RNA–Protein interactions for RNA: ENST00000407637.5

HERC3-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 1 (best) BASIC

Gene HERC3, Length 2,634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-203ENST00000407637 CCL15Q16663 113 aa11.31□□□□□ -0.6
HERC3-203ENST00000407637 C1orf189Q5VU69 101 aa11.31□□□□□ -0.6
HERC3-203ENST00000407637 SLC25A26Q70HW3 274 aa11.31□□□□□ -0.6
HERC3-203ENST00000407637 P4HA3Q7Z4N8 544 aa11.31□□□□□ -0.6
HERC3-203ENST00000407637 LYPD6Q86Y78 171 aa11.31□□□□□ -0.6
HERC3-203ENST00000407637 LRRC75AQ8NAA5 344 aa11.31□□□□□ -0.6
HERC3-203ENST00000407637 OR10A7Q8NGE5 316 aa11.31□□□□□ -0.6
HERC3-203ENST00000407637 SCGB3A2Q96PL1 93 aa11.31□□□□□ -0.6
HERC3-203ENST00000407637 KIAA1456Q9P272 454 aa11.31□□□□□ -0.6
HERC3-203ENST00000407637 AK3Q9UIJ7 227 aa11.31□□□□□ -0.6
HERC3-203ENST00000407637 GPR34Q9UPC5 381 aa11.31□□□□□ -0.6
HERC3-203ENST00000407637 NSG2Q9Y328 171 aa11.31□□□□□ -0.6
HERC3-203ENST00000407637 Q9Y3F1 56 aa11.31□□□□□ -0.6
HERC3-203ENST00000407637 FIGNL2A6NMB9 653 aa11.31□□□□□ -0.6
HERC3-203ENST00000407637 KLF8O95600 359 aaPredicted RBP11.31□□□□□ -0.6
HERC3-203ENST00000407637 ALDH3B1P43353 468 aa11.31□□□□□ -0.6
HERC3-203ENST00000407637 QRFPP83859 136 aa11.31□□□□□ -0.6
HERC3-203ENST00000407637 HSF1Q00613 529 aa11.31□□□□□ -0.6
HERC3-203ENST00000407637 TPGS2Q68CL5 300 aa11.31□□□□□ -0.6
HERC3-203ENST00000407637 TMEM215Q68D42 235 aa11.31□□□□□ -0.6
HERC3-203ENST00000407637 SLC16A14Q7RTX9 510 aa11.31□□□□□ -0.6
HERC3-203ENST00000407637 LHFPL1Q86WI0 220 aa11.31□□□□□ -0.6
HERC3-203ENST00000407637 CATSPERDQ86XM0 798 aa11.31□□□□□ -0.6
HERC3-203ENST00000407637 TMEM25Q86YD3 366 aa11.31□□□□□ -0.6
HERC3-203ENST00000407637 DNASE2BQ8WZ79 361 aa11.31□□□□□ -0.6
HERC3-203ENST00000407637 HAS2Q92819 552 aa11.31□□□□□ -0.6
HERC3-203ENST00000407637 DNAJC4Q9NNZ3 241 aa11.31□□□□□ -0.6
HERC3-203ENST00000407637 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.31□□□□□ -0.6
HERC3-203ENST00000407637 SLC5A6Q9Y289 635 aa11.31□□□□□ -0.6
HERC3-203ENST00000407637 B3GALT5Q9Y2C3 310 aa11.31□□□□□ -0.6
HERC3-203ENST00000407637 TRBV24-1A0A075B6N3 115 aa11.3□□□□□ -0.6
HERC3-203ENST00000407637 A0A0A6YYD4 124 aa11.3□□□□□ -0.6
HERC3-203ENST00000407637 LOC101059948A0A1B0GTJ6 334 aa11.3□□□□□ -0.6
HERC3-203ENST00000407637 GPR137BO60478 399 aa11.3□□□□□ -0.6
HERC3-203ENST00000407637 RAD51DO75771 328 aa11.3□□□□□ -0.6
HERC3-203ENST00000407637 AMY2BP19961 511 aa11.3□□□□□ -0.6
HERC3-203ENST00000407637 EMP2P54851 167 aa11.3□□□□□ -0.6
HERC3-203ENST00000407637 ZP2Q05996 745 aa11.3□□□□□ -0.6
HERC3-203ENST00000407637 WDR25Q64LD2 544 aaPredicted RBP11.3□□□□□ -0.6
HERC3-203ENST00000407637 NOXO1Q8NFA2 376 aa11.3□□□□□ -0.6
HERC3-203ENST00000407637 OR4N2Q8NGD1 307 aa11.3□□□□□ -0.6
HERC3-203ENST00000407637 OR52N4Q8NGI2 321 aa11.3□□□□□ -0.6
HERC3-203ENST00000407637 ELOVL1Q9BW60 279 aa11.3□□□□□ -0.6
HERC3-203ENST00000407637 PARD6AQ9NPB6 346 aa11.3□□□□□ -0.6
HERC3-203ENST00000407637 VAX2Q9UIW0 290 aa11.3□□□□□ -0.6
HERC3-203ENST00000407637 HHLA2Q9UM44 414 aa11.3□□□□□ -0.6
HERC3-203ENST00000407637 OSGIN2Q9Y236 505 aa11.3□□□□□ -0.6
HERC3-203ENST00000407637 HIF3AQ9Y2N7 669 aa11.3□□□□□ -0.6
HERC3-203ENST00000407637 EMC9Q9Y3B6 208 aa11.3□□□□□ -0.6
HERC3-203ENST00000407637 RENP00797 406 aa11.3□□□□□ -0.6
HERC3-203ENST00000407637 HSPB1P04792 205 aaKnown RBP11.3□□□□□ -0.6
HERC3-203ENST00000407637 CT62P0C5K7 136 aa11.3□□□□□ -0.6
HERC3-203ENST00000407637 CD82P27701 267 aa11.3□□□□□ -0.6
HERC3-203ENST00000407637 TFPI2P48307 235 aa11.3□□□□□ -0.6
HERC3-203ENST00000407637 RAC1P63000 192 aa11.3□□□□□ -0.6
HERC3-203ENST00000407637 TLE4Q04727 773 aa11.3□□□□□ -0.6
HERC3-203ENST00000407637 MLF2Q15773 248 aaPredicted RBP11.3□□□□□ -0.6
HERC3-203ENST00000407637 METTL27Q8N6F8 245 aaPredicted RBP11.3□□□□□ -0.6
HERC3-203ENST00000407637 NKAIN3Q8N8D7 197 aa11.3□□□□□ -0.6
HERC3-203ENST00000407637 OR2G3Q8NGZ4 309 aa11.3□□□□□ -0.6
HERC3-203ENST00000407637 FGGYQ96C11 551 aa11.3□□□□□ -0.6
HERC3-203ENST00000407637 MRPL22Q9NWU5 206 aaKnown RBP11.3□□□□□ -0.6
HERC3-203ENST00000407637 LRP12Q9Y561 859 aa11.3□□□□□ -0.6
HERC3-203ENST00000407637 TRPM6Q9BX84 2022 aa11.3□□□□□ -0.6
HERC3-203ENST00000407637 A0A1B0GU03 582 aa11.29□□□□□ -0.6
HERC3-203ENST00000407637 FAM221AA4D161 298 aa11.29□□□□□ -0.6
HERC3-203ENST00000407637 SOCS1O15524 211 aa11.29□□□□□ -0.6
HERC3-203ENST00000407637 IGKV1D-16P01601 117 aa11.29□□□□□ -0.6
HERC3-203ENST00000407637 IL6RP08887 468 aaPredicted RBP11.29□□□□□ -0.6
HERC3-203ENST00000407637 MMP9P14780 707 aa11.29□□□□□ -0.6
HERC3-203ENST00000407637 CEBPBP17676 345 aa11.29□□□□□ -0.6
HERC3-203ENST00000407637 RPL18Q07020 188 aaKnown RBP11.29□□□□□ -0.6
HERC3-203ENST00000407637 PLAC9Q5JTB6 97 aa11.29□□□□□ -0.6
HERC3-203ENST00000407637 COA6Q5JTJ3 125 aaKnown RBP11.29□□□□□ -0.6
HERC3-203ENST00000407637 MORN1Q5T089 497 aa11.29□□□□□ -0.6
HERC3-203ENST00000407637 PLPP4Q5VZY2 271 aa11.29□□□□□ -0.6
HERC3-203ENST00000407637 RABEPKQ7Z6M1 372 aa11.29□□□□□ -0.6
HERC3-203ENST00000407637 ADIPOR2Q86V24 386 aa11.29□□□□□ -0.6
HERC3-203ENST00000407637 OR2AJ1Q8NGZ0 328 aa11.29□□□□□ -0.6
HERC3-203ENST00000407637 TMEM18Q96B42 140 aa11.29□□□□□ -0.6
HERC3-203ENST00000407637 EHFQ9NZC4 300 aa11.29□□□□□ -0.6
HERC3-203ENST00000407637 CACNA1IQ9P0X4 2223 aa11.29□□□□□ -0.6
HERC3-203ENST00000407637 B4DEV8 164 aa11.29□□□□□ -0.6
HERC3-203ENST00000407637 NRG2O14511 850 aaPredicted RBP11.29□□□□□ -0.6
HERC3-203ENST00000407637 LATO43561 262 aa11.29□□□□□ -0.6
HERC3-203ENST00000407637 CYB5R3P00387 301 aaPredicted RBP11.29□□□□□ -0.6
HERC3-203ENST00000407637 IFNA21P01568 189 aa11.29□□□□□ -0.6
HERC3-203ENST00000407637 CD55P08174 381 aa11.29□□□□□ -0.6
HERC3-203ENST00000407637 OR3A2P47893 321 aa11.29□□□□□ -0.6
HERC3-203ENST00000407637 RAB28P51157 221 aa11.29□□□□□ -0.6
HERC3-203ENST00000407637 NOVA1P51513 510 aaKnown RBP11.29□□□□□ -0.6
HERC3-203ENST00000407637 RAB38P57729 211 aa11.29□□□□□ -0.6
HERC3-203ENST00000407637 ZNF117Q03924 483 aa11.29□□□□□ -0.6
HERC3-203ENST00000407637 ZNF74Q16587 644 aa11.29□□□□□ -0.6
HERC3-203ENST00000407637 ZNF506Q5JVG8 444 aa11.29□□□□□ -0.6
HERC3-203ENST00000407637 SLC18B1Q6NT16 456 aa11.29□□□□□ -0.6
HERC3-203ENST00000407637 SPRED2Q7Z698 418 aa11.29□□□□□ -0.6
HERC3-203ENST00000407637 SNIP1Q8TAD8 396 aaKnown RBP11.29□□□□□ -0.6
HERC3-203ENST00000407637 ZNF558Q96NG5 402 aa11.29□□□□□ -0.6
HERC3-203ENST00000407637 ANAPC10Q9UM13 185 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms