RNA–Protein interactions for RNA: ENST00000413186.6

SYNE1-211, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 4,860 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-211ENST00000413186 HPNP05981 417 aa7.55□□□□□ -1.2
SYNE1-211ENST00000413186 OR8U9P0C7N5 309 aa7.55□□□□□ -1.2
SYNE1-211ENST00000413186 P2RY6Q15077 328 aa7.55□□□□□ -1.2
SYNE1-211ENST00000413186 SMUG1Q53HV7 270 aa7.55□□□□□ -1.2
SYNE1-211ENST00000413186 ANKRD16Q6P6B7 361 aa7.55□□□□□ -1.2
SYNE1-211ENST00000413186 ABHD17AQ96GS6 310 aa7.55□□□□□ -1.2
SYNE1-211ENST00000413186 TMPRSS5Q9H3S3 457 aa7.55□□□□□ -1.2
SYNE1-211ENST00000413186 LIN7BQ9HAP6 207 aa7.55□□□□□ -1.2
SYNE1-211ENST00000413186 STEAP1Q9UHE8 339 aa7.55□□□□□ -1.2
SYNE1-211ENST00000413186 POLDIP2Q9Y2S7 368 aa7.55□□□□□ -1.2
SYNE1-211ENST00000413186 KCNMB2Q9Y691 235 aa7.55□□□□□ -1.2
SYNE1-211ENST00000413186 B4DXG7 233 aa7.55□□□□□ -1.2
SYNE1-211ENST00000413186 SC5DO75845 299 aa7.55□□□□□ -1.2
SYNE1-211ENST00000413186 DBHP09172 617 aa7.55□□□□□ -1.2
SYNE1-211ENST00000413186 ZNF44P15621 663 aa7.55□□□□□ -1.2
SYNE1-211ENST00000413186 TMEM11P17152 192 aa7.55□□□□□ -1.2
SYNE1-211ENST00000413186 SELENOPP49908 381 aa7.55□□□□□ -1.2
SYNE1-211ENST00000413186 SNU13P55769 128 aaKnown RBP7.55□□□□□ -1.2
SYNE1-211ENST00000413186 DLX5P56178 289 aa7.55□□□□□ -1.2
SYNE1-211ENST00000413186 MAJINQ3KP22 176 aa7.55□□□□□ -1.2
SYNE1-211ENST00000413186 PAN3Q58A45 887 aaKnown RBP7.55□□□□□ -1.2
SYNE1-211ENST00000413186 RGS7BPQ6MZT1 257 aaPredicted RBP7.55□□□□□ -1.2
SYNE1-211ENST00000413186 FADS6Q8N9I5 356 aa7.55□□□□□ -1.2
SYNE1-211ENST00000413186 OR56B1Q8NGI3 324 aa7.55□□□□□ -1.2
SYNE1-211ENST00000413186 OR6K3Q8NGY3 331 aa7.55□□□□□ -1.2
SYNE1-211ENST00000413186 APH1BQ8WW43 257 aa7.55□□□□□ -1.2
SYNE1-211ENST00000413186 RAB39BQ96DA2 213 aa7.55□□□□□ -1.2
SYNE1-211ENST00000413186 ZCCHC4Q9H5U6 513 aa7.55□□□□□ -1.2
SYNE1-211ENST00000413186 GPR35Q9HC97 309 aa7.55□□□□□ -1.2
SYNE1-211ENST00000413186 MRPS28Q9Y2Q9 187 aaKnown RBP7.55□□□□□ -1.2
SYNE1-211ENST00000413186 A0A1W2PNV4 684 aa7.55□□□□□ -1.2
SYNE1-211ENST00000413186 ZNF736B4DX44 427 aaPredicted RBP7.55□□□□□ -1.2
SYNE1-211ENST00000413186 BET1O15155 118 aa7.55□□□□□ -1.2
SYNE1-211ENST00000413186 GLSO94925 669 aaPredicted RBP7.55□□□□□ -1.2
SYNE1-211ENST00000413186 KIR2DL3P43628 341 aa7.55□□□□□ -1.2
SYNE1-211ENST00000413186 RFX2P48378 723 aa7.55□□□□□ -1.2
SYNE1-211ENST00000413186 PCP4P48539 62 aa7.55□□□□□ -1.2
SYNE1-211ENST00000413186 RBP2P50120 134 aa7.55□□□□□ -1.2
SYNE1-211ENST00000413186 CCR9P51686 369 aa7.55□□□□□ -1.2
SYNE1-211ENST00000413186 SCAND1P57086 179 aa7.55□□□□□ -1.2
SYNE1-211ENST00000413186 ZNF121P58317 390 aaPredicted RBP7.55□□□□□ -1.2
SYNE1-211ENST00000413186 P2RY14Q15391 338 aa7.55□□□□□ -1.2
SYNE1-211ENST00000413186 OR8G1Q15617 311 aa7.55□□□□□ -1.2
SYNE1-211ENST00000413186 SLC16A12Q6ZSM3 486 aa7.55□□□□□ -1.2
SYNE1-211ENST00000413186 TRILQ7L0X0 811 aa7.55□□□□□ -1.2
SYNE1-211ENST00000413186 CCDC190Q86UF4 302 aa7.55□□□□□ -1.2
SYNE1-211ENST00000413186 ZFP62Q8NB50 900 aaPredicted RBP7.55□□□□□ -1.2
SYNE1-211ENST00000413186 RNF128Q8TEB7 428 aa7.55□□□□□ -1.2
SYNE1-211ENST00000413186 PP6455Q8WZ26 134 aa7.55□□□□□ -1.2
SYNE1-211ENST00000413186 SGK494Q96LW2 274 aa7.55□□□□□ -1.2
SYNE1-211ENST00000413186 TMEM59Q9BXS4 323 aa7.55□□□□□ -1.2
SYNE1-211ENST00000413186 SLC5A7Q9GZV3 580 aa7.55□□□□□ -1.2
SYNE1-211ENST00000413186 LRP12Q9Y561 859 aa7.55□□□□□ -1.2
SYNE1-211ENST00000413186 ANKRD34BA5PLL1 514 aa7.54□□□□□ -1.2
SYNE1-211ENST00000413186 CCL21O00585 134 aa7.54□□□□□ -1.2
SYNE1-211ENST00000413186 AMY2AP04746 511 aa7.54□□□□□ -1.2
SYNE1-211ENST00000413186 STAG3L2P0CL84 134 aa7.54□□□□□ -1.2
SYNE1-211ENST00000413186 EVX1P49640 407 aa7.54□□□□□ -1.2
SYNE1-211ENST00000413186 SLC25A53Q5H9E4 307 aa7.54□□□□□ -1.2
SYNE1-211ENST00000413186 PABPC1L2AQ5JQF8 200 aa7.54□□□□□ -1.2
SYNE1-211ENST00000413186 SYT9Q86SS6 491 aa7.54□□□□□ -1.2
SYNE1-211ENST00000413186 ZNF561Q8N587 486 aa7.54□□□□□ -1.2
SYNE1-211ENST00000413186 OR10R2Q8NGX6 335 aa7.54□□□□□ -1.2
SYNE1-211ENST00000413186 GLYATL2Q8WU03 294 aa7.54□□□□□ -1.2
SYNE1-211ENST00000413186 REEP6Q96HR9 211 aa7.54□□□□□ -1.2
SYNE1-211ENST00000413186 ADGRL4Q9HBW9 690 aa7.54□□□□□ -1.2
SYNE1-211ENST00000413186 FAM90A27PA6NNH2 459 aa7.54□□□□□ -1.2
SYNE1-211ENST00000413186 ZNF724A8MTY0 619 aa7.54□□□□□ -1.2
SYNE1-211ENST00000413186 TMEM229AB2RXF0 380 aa7.54□□□□□ -1.2
SYNE1-211ENST00000413186 AQP7O14520 342 aa7.54□□□□□ -1.2
SYNE1-211ENST00000413186 CRYZL1O95825 349 aa7.54□□□□□ -1.2
SYNE1-211ENST00000413186 HOXB1P14653 301 aaPredicted RBP7.54□□□□□ -1.2
SYNE1-211ENST00000413186 ALOX5APP20292 161 aa7.54□□□□□ -1.2
SYNE1-211ENST00000413186 PSMB1P20618 241 aaKnown RBP7.54□□□□□ -1.2
SYNE1-211ENST00000413186 CPT2P23786 658 aa7.54□□□□□ -1.2
SYNE1-211ENST00000413186 HLA-DMAP28067 261 aa7.54□□□□□ -1.2
SYNE1-211ENST00000413186 IRF3Q14653 427 aa7.54□□□□□ -1.2
SYNE1-211ENST00000413186 GNMTQ14749 295 aa7.54□□□□□ -1.2
SYNE1-211ENST00000413186 COL5A1-AS1Q5SY13 56 aa7.54□□□□□ -1.2
SYNE1-211ENST00000413186 RIPPLY2Q5TAB7 128 aa7.54□□□□□ -1.2
SYNE1-211ENST00000413186 BHLHA15Q7RTS1 189 aaPredicted RBP7.54□□□□□ -1.2
SYNE1-211ENST00000413186 SVBPQ8N300 66 aa7.54□□□□□ -1.2
SYNE1-211ENST00000413186 SYT3Q9BQG1 590 aa7.54□□□□□ -1.2
SYNE1-211ENST00000413186 HINT2Q9BX68 163 aa7.54□□□□□ -1.2
SYNE1-211ENST00000413186 TP53TG5Q9Y2B4 290 aa7.54□□□□□ -1.2
SYNE1-211ENST00000413186 FLVCR1Q9Y5Y0 555 aa7.54□□□□□ -1.2
SYNE1-211ENST00000413186 ANKRD61A6NGH8 418 aa7.54□□□□□ -1.2
SYNE1-211ENST00000413186 LYZL6O75951 148 aa7.54□□□□□ -1.2
SYNE1-211ENST00000413186 ZIC2O95409 532 aaPredicted RBP7.54□□□□□ -1.2
SYNE1-211ENST00000413186 DOC2BQ14184 412 aa7.54□□□□□ -1.2
SYNE1-211ENST00000413186 RBMS2Q15434 407 aaKnown RBP7.54□□□□□ -1.2
SYNE1-211ENST00000413186 TTC32Q5I0X7 151 aa7.54□□□□□ -1.2
SYNE1-211ENST00000413186 INO80CQ6PI98 192 aaPredicted RBP7.54□□□□□ -1.2
SYNE1-211ENST00000413186 SCGB1D4Q6XE38 83 aa7.54□□□□□ -1.2
SYNE1-211ENST00000413186 KLHDC1Q8N7A1 406 aa7.54□□□□□ -1.2
SYNE1-211ENST00000413186 SLC30A7Q8NEW0 376 aa7.54□□□□□ -1.2
SYNE1-211ENST00000413186 OR1M1Q8NGA1 313 aa7.54□□□□□ -1.2
SYNE1-211ENST00000413186 ZNRF4Q8WWF5 429 aa7.54□□□□□ -1.2
SYNE1-211ENST00000413186 HSD17B8Q92506 261 aa7.54□□□□□ -1.2
SYNE1-211ENST00000413186 DAZAP1Q96EP5 407 aaKnown RBP7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms