RNA–Protein interactions for RNA: ENST00000410080.5

PRPF40A-202, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PRPF40A, Length 8,048 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-202ENST00000410080 IGKV3D-15A0A087WSY6 115 aa10.12□□□□□ -0.79
PRPF40A-202ENST00000410080 IGKV3-15P01624 115 aa10.12□□□□□ -0.79
PRPF40A-202ENST00000410080 TOR2AQ5JU69 321 aa10.12□□□□□ -0.79
PRPF40A-202ENST00000410080 TMEM81Q6P7N7 255 aa10.12□□□□□ -0.79
PRPF40A-202ENST00000410080 BHLHA15Q7RTS1 189 aaPredicted RBP10.12□□□□□ -0.79
PRPF40A-202ENST00000410080 RNF2Q99496 336 aa10.12□□□□□ -0.79
PRPF40A-202ENST00000410080 PCGF1Q9BSM1 259 aa10.12□□□□□ -0.79
PRPF40A-202ENST00000410080 LAMP3Q9UQV4 416 aa10.12□□□□□ -0.79
PRPF40A-202ENST00000410080 IGHV3-43A0A0B4J1X8 118 aa10.12□□□□□ -0.79
PRPF40A-202ENST00000410080 SERPINE3A8MV23 424 aa10.12□□□□□ -0.79
PRPF40A-202ENST00000410080 TARM1B6A8C7 271 aa10.12□□□□□ -0.79
PRPF40A-202ENST00000410080 ABLIM3O94929 683 aa10.12□□□□□ -0.79
PRPF40A-202ENST00000410080 IGHV3-43DP0DP04 118 aa10.12□□□□□ -0.79
PRPF40A-202ENST00000410080 PNLIPRP2P54317 469 aa10.12□□□□□ -0.79
PRPF40A-202ENST00000410080 RPL18Q07020 188 aaKnown RBP10.12□□□□□ -0.79
PRPF40A-202ENST00000410080 ZNF239Q16600 458 aaKnown RBP10.12□□□□□ -0.79
PRPF40A-202ENST00000410080 ETFRF1Q6IPR1 90 aa10.12□□□□□ -0.79
PRPF40A-202ENST00000410080 ADAM5Q6NVV9 412 aa10.12□□□□□ -0.79
PRPF40A-202ENST00000410080 NUDT8Q8WV74 236 aa10.12□□□□□ -0.79
PRPF40A-202ENST00000410080 NRG4Q8WWG1 115 aa10.12□□□□□ -0.79
PRPF40A-202ENST00000410080 ADGRG7Q96K78 797 aa10.12□□□□□ -0.79
PRPF40A-202ENST00000410080 ABHD14AQ9BUJ0 271 aa10.12□□□□□ -0.79
PRPF40A-202ENST00000410080 THYN1Q9P016 225 aa10.12□□□□□ -0.79
PRPF40A-202ENST00000410080 MRPS14O60783 128 aaKnown RBP10.12□□□□□ -0.79
PRPF40A-202ENST00000410080 VAMP5O95183 116 aa10.12□□□□□ -0.79
PRPF40A-202ENST00000410080 GCAP28676 217 aa10.12□□□□□ -0.79
PRPF40A-202ENST00000410080 RFX2P48378 723 aa10.12□□□□□ -0.79
PRPF40A-202ENST00000410080 GUCA2BQ16661 112 aa10.12□□□□□ -0.79
PRPF40A-202ENST00000410080 CEACAM16Q2WEN9 425 aa10.12□□□□□ -0.79
PRPF40A-202ENST00000410080 FFAR4Q5NUL3 377 aa10.12□□□□□ -0.79
PRPF40A-202ENST00000410080 ELFN2Q5R3F8 820 aa10.12□□□□□ -0.79
PRPF40A-202ENST00000410080 C16orf52Q8NHV5 167 aa10.12□□□□□ -0.79
PRPF40A-202ENST00000410080 ZDHHC19Q8WVZ1 309 aaPredicted RBP10.12□□□□□ -0.79
PRPF40A-202ENST00000410080 GDF2Q9UK05 429 aaPredicted RBP10.12□□□□□ -0.79
PRPF40A-202ENST00000410080 WASHC3Q9Y3C0 194 aa10.12□□□□□ -0.79
PRPF40A-202ENST00000410080 POLEQ07864 2286 aa10.12□□□□□ -0.79
PRPF40A-202ENST00000410080 FCGR3BO75015 233 aa10.12□□□□□ -0.79
PRPF40A-202ENST00000410080 ORM1P02763 201 aa10.12□□□□□ -0.79
PRPF40A-202ENST00000410080 ZDHHC11BP0C7U3 371 aa10.12□□□□□ -0.79
PRPF40A-202ENST00000410080 PF4V1P10720 104 aa10.12□□□□□ -0.79
PRPF40A-202ENST00000410080 ECSCRQ19T08 205 aa10.12□□□□□ -0.79
PRPF40A-202ENST00000410080 CALHM3Q86XJ0 350 aa10.12□□□□□ -0.79
PRPF40A-202ENST00000410080 CIB3Q96Q77 187 aaPredicted RBP10.12□□□□□ -0.79
PRPF40A-202ENST00000410080 MRPL37Q9BZE1 423 aaKnown RBP10.12□□□□□ -0.79
PRPF40A-202ENST00000410080 A4GNTQ9UNA3 340 aa10.12□□□□□ -0.79
PRPF40A-202ENST00000410080 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.12□□□□□ -0.79
PRPF40A-202ENST00000410080 CIDEAO60543 219 aa10.12□□□□□ -0.79
PRPF40A-202ENST00000410080 RPL30P62888 115 aaKnown RBP10.12□□□□□ -0.79
PRPF40A-202ENST00000410080 RAB1CQ92928 201 aa10.12□□□□□ -0.79
PRPF40A-202ENST00000410080 OR1A1Q9P1Q5 309 aa10.12□□□□□ -0.79
PRPF40A-202ENST00000410080 LIPGQ9Y5X9 500 aa10.12□□□□□ -0.79
PRPF40A-202ENST00000410080 TNXAQ16473 311 aa10.11□□□□□ -0.79
PRPF40A-202ENST00000410080 WDR88Q6ZMY6 472 aa10.11□□□□□ -0.79
PRPF40A-202ENST00000410080 TIMP4Q99727 224 aa10.11□□□□□ -0.79
PRPF40A-202ENST00000410080 ARHGDIGQ99819 225 aa10.11□□□□□ -0.79
PRPF40A-202ENST00000410080 ANKRD60Q9BZ19 345 aa10.11□□□□□ -0.79
PRPF40A-202ENST00000410080 CHST2Q9Y4C5 530 aa10.11□□□□□ -0.79
PRPF40A-202ENST00000410080 OR4A8P0C604 315 aa10.11□□□□□ -0.79
PRPF40A-202ENST00000410080 RD3LP0DJH9 198 aa10.11□□□□□ -0.79
PRPF40A-202ENST00000410080 CEACAM3P40198 252 aa10.11□□□□□ -0.79
PRPF40A-202ENST00000410080 SHBQ15464 509 aa10.11□□□□□ -0.79
PRPF40A-202ENST00000410080 EMC4Q5J8M3 183 aa10.11□□□□□ -0.79
PRPF40A-202ENST00000410080 C19orf48Q6RUI8 117 aa10.11□□□□□ -0.79
PRPF40A-202ENST00000410080 BAHD1Q8TBE0 780 aaPredicted RBP10.11□□□□□ -0.79
PRPF40A-202ENST00000410080 S1PR5Q9H228 398 aa10.11□□□□□ -0.79
PRPF40A-202ENST00000410080 ZNF586Q9NXT0 402 aa10.11□□□□□ -0.79
PRPF40A-202ENST00000410080 SEMA7AO75326 666 aa10.11□□□□□ -0.79
PRPF40A-202ENST00000410080 FAHP16930 419 aa10.11□□□□□ -0.79
PRPF40A-202ENST00000410080 PSMB1P20618 241 aaKnown RBP10.11□□□□□ -0.79
PRPF40A-202ENST00000410080 BRS3P32247 399 aa10.11□□□□□ -0.79
PRPF40A-202ENST00000410080 SPCS2Q15005 226 aa10.11□□□□□ -0.79
PRPF40A-202ENST00000410080 C9orf50Q5SZB4 431 aa10.11□□□□□ -0.79
PRPF40A-202ENST00000410080 UBE3DQ7Z6J8 389 aa10.11□□□□□ -0.79
PRPF40A-202ENST00000410080 NIPSNAP1Q9BPW8 284 aa10.11□□□□□ -0.79
PRPF40A-202ENST00000410080 PRDM14Q9GZV8 571 aa10.11□□□□□ -0.79
PRPF40A-202ENST00000410080 RHOFQ9HBH0 211 aa10.11□□□□□ -0.79
PRPF40A-202ENST00000410080 FKBP11Q9NYL4 201 aa10.11□□□□□ -0.79
PRPF40A-202ENST00000410080 TMEM200CA6NKL6 621 aa10.11□□□□□ -0.79
PRPF40A-202ENST00000410080 GGTLC2Q14390 218 aa10.11□□□□□ -0.79
PRPF40A-202ENST00000410080 FNDC7Q5VTL7 733 aa10.11□□□□□ -0.79
PRPF40A-202ENST00000410080 B3GNTL1Q67FW5 361 aaPredicted RBP10.11□□□□□ -0.79
PRPF40A-202ENST00000410080 RNASEKQ6P5S7 137 aaKnown RBP10.11□□□□□ -0.79
PRPF40A-202ENST00000410080 APOBEC4Q8WW27 367 aaKnown RBP10.11□□□□□ -0.79
PRPF40A-202ENST00000410080 LAT2Q9GZY6 243 aa10.11□□□□□ -0.79
PRPF40A-202ENST00000410080 ST8SIA3O43173 380 aa10.11□□□□□ -0.79
PRPF40A-202ENST00000410080 NPPBP16860 134 aa10.11□□□□□ -0.79
PRPF40A-202ENST00000410080 G6PCP35575 357 aa10.11□□□□□ -0.79
PRPF40A-202ENST00000410080 CCR5P51681 352 aa10.11□□□□□ -0.79
PRPF40A-202ENST00000410080 PPP1CBP62140 327 aa10.11□□□□□ -0.79
PRPF40A-202ENST00000410080 ZNF683Q8IZ20 524 aa10.11□□□□□ -0.79
PRPF40A-202ENST00000410080 PKMYT1Q99640 499 aa10.11□□□□□ -0.79
PRPF40A-202ENST00000410080 MKRN2Q9H000 416 aaKnown RBP10.11□□□□□ -0.79
PRPF40A-202ENST00000410080 B4GALT3O60512 393 aa10.11□□□□□ -0.79
PRPF40A-202ENST00000410080 PCK2Q16822 640 aa10.11□□□□□ -0.79
PRPF40A-202ENST00000410080 Q6ZS52 159 aa10.11□□□□□ -0.79
PRPF40A-202ENST00000410080 C2CD4CQ8TF44 421 aa10.11□□□□□ -0.79
PRPF40A-202ENST00000410080 SDF2Q99470 211 aa10.11□□□□□ -0.79
PRPF40A-202ENST00000410080 C20orf27Q9GZN8 174 aa10.11□□□□□ -0.79
PRPF40A-202ENST00000410080 TMEM231Q9H6L2 316 aa10.11□□□□□ -0.79
PRPF40A-202ENST00000410080 LTB4R2Q9NPC1 389 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms