RNA–Protein interactions for RNA: ENST00000409937.1

CNGA3-204, Transcript of cyclic nucleotide gated channel alpha 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CNGA3, Length 2,615 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA3-204ENST00000409937 MED6O75586 246 aa12.35□□□□□ -0.43
CNGA3-204ENST00000409937 PTGFRP43088 359 aa12.35□□□□□ -0.43
CNGA3-204ENST00000409937 SPEM2Q0P670 501 aa12.35□□□□□ -0.43
CNGA3-204ENST00000409937 PDCD1Q15116 288 aa12.35□□□□□ -0.43
CNGA3-204ENST00000409937 SP6Q3SY56 376 aa12.35□□□□□ -0.43
CNGA3-204ENST00000409937 POC1AQ8NBT0 407 aa12.35□□□□□ -0.43
CNGA3-204ENST00000409937 OR6S1Q8NH40 331 aa12.35□□□□□ -0.43
CNGA3-204ENST00000409937 JSRP1Q96MG2 331 aaPredicted RBP12.35□□□□□ -0.43
CNGA3-204ENST00000409937 RASL10BQ96S79 203 aa12.35□□□□□ -0.43
CNGA3-204ENST00000409937 SLC5A7Q9GZV3 580 aa12.35□□□□□ -0.43
CNGA3-204ENST00000409937 ZNF160Q9HCG1 818 aa12.35□□□□□ -0.43
CNGA3-204ENST00000409937 GPR173Q9NS66 373 aa12.35□□□□□ -0.43
CNGA3-204ENST00000409937 UQCC1Q9NVA1 299 aa12.35□□□□□ -0.43
CNGA3-204ENST00000409937 NPIPB13A6NJU9 1138 aa12.35□□□□□ -0.43
CNGA3-204ENST00000409937 NPIPB4C9JG80 1138 aa12.35□□□□□ -0.43
CNGA3-204ENST00000409937 SPRY1O43609 319 aaPredicted RBP12.35□□□□□ -0.43
CNGA3-204ENST00000409937 TBPP20226 339 aa12.35□□□□□ -0.43
CNGA3-204ENST00000409937 OPRM1P35372 400 aa12.35□□□□□ -0.43
CNGA3-204ENST00000409937 SUMO3P55854 103 aaPredicted RBP12.35□□□□□ -0.43
CNGA3-204ENST00000409937 CHRFAM7AQ494W8 412 aa12.35□□□□□ -0.43
CNGA3-204ENST00000409937 TSPO2Q5TGU0 170 aa12.35□□□□□ -0.43
CNGA3-204ENST00000409937 UQCC3Q6UW78 93 aa12.35□□□□□ -0.43
CNGA3-204ENST00000409937 CPEB2Q7Z5Q1 589 aaKnown RBP12.35□□□□□ -0.43
CNGA3-204ENST00000409937 LHFPL1Q86WI0 220 aa12.35□□□□□ -0.43
CNGA3-204ENST00000409937 ARRDC1Q8N5I2 433 aa12.35□□□□□ -0.43
CNGA3-204ENST00000409937 CMSS1Q9BQ75 279 aaKnown RBP12.35□□□□□ -0.43
CNGA3-204ENST00000409937 RHOFQ9HBH0 211 aa12.35□□□□□ -0.43
CNGA3-204ENST00000409937 RAB18Q9NP72 206 aa12.35□□□□□ -0.43
CNGA3-204ENST00000409937 FBLN5Q9UBX5 448 aa12.35□□□□□ -0.43
CNGA3-204ENST00000409937 ANAPC10Q9UM13 185 aa12.35□□□□□ -0.43
CNGA3-204ENST00000409937 PIGLQ9Y2B2 252 aa12.35□□□□□ -0.43
CNGA3-204ENST00000409937 LSM5Q9Y4Y9 91 aaKnown RBP12.35□□□□□ -0.43
CNGA3-204ENST00000409937 CACNA1EQ15878 2313 aa12.35□□□□□ -0.43
CNGA3-204ENST00000409937 CSTBP04080 98 aaKnown RBP12.34□□□□□ -0.43
CNGA3-204ENST00000409937 SNAI3Q3KNW1 292 aa12.34□□□□□ -0.43
CNGA3-204ENST00000409937 CCDC157Q569K6 752 aa12.34□□□□□ -0.43
CNGA3-204ENST00000409937 DOK3Q7L591 496 aa12.34□□□□□ -0.43
CNGA3-204ENST00000409937 PEG10Q86TG7 708 aaKnown RBP12.34□□□□□ -0.43
CNGA3-204ENST00000409937 TOMM40LQ969M1 308 aa12.34□□□□□ -0.43
CNGA3-204ENST00000409937 GNRHR2Q96P88 292 aa12.34□□□□□ -0.43
CNGA3-204ENST00000409937 OCSTAMPQ9BR26 566 aa12.34□□□□□ -0.43
CNGA3-204ENST00000409937 ZNF2Q9BSG1 426 aaPredicted RBP12.34□□□□□ -0.43
CNGA3-204ENST00000409937 URM1Q9BTM9 101 aaKnown RBP12.34□□□□□ -0.43
CNGA3-204ENST00000409937 RBM24Q9BX46 236 aaKnown RBP12.34□□□□□ -0.43
CNGA3-204ENST00000409937 LIME1Q9H400 295 aa12.34□□□□□ -0.43
CNGA3-204ENST00000409937 LPAR3Q9UBY5 353 aa12.34□□□□□ -0.43
CNGA3-204ENST00000409937 ARPC4-TTLL3A0A0A6YYG9 625 aa12.34□□□□□ -0.43
CNGA3-204ENST00000409937 PATE4P0C8F1 98 aa12.34□□□□□ -0.43
CNGA3-204ENST00000409937 SRFP11831 508 aa12.34□□□□□ -0.43
CNGA3-204ENST00000409937 FLI1Q01543 452 aaPredicted RBP12.34□□□□□ -0.43
CNGA3-204ENST00000409937 IAH1Q2TAA2 248 aaPredicted RBP12.34□□□□□ -0.43
CNGA3-204ENST00000409937 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.34□□□□□ -0.43
CNGA3-204ENST00000409937 MRPL24Q96A35 216 aaKnown RBP12.34□□□□□ -0.43
CNGA3-204ENST00000409937 ESRP2Q9H6T0 727 aaKnown RBP12.34□□□□□ -0.43
CNGA3-204ENST00000409937 MOB1AQ9H8S9 216 aa12.34□□□□□ -0.43
CNGA3-204ENST00000409937 MTCH2Q9Y6C9 303 aa12.34□□□□□ -0.43
CNGA3-204ENST00000409937 SCGNO76038 276 aa12.33□□□□□ -0.44
CNGA3-204ENST00000409937 ZNF708P17019 499 aa12.33□□□□□ -0.44
CNGA3-204ENST00000409937 KCNJ3P48549 501 aa12.33□□□□□ -0.44
CNGA3-204ENST00000409937 GSK3AP49840 483 aa12.33□□□□□ -0.44
CNGA3-204ENST00000409937 NOVA1P51513 510 aaKnown RBP12.33□□□□□ -0.44
CNGA3-204ENST00000409937 TGIF1Q15583 401 aa12.33□□□□□ -0.44
CNGA3-204ENST00000409937 RSPO1Q2MKA7 263 aaPredicted RBP12.33□□□□□ -0.44
CNGA3-204ENST00000409937 SEMA6DQ8NFY4 1073 aa12.33□□□□□ -0.44
CNGA3-204ENST00000409937 OR6X1Q8NH79 312 aa12.33□□□□□ -0.44
CNGA3-204ENST00000409937 SSC4DQ8WTU2 575 aa12.33□□□□□ -0.44
CNGA3-204ENST00000409937 C2orf50Q96LR7 162 aa12.33□□□□□ -0.44
CNGA3-204ENST00000409937 OXGR1Q96P68 337 aa12.33□□□□□ -0.44
CNGA3-204ENST00000409937 SPSB2Q99619 263 aa12.33□□□□□ -0.44
CNGA3-204ENST00000409937 NRIP2Q9BQI9 281 aa12.33□□□□□ -0.44
CNGA3-204ENST00000409937 TAF9BQ9HBM6 251 aa12.33□□□□□ -0.44
CNGA3-204ENST00000409937 MMP26Q9NRE1 261 aa12.33□□□□□ -0.44
CNGA3-204ENST00000409937 A0A1B0GV50 99 aa12.33□□□□□ -0.44
CNGA3-204ENST00000409937 A0A1W2PQM1 296 aa12.33□□□□□ -0.44
CNGA3-204ENST00000409937 BCAT2O15382 392 aaPredicted RBP12.33□□□□□ -0.44
CNGA3-204ENST00000409937 HKR1P10072 659 aa12.33□□□□□ -0.44
CNGA3-204ENST00000409937 CD80P33681 288 aa12.33□□□□□ -0.44
CNGA3-204ENST00000409937 CYCSP99999 105 aaKnown RBP12.33□□□□□ -0.44
CNGA3-204ENST00000409937 PJVKQ0ZLH3 352 aa12.33□□□□□ -0.44
CNGA3-204ENST00000409937 SHBQ15464 509 aa12.33□□□□□ -0.44
CNGA3-204ENST00000409937 Q7L0L9 218 aa12.33□□□□□ -0.44
CNGA3-204ENST00000409937 TGIF2Q9GZN2 237 aa12.33□□□□□ -0.44
CNGA3-204ENST00000409937 SHANK1Q9Y566 2161 aa12.33□□□□□ -0.44
CNGA3-204ENST00000409937 ZFAND5O76080 213 aa12.32□□□□□ -0.44
CNGA3-204ENST00000409937 SFTA3P0C7M3 94 aa12.32□□□□□ -0.44
CNGA3-204ENST00000409937 SPP1P10451 314 aa12.32□□□□□ -0.44
CNGA3-204ENST00000409937 CTAG1AP78358 180 aa12.32□□□□□ -0.44
CNGA3-204ENST00000409937 CCL7P80098 99 aa12.32□□□□□ -0.44
CNGA3-204ENST00000409937 ENDOGQ14249 297 aaKnown RBP12.32□□□□□ -0.44
CNGA3-204ENST00000409937 STK11Q15831 433 aa12.32□□□□□ -0.44
CNGA3-204ENST00000409937 TAF9Q16594 264 aa12.32□□□□□ -0.44
CNGA3-204ENST00000409937 RXFP4Q8TDU9 374 aa12.32□□□□□ -0.44
CNGA3-204ENST00000409937 ADAMTS17Q8TE56 1095 aa12.32□□□□□ -0.44
CNGA3-204ENST00000409937 SHDQ96IW2 340 aa12.32□□□□□ -0.44
CNGA3-204ENST00000409937 AQP10Q96PS8 301 aa12.32□□□□□ -0.44
CNGA3-204ENST00000409937 FAAP24Q9BTP7 215 aa12.32□□□□□ -0.44
CNGA3-204ENST00000409937 DEFB126Q9BYW3 111 aa12.32□□□□□ -0.44
CNGA3-204ENST00000409937 FBXL17Q9UF56 701 aa12.32□□□□□ -0.44
CNGA3-204ENST00000409937 FAM230AA0A1W2PPH8 454 aa12.32□□□□□ -0.44
CNGA3-204ENST00000409937 XRCC2O43543 280 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms