aa3.11□□□□□ -1.91
SF3B1-203ENST00000414174 PPIFP30405 207 aaKnown RBP3.11□□□□□ -1.91
SF3B1-203ENST00000414174 GRPRP30550 384 aa3.11□□□□□ -1.91
SF3B1-203ENST00000414174 MAGEA5P43359 124 aa3.11□□□□□ -1.91
SF3B1-203ENST00000414174 TAS2R30P59541 319 aa3.11□□□□□ -1.91
SF3B1-203ENST00000414174 ERVFC1-1P60608 527 aa3.11□□□□□ -1.91
SF3B1-203ENST00000414174 PFN3P60673 137 aa3.11□□□□□ -1.91
SF3B1-203ENST00000414174 OSTNP61366 133 aa3.11□□□□□ -1.91
SF3B1-203ENST00000414174 SNRPD1P62314 119 aaKnown RBP3.11□□□□□ -1.91
SF3B1-203ENST00000414174 MRPS6P82932 125 aaKnown RBP3.11□□□□□ -1.91
SF3B1-203ENST00000414174 FMODQ06828 376 aa3.11□□□□□ -1.91
SF3B1-203ENST00000414174 OR5I1Q13606 314 aa3.11□□□□□ -1.91
SF3B1-203ENST00000414174 HTR4Q13639 388 aa3.11□□□□□ -1.91
SF3B1-203ENST00000414174 RUNX3Q13761 415 aa3.11□□□□□ -1.91
SF3B1-203ENST00000414174 LY6DQ14210 128 aa3.11□□□□□ -1.91
SF3B1-203ENST00000414174 ATXN7L3Q14CW9 347 aaPredicted RBP3.11□□□□□ -1.91
SF3B1-203ENST00000414174 GUSBP1Q15486 140 aa3.11□□□□□ -1.91
SF3B1-203ENST00000414174 ZNF181Q2M3W8 571 aa3.11□□□□□ -1.91
SF3B1-203ENST00000414174 HLA-DRB5Q30154 266 aa3.11□□□□□ -1.91
SF3B1-203ENST00000414174 SLC25A52Q3SY17 297 aa3.11□□□□□ -1.91
SF3B1-203ENST00000414174 FAM74A3Q4VXF1 159 aa3.11□□□□□ -1.91
SF3B1-203ENST00000414174 NHLRC3Q5JS37 347 aa3.11□□□□□ -1.91
SF3B1-203ENST00000414174 FFAR4Q5NUL3 377 aa3.11□□□□□ -1.91
SF3B1-203ENST00000414174 LDLRAD2Q5SZI1 272 aa3.11□□□□□ -1.91
SF3B1-203ENST00000414174 TEX36Q5VZQ5 186 aa3.11□□□□□ -1.91
SF3B1-203ENST00000414174 RTL6Q6ICC9 239 aa3.11□□□□□ -1.91
SF3B1-203ENST00000414174 ANKRD54Q6NXT1 300 aa3.11□□□□□ -1.91
SF3B1-203ENST00000414174 PRSS54Q6PEW0 395 aa3.11□□□□□ -1.91
SF3B1-203ENST00000414174 WDR59Q6PJI9 974 aa3.11□□□□□ -1.91
SF3B1-203ENST00000414174 SLC25A47Q6Q0C1 308 aa3.11□□□□□ -1.91
SF3B1-203ENST00000414174 TBPL2Q6SJ96 375 aa3.11□□□□□ -1.91
SF3B1-203ENST00000414174 STRADAQ7RTN6 431 aa3.11□□□□□ -1.91
SF3B1-203ENST00000414174 TSEN54Q7Z6J9 526 aaKnown RBP3.11□□□□□ -1.91
SF3B1-203ENST00000414174 MRGPREQ86SM8 312 aa3.11□□□□□ -1.91
SF3B1-203ENST00000414174 CALHM3Q86XJ0 350 aa3.11□□□□□ -1.91
SF3B1-203ENST00000414174 CMTM1Q8IZ96 169 aa3.11□□□□□ -1.91
SF3B1-203ENST00000414174 CMTM4Q8IZR5 234 aa3.11□□□□□ -1.91
SF3B1-203ENST00000414174 OSR2Q8N2R0 312 aa3.11□□□□□ -1.91
SF3B1-203ENST00000414174 MUC15Q8N387 334 aa3.11□□□□□ -1.91
SF3B1-203ENST00000414174 BPIFB2Q8N4F0 458 aa3.11□□□□□ -1.91
SF3B1-203ENST00000414174 TMEM99Q8N816 258 aa3.11□□□□□ -1.91
SF3B1-203ENST00000414174 ZNF548Q8NEK5 533 aaPredicted RBP3.11□□□□□ -1.91
SF3B1-203ENST00000414174 OR1J2Q8NGS2 313 aa3.11□□□□□ -1.91
SF3B1-203ENST00000414174 OR5K2Q8NHB8 316 aa3.11□□□□□ -1.91
SF3B1-203ENST00000414174 ARRDC2Q8TBH0 407 aa3.11□□□□□ -1.91
SF3B1-203ENST00000414174 UBE2E3Q969T4 207 aa3.11□□□□□ -1.91
SF3B1-203ENST00000414174 PTX4Q96A99 478 aa3.11□□□□□ -1.91
SF3B1-203ENST00000414174 FBXL8Q96CD0 374 aa3.11□□□□□ -1.91
SF3B1-203ENST00000414174 GABRG3Q99928 467 aa3.11□□□□□ -1.91
SF3B1-203ENST00000414174 ZNF649Q9BS31 505 aa3.11□□□□□ -1.91
SF3B1-203ENST00000414174 DOHHQ9BU89 302 aa3.11□□□□□ -1.91
SF3B1-203ENST00000414174 MLST8Q9BVC4 326 aa3.11□□□□□ -1.91
SF3B1-203ENST00000414174 EBPLQ9BY08 206 aa3.11□□□□□ -1.91
SF3B1-203ENST00000414174 CHIAQ9BZP6 476 aa3.11□□□□□ -1.91
SF3B1-203ENST00000414174 NKX6-2Q9C056 277 aaPredicted RBP3.11□□□□□ -1.91
SF3B1-203ENST00000414174 AAMDCQ9H7C9 122 aa3.11□□□□□ -1.91
SF3B1-203ENST00000414174 METTL17Q9H7H0 456 aaPredicted RBP3.11□□□□□ -1.91
SF3B1-203ENST00000414174 Q9H8V8 135 aa3.11□□□□□ -1.91
SF3B1-203ENST00000414174 TXNRD2Q9NNW7 524 aa3.11□□□□□ -1.91
SF3B1-203ENST00000414174 FGF20Q9NP95 211 aaPredicted RBP3.11□□□□□ -1.91
SF3B1-203ENST00000414174 A4GALTQ9NPC4 353 aa3.11□□□□□ -1.91
SF3B1-203ENST00000414174 ACP6Q9NPH0 428 aa3.11□□□□□ -1.91
SF3B1-203ENST00000414174 AKIP1Q9NQ31 210 aa3.11□□□□□ -1.91
SF3B1-203ENST00000414174 GDF3Q9NR23 364 aa3.11□□□□□ -1.91
SF3B1-203ENST00000414174 MRPL16Q9NX20 251 aaKnown RBP3.11□□□□□ -1.91
SF3B1-203ENST00000414174 FAM206AQ9NX38 181 aa3.11□□□□□ -1.91
SF3B1-203ENST00000414174 FAM30AQ9NZY2 134 aa3.11□□□□□ -1.91
SF3B1-203ENST00000414174 FBXL2Q9UKC9 423 aa3.11□□□□□ -1.91
SF3B1-203ENST00000414174 CES1P1Q9UKY3 287 aa3.11□□□□□ -1.91
SF3B1-203ENST00000414174 TRAPPC2LQ9UL33 140 aa3.11□□□□□ -1.91
SF3B1-203ENST00000414174 ST3GAL6Q9Y274 331 aa3.11□□□□□ -1.91
SF3B1-203ENST00000414174 LSM5Q9Y4Y9 91 aaKnown RBP3.11□□□□□ -1.91
SF3B1-203ENST00000414174 SNX10Q9Y5X0 201 aa3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms