RNA–Protein interactions for RNA: ENST00000409817.1

CXCR4-202, Transcript of C-X-C motif chemokine receptor 4, humanhuman

APPRIS P3 BASIC

Gene CXCR4, Length 1,895 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-202ENST00000409817 GINS4Q9BRT9 223 aa6.53□□□□□ -1.36
CXCR4-202ENST00000409817 BEX2Q9BXY8 128 aa6.53□□□□□ -1.36
CXCR4-202ENST00000409817 LPAR5Q9H1C0 372 aa6.53□□□□□ -1.36
CXCR4-202ENST00000409817 ZNF552Q9H707 407 aaPredicted RBP6.53□□□□□ -1.36
CXCR4-202ENST00000409817 ZDHHC11Q9H8X9 412 aa6.53□□□□□ -1.36
CXCR4-202ENST00000409817 PIGLQ9Y2B2 252 aa6.53□□□□□ -1.36
CXCR4-202ENST00000409817 TRGV5A0A0B4J1U4 118 aa6.52□□□□□ -1.37
CXCR4-202ENST00000409817 IGKV1-9A0A0C4DH69 117 aa6.52□□□□□ -1.37
CXCR4-202ENST00000409817 SPAARA0A1B0GVQ0 90 aa6.52□□□□□ -1.37
CXCR4-202ENST00000409817 TMEM235A6NFC5 223 aa6.52□□□□□ -1.37
CXCR4-202ENST00000409817 CDC14BO60729 498 aa6.52□□□□□ -1.37
CXCR4-202ENST00000409817 CA11O75493 328 aa6.52□□□□□ -1.37
CXCR4-202ENST00000409817 LCATP04180 440 aa6.52□□□□□ -1.37
CXCR4-202ENST00000409817 CEACAM1P13688 526 aa6.52□□□□□ -1.37
CXCR4-202ENST00000409817 RFC3P40938 356 aa6.52□□□□□ -1.37
CXCR4-202ENST00000409817 PTGFRP43088 359 aa6.52□□□□□ -1.37
CXCR4-202ENST00000409817 TNFSF10P50591 281 aa6.52□□□□□ -1.37
CXCR4-202ENST00000409817 SRYQ05066 204 aa6.52□□□□□ -1.37
CXCR4-202ENST00000409817 MOGAT2Q3SYC2 334 aa6.52□□□□□ -1.37
CXCR4-202ENST00000409817 CDNFQ49AH0 187 aa6.52□□□□□ -1.37
CXCR4-202ENST00000409817 IGFL2Q6UWQ7 119 aa6.52□□□□□ -1.37
CXCR4-202ENST00000409817 NAA40Q86UY6 237 aa6.52□□□□□ -1.37
CXCR4-202ENST00000409817 SKA3Q8IX90 412 aa6.52□□□□□ -1.37
CXCR4-202ENST00000409817 FAM89BQ8N5H3 189 aa6.52□□□□□ -1.37
CXCR4-202ENST00000409817 ASCC1Q8N9N2 400 aaKnown RBP6.52□□□□□ -1.37
CXCR4-202ENST00000409817 CHST4Q8NCG5 386 aa6.52□□□□□ -1.37
CXCR4-202ENST00000409817 OR11H7Q8NGC8 314 aa6.52□□□□□ -1.37
CXCR4-202ENST00000409817 OR51S1Q8NGJ8 323 aa6.52□□□□□ -1.37
CXCR4-202ENST00000409817 GRPEL2Q8TAA5 225 aa6.52□□□□□ -1.37
CXCR4-202ENST00000409817 SOX7Q9BT81 388 aa6.52□□□□□ -1.37
CXCR4-202ENST00000409817 WNT5BQ9H1J7 359 aa6.52□□□□□ -1.37
CXCR4-202ENST00000409817 GLRX2Q9NS18 164 aa6.52□□□□□ -1.37
CXCR4-202ENST00000409817 DUSP13Q9UII6 198 aa6.52□□□□□ -1.37
CXCR4-202ENST00000409817 ZNF222Q9UK12 451 aa6.52□□□□□ -1.37
CXCR4-202ENST00000409817 ANAPC10Q9UM13 185 aa6.52□□□□□ -1.37
CXCR4-202ENST00000409817 PLEKHA6Q9Y2H5 1048 aa6.52□□□□□ -1.37
CXCR4-202ENST00000409817 WDR87Q6ZQQ6 2873 aa6.52□□□□□ -1.37
CXCR4-202ENST00000409817 E9PLN8 166 aa6.51□□□□□ -1.37
CXCR4-202ENST00000409817 FABP7O15540 132 aa6.51□□□□□ -1.37
CXCR4-202ENST00000409817 ZNF780AO75290 641 aaPredicted RBP6.51□□□□□ -1.37
CXCR4-202ENST00000409817 ATP6V1G1O75348 118 aa6.51□□□□□ -1.37
CXCR4-202ENST00000409817 MPIG6BO95866 241 aa6.51□□□□□ -1.37
CXCR4-202ENST00000409817 DBHP09172 617 aa6.51□□□□□ -1.37
CXCR4-202ENST00000409817 HIST1H1DP16402 221 aaKnown RBP6.51□□□□□ -1.37
CXCR4-202ENST00000409817 FAHP16930 419 aa6.51□□□□□ -1.37
CXCR4-202ENST00000409817 NAT1P18440 290 aa6.51□□□□□ -1.37
CXCR4-202ENST00000409817 CPT2P23786 658 aa6.51□□□□□ -1.37
CXCR4-202ENST00000409817 ARR3P36575 388 aa6.51□□□□□ -1.37
CXCR4-202ENST00000409817 NBL1P41271 181 aa6.51□□□□□ -1.37
CXCR4-202ENST00000409817 OR3A4PP47883 348 aa6.51□□□□□ -1.37
CXCR4-202ENST00000409817 GNG2P59768 71 aa6.51□□□□□ -1.37
CXCR4-202ENST00000409817 RPS27AP62979 156 aaKnown RBP6.51□□□□□ -1.37
CXCR4-202ENST00000409817 IFITM2Q01629 132 aa6.51□□□□□ -1.37
CXCR4-202ENST00000409817 TCF15Q12870 199 aa6.51□□□□□ -1.37
CXCR4-202ENST00000409817 OR8B8Q15620 311 aa6.51□□□□□ -1.37
CXCR4-202ENST00000409817 UBE2V2Q15819 145 aa6.51□□□□□ -1.37
CXCR4-202ENST00000409817 SNAI3Q3KNW1 292 aa6.51□□□□□ -1.37
CXCR4-202ENST00000409817 RNASE10Q5GAN6 216 aaKnown RBP6.51□□□□□ -1.37
CXCR4-202ENST00000409817 CLVS2Q5SYC1 327 aa6.51□□□□□ -1.37
CXCR4-202ENST00000409817 TMEM42Q69YG0 159 aa6.51□□□□□ -1.37
CXCR4-202ENST00000409817 TMPRSS7Q7RTY8 843 aa6.51□□□□□ -1.37
CXCR4-202ENST00000409817 PNPLA5Q7Z6Z6 429 aaPredicted RBP6.51□□□□□ -1.37
CXCR4-202ENST00000409817 FJX1Q86VR8 437 aa6.51□□□□□ -1.37
CXCR4-202ENST00000409817 TUSC5Q8IXB3 177 aa6.51□□□□□ -1.37
CXCR4-202ENST00000409817 FNDC9Q8TBE3 224 aa6.51□□□□□ -1.37
CXCR4-202ENST00000409817 SPSB4Q96A44 273 aa6.51□□□□□ -1.37
CXCR4-202ENST00000409817 RAB3CQ96E17 227 aa6.51□□□□□ -1.37
CXCR4-202ENST00000409817 RADILQ96JH8 1075 aa6.51□□□□□ -1.37
CXCR4-202ENST00000409817 TM2D1Q9BX74 207 aa6.51□□□□□ -1.37
CXCR4-202ENST00000409817 C1QTNF5Q9BXJ0 243 aa6.51□□□□□ -1.37
CXCR4-202ENST00000409817 ZNF436Q9C0F3 470 aaPredicted RBP6.51□□□□□ -1.37
CXCR4-202ENST00000409817 OPA3Q9H6K4 179 aa6.51□□□□□ -1.37
CXCR4-202ENST00000409817 LDAHQ9H6V9 325 aa6.51□□□□□ -1.37
CXCR4-202ENST00000409817 IFT46Q9NQC8 304 aa6.51□□□□□ -1.37
CXCR4-202ENST00000409817 PCDHB16Q9NRJ7 776 aa6.51□□□□□ -1.37
CXCR4-202ENST00000409817 SLC7A10Q9NS82 523 aa6.51□□□□□ -1.37
CXCR4-202ENST00000409817 KLK13Q9UKR3 277 aa6.51□□□□□ -1.37
CXCR4-202ENST00000409817 FLVCR2Q9UPI3 526 aa6.51□□□□□ -1.37
CXCR4-202ENST00000409817 MED13Q9UHV7 2174 aa6.51□□□□□ -1.37
CXCR4-202ENST00000409817 SPEGQ15772 3267 aa6.51□□□□□ -1.37
CXCR4-202ENST00000409817 MUC3AQ02505 3323 aa6.51□□□□□ -1.37
CXCR4-202ENST00000409817 TRAV17A0A0B4J275 112 aa6.51□□□□□ -1.37
CXCR4-202ENST00000409817 A6NL46 340 aa6.51□□□□□ -1.37
CXCR4-202ENST00000409817 SERPINE3A8MV23 424 aa6.51□□□□□ -1.37
CXCR4-202ENST00000409817 PYCARD-AS1I3L0S3 204 aa6.51□□□□□ -1.37
CXCR4-202ENST00000409817 CRTAPO75718 401 aaPredicted RBP6.51□□□□□ -1.37
CXCR4-202ENST00000409817 IGHG3P01860 377 aa6.51□□□□□ -1.37
CXCR4-202ENST00000409817 HPXP02790 462 aa6.51□□□□□ -1.37
CXCR4-202ENST00000409817 AMY2AP04746 511 aa6.51□□□□□ -1.37
CXCR4-202ENST00000409817 SERPINA5P05154 406 aa6.51□□□□□ -1.37
CXCR4-202ENST00000409817 GIPP09681 153 aaPredicted RBP6.51□□□□□ -1.37
CXCR4-202ENST00000409817 RAD52P43351 418 aa6.51□□□□□ -1.37
CXCR4-202ENST00000409817 ARF1P84077 181 aaKnown RBP6.51□□□□□ -1.37
CXCR4-202ENST00000409817 GK2Q14410 553 aaPredicted RBP6.51□□□□□ -1.37
CXCR4-202ENST00000409817 TGIF1Q15583 401 aa6.51□□□□□ -1.37
CXCR4-202ENST00000409817 TMEM177Q53S58 311 aa6.51□□□□□ -1.37
CXCR4-202ENST00000409817 PABPC1L2AQ5JQF8 200 aa6.51□□□□□ -1.37
CXCR4-202ENST00000409817 FAAP20Q6NZ36 180 aa6.51□□□□□ -1.37
CXCR4-202ENST00000409817 TMEM53Q6P2H8 277 aa6.51□□□□□ -1.37
CXCR4-202ENST00000409817 IDO2Q6ZQW0 420 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms