RNA–Protein interactions for RNA: ENST00000409161.5

SHANK2-203, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 1 (best) BASIC

Gene SHANK2, Length 9,208 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-203ENST00000409161 MARCH3Q86UD3 253 aa10.98□□□□□ -0.65
SHANK2-203ENST00000409161 AP5S1Q9NUS5 200 aa10.98□□□□□ -0.65
SHANK2-203ENST00000409161 ZNF407Q9C0G0 2248 aa10.98□□□□□ -0.65
SHANK2-203ENST00000409161 OR2T8A6NH00 312 aa10.98□□□□□ -0.65
SHANK2-203ENST00000409161 ARSAP15289 507 aa10.98□□□□□ -0.65
SHANK2-203ENST00000409161 DUSP5Q16690 384 aa10.98□□□□□ -0.65
SHANK2-203ENST00000409161 SLC39A5Q6ZMH5 540 aa10.98□□□□□ -0.65
SHANK2-203ENST00000409161 STPG2Q8N412 459 aa10.98□□□□□ -0.65
SHANK2-203ENST00000409161 BHLHE23Q8NDY6 225 aa10.98□□□□□ -0.65
SHANK2-203ENST00000409161 NARFLQ9H6Q4 476 aa10.98□□□□□ -0.65
SHANK2-203ENST00000409161 DOCK3Q8IZD9 2030 aa10.98□□□□□ -0.65
SHANK2-203ENST00000409161 RGPD3A6NKT7 1758 aaPredicted RBP10.98□□□□□ -0.65
SHANK2-203ENST00000409161 CD96P40200 585 aa10.98□□□□□ -0.65
SHANK2-203ENST00000409161 SMAD2Q15796 467 aaKnown RBP10.98□□□□□ -0.65
SHANK2-203ENST00000409161 TPSD1Q9BZJ3 242 aa10.98□□□□□ -0.65
SHANK2-203ENST00000409161 SH2D2AQ9NP31 389 aa10.98□□□□□ -0.65
SHANK2-203ENST00000409161 M0R2Z0 102 aa10.98□□□□□ -0.65
SHANK2-203ENST00000409161 FAM87AP0C7U9 286 aa10.98□□□□□ -0.65
SHANK2-203ENST00000409161 EDN3P14138 238 aa10.98□□□□□ -0.65
SHANK2-203ENST00000409161 MYPOPQ86VE0 399 aaPredicted RBP10.98□□□□□ -0.65
SHANK2-203ENST00000409161 C20orf27Q9GZN8 174 aa10.98□□□□□ -0.65
SHANK2-203ENST00000409161 HINT3Q9NQE9 182 aaKnown RBP10.98□□□□□ -0.65
SHANK2-203ENST00000409161 OR2J2O76002 312 aa10.98□□□□□ -0.65
SHANK2-203ENST00000409161 NPPBP16860 134 aa10.98□□□□□ -0.65
SHANK2-203ENST00000409161 LRRC10Q5BKY1 277 aa10.98□□□□□ -0.65
SHANK2-203ENST00000409161 NUDCD2Q8WVJ2 157 aa10.98□□□□□ -0.65
SHANK2-203ENST00000409161 LINC00597Q9H2U6 94 aa10.98□□□□□ -0.65
SHANK2-203ENST00000409161 SMDT1Q9H4I9 107 aa10.98□□□□□ -0.65
SHANK2-203ENST00000409161 NAT8Q9UHE5 227 aa10.98□□□□□ -0.65
SHANK2-203ENST00000409161 ZNF346Q9UL40 294 aaKnown RBP10.98□□□□□ -0.65
SHANK2-203ENST00000409161 GOSR1O95249 250 aa10.98□□□□□ -0.65
SHANK2-203ENST00000409161 FGF9P31371 208 aaPredicted RBP10.98□□□□□ -0.65
SHANK2-203ENST00000409161 RPL29P47914 159 aaKnown RBP10.98□□□□□ -0.65
SHANK2-203ENST00000409161 APOBEC3DQ96AK3 386 aaPredicted RBP10.98□□□□□ -0.65
SHANK2-203ENST00000409161 LPAR3Q9UBY5 353 aa10.98□□□□□ -0.65
SHANK2-203ENST00000409161 VASH2Q86V25 355 aa10.98□□□□□ -0.65
SHANK2-203ENST00000409161 BCORP1Q8N888 145 aa10.98□□□□□ -0.65
SHANK2-203ENST00000409161 GRAMD2BQ96HH9 432 aa10.98□□□□□ -0.65
SHANK2-203ENST00000409161 MS4A18H0YCH9 400 aa10.97□□□□□ -0.65
SHANK2-203ENST00000409161 PGA4P0DJD7 388 aa10.97□□□□□ -0.65
SHANK2-203ENST00000409161 PGA5P0DJD9 388 aa10.97□□□□□ -0.65
SHANK2-203ENST00000409161 MAT1AQ00266 395 aaKnown RBP10.97□□□□□ -0.65
SHANK2-203ENST00000409161 MS4A18Q3C1V0 323 aa10.97□□□□□ -0.65
SHANK2-203ENST00000409161 KHDC1LQ5JSQ8 128 aa10.97□□□□□ -0.65
SHANK2-203ENST00000409161 DPPA3Q6W0C5 159 aa10.97□□□□□ -0.65
SHANK2-203ENST00000409161 OR1L3Q8NH93 324 aa10.97□□□□□ -0.65
SHANK2-203ENST00000409161 MMP24Q9Y5R2 645 aa10.97□□□□□ -0.65
SHANK2-203ENST00000409161 PDE6DO43924 150 aa10.97□□□□□ -0.65
SHANK2-203ENST00000409161 RPL18Q07020 188 aaKnown RBP10.97□□□□□ -0.65
SHANK2-203ENST00000409161 OR2T10Q8NGZ9 312 aa10.97□□□□□ -0.65
SHANK2-203ENST00000409161 FGF13Q92913 245 aa10.97□□□□□ -0.65
SHANK2-203ENST00000409161 PECRQ9BY49 303 aa10.97□□□□□ -0.65
SHANK2-203ENST00000409161 SLC10A3P09131 477 aa10.97□□□□□ -0.65
SHANK2-203ENST00000409161 RPL24P83731 157 aaKnown RBP10.97□□□□□ -0.65
SHANK2-203ENST00000409161 CRYGNQ8WXF5 182 aa10.97□□□□□ -0.65
SHANK2-203ENST00000409161 MOB3AQ96BX8 217 aa10.97□□□□□ -0.65
SHANK2-203ENST00000409161 HIST1H1BP16401 226 aaKnown RBP10.97□□□□□ -0.65
SHANK2-203ENST00000409161 BCL3P20749 454 aa10.97□□□□□ -0.65
SHANK2-203ENST00000409161 DCTDP32321 178 aa10.97□□□□□ -0.65
SHANK2-203ENST00000409161 TMEM37Q8WXS4 190 aa10.97□□□□□ -0.65
SHANK2-203ENST00000409161 NXF2Q9GZY0 626 aaKnown RBP10.97□□□□□ -0.65
SHANK2-203ENST00000409161 ISLRO14498 428 aa10.97□□□□□ -0.65
SHANK2-203ENST00000409161 SCGB1D4Q6XE38 83 aa10.97□□□□□ -0.65
SHANK2-203ENST00000409161 PRRX2Q99811 253 aa10.97□□□□□ -0.65
SHANK2-203ENST00000409161 TMEM9BQ9NQ34 198 aa10.97□□□□□ -0.65
SHANK2-203ENST00000409161 TMEM167BQ9NRX6 74 aa10.97□□□□□ -0.65
SHANK2-203ENST00000409161 CDRT15L2A8MXV6 281 aa10.97□□□□□ -0.65
SHANK2-203ENST00000409161 AKR7A2O43488 359 aa10.97□□□□□ -0.65
SHANK2-203ENST00000409161 SLC6A1P30531 599 aa10.97□□□□□ -0.65
SHANK2-203ENST00000409161 OPRM1P35372 400 aa10.97□□□□□ -0.65
SHANK2-203ENST00000409161 ZNF766Q5HY98 468 aa10.97□□□□□ -0.65
SHANK2-203ENST00000409161 OR2A2Q6IF42 318 aa10.97□□□□□ -0.65
SHANK2-203ENST00000409161 BCDIN3DQ7Z5W3 292 aaKnown RBP10.97□□□□□ -0.65
SHANK2-203ENST00000409161 TMEM99Q8N816 258 aa10.97□□□□□ -0.65
SHANK2-203ENST00000409161 ZNF740Q8NDX6 193 aa10.97□□□□□ -0.65
SHANK2-203ENST00000409161 OR1C1Q15619 314 aa10.97□□□□□ -0.65
SHANK2-203ENST00000409161 TP53RKQ96S44 253 aa10.97□□□□□ -0.65
SHANK2-203ENST00000409161 ZDBF2Q9HCK1 2354 aa10.96□□□□□ -0.65
SHANK2-203ENST00000409161 TNRC6CQ9HCJ0 1690 aaKnown RBP10.96□□□□□ -0.65
SHANK2-203ENST00000409161 TAS1R1Q7RTX1 841 aa10.96□□□□□ -0.65
SHANK2-203ENST00000409161 ZNF552Q9H707 407 aaPredicted RBP10.96□□□□□ -0.65
SHANK2-203ENST00000409161 ZNF785A8K8V0 405 aa10.96□□□□□ -0.65
SHANK2-203ENST00000409161 PYCARD-AS1I3L0S3 204 aa10.96□□□□□ -0.65
SHANK2-203ENST00000409161 HAND1O96004 215 aa10.96□□□□□ -0.65
SHANK2-203ENST00000409161 GYPAP02724 150 aa10.96□□□□□ -0.65
SHANK2-203ENST00000409161 OR10J1P30954 320 aa10.96□□□□□ -0.65
SHANK2-203ENST00000409161 HAAOP46952 286 aa10.96□□□□□ -0.65
SHANK2-203ENST00000409161 ZNF385BQ569K4 471 aa10.96□□□□□ -0.65
SHANK2-203ENST00000409161 C9orf152Q5JTZ5 239 aa10.96□□□□□ -0.65
SHANK2-203ENST00000409161 C12orf49Q9H741 205 aa10.96□□□□□ -0.65
SHANK2-203ENST00000409161 ZNF107Q9UII5 783 aaPredicted RBP10.96□□□□□ -0.65
SHANK2-203ENST00000409161 IGLV3-10A0A075B6K4 115 aa10.96□□□□□ -0.65
SHANK2-203ENST00000409161 SIAH2O43255 324 aa10.96□□□□□ -0.65
SHANK2-203ENST00000409161 FUT3P21217 361 aa10.96□□□□□ -0.65
SHANK2-203ENST00000409161 FGF21Q9NSA1 209 aa10.96□□□□□ -0.65
SHANK2-203ENST00000409161 ZNF256Q9Y2P7 627 aaPredicted RBP10.96□□□□□ -0.65
SHANK2-203ENST00000409161 SDCBPO00560 298 aaPredicted RBP10.96□□□□□ -0.65
SHANK2-203ENST00000409161 KLF7O75840 302 aaPredicted RBP10.96□□□□□ -0.65
SHANK2-203ENST00000409161 NEURL1O76050 574 aa10.96□□□□□ -0.65
SHANK2-203ENST00000409161 ZNF121P58317 390 aaPredicted RBP10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms