RNA–Protein interactions for RNA: ENST00000407422.7

SMARCB1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-204ENST00000407422 FAM71F1Q96KD3 344 aaPredicted RBP15.91■□□□□ 0.14
SMARCB1-204ENST00000407422 RAB3IPQ96QF0 476 aaPredicted RBP15.91■□□□□ 0.14
SMARCB1-204ENST00000407422 ZNF747Q9BV97 191 aa15.91■□□□□ 0.14
SMARCB1-204ENST00000407422 CNTD2Q9H8S5 307 aa15.91■□□□□ 0.14
SMARCB1-204ENST00000407422 GPR84Q9NQS5 396 aa15.91■□□□□ 0.14
SMARCB1-204ENST00000407422 DNAJB11Q9UBS4 358 aa15.91■□□□□ 0.14
SMARCB1-204ENST00000407422 IKZF2Q9UKS7 526 aa15.91■□□□□ 0.14
SMARCB1-204ENST00000407422 TMEM14AQ9Y6G1 99 aa15.91■□□□□ 0.14
SMARCB1-204ENST00000407422 ZNF254O75437 659 aa15.9■□□□□ 0.14
SMARCB1-204ENST00000407422 RHBDL1O75783 438 aa15.9■□□□□ 0.14
SMARCB1-204ENST00000407422 IGLV3-1P01715 115 aa15.9■□□□□ 0.14
SMARCB1-204ENST00000407422 FASP25445 335 aa15.9■□□□□ 0.14
SMARCB1-204ENST00000407422 TGM4P49221 684 aa15.9■□□□□ 0.14
SMARCB1-204ENST00000407422 RASSF2P50749 326 aa15.9■□□□□ 0.14
SMARCB1-204ENST00000407422 RIDAP52758 137 aaKnown RBP15.9■□□□□ 0.14
SMARCB1-204ENST00000407422 CXCR4P61073 352 aa15.9■□□□□ 0.14
SMARCB1-204ENST00000407422 C11orf91Q3C1V1 193 aa15.9■□□□□ 0.14
SMARCB1-204ENST00000407422 ATPAF1Q5TC12 328 aaPredicted RBP15.9■□□□□ 0.14
SMARCB1-204ENST00000407422 C1orf146Q5VVC0 180 aa15.9■□□□□ 0.14
SMARCB1-204ENST00000407422 C12orf73Q69YU5 71 aa15.9■□□□□ 0.14
SMARCB1-204ENST00000407422 Q6YL49 198 aa15.9■□□□□ 0.14
SMARCB1-204ENST00000407422 KRT74Q7RTS7 529 aa15.9■□□□□ 0.14
SMARCB1-204ENST00000407422 ZDHHC13Q8IUH4 622 aa15.9■□□□□ 0.14
SMARCB1-204ENST00000407422 LY6G5BQ8NDX9 201 aa15.9■□□□□ 0.14
SMARCB1-204ENST00000407422 TMEM163Q8TC26 289 aa15.9■□□□□ 0.14
SMARCB1-204ENST00000407422 GATAD2BQ8WXI9 593 aa15.9■□□□□ 0.14
SMARCB1-204ENST00000407422 LRTOMTQ8WZ04 291 aa15.9■□□□□ 0.14
SMARCB1-204ENST00000407422 HIST1H2AAQ96QV6 131 aa15.9■□□□□ 0.14
SMARCB1-204ENST00000407422 IL4I1Q96RQ9 567 aa15.9■□□□□ 0.14
SMARCB1-204ENST00000407422 APOL4Q9BPW4 351 aa15.9■□□□□ 0.14
SMARCB1-204ENST00000407422 PRRG3Q9BZD7 231 aa15.9■□□□□ 0.14
SMARCB1-204ENST00000407422 ADGRL4Q9HBW9 690 aa15.9■□□□□ 0.14
SMARCB1-204ENST00000407422 IGHV1-69DA0A0B4J2H0 117 aa15.9■□□□□ 0.14
SMARCB1-204ENST00000407422 ZNF732B4DXR9 585 aa15.9■□□□□ 0.14
SMARCB1-204ENST00000407422 NDUFB3O43676 98 aa15.9■□□□□ 0.14
SMARCB1-204ENST00000407422 IGHV1-69P01742 117 aa15.9■□□□□ 0.14
SMARCB1-204ENST00000407422 OMGP23515 440 aa15.9■□□□□ 0.14
SMARCB1-204ENST00000407422 PDCD1Q15116 288 aa15.9■□□□□ 0.14
SMARCB1-204ENST00000407422 CDONQ4KMG0 1287 aa15.9■□□□□ 0.14
SMARCB1-204ENST00000407422 NXNL2Q5VZ03 156 aa15.9■□□□□ 0.14
SMARCB1-204ENST00000407422 ZNF322Q6U7Q0 402 aaPredicted RBP15.9■□□□□ 0.14
SMARCB1-204ENST00000407422 PLEKHG7Q6ZR37 379 aa15.9■□□□□ 0.14
SMARCB1-204ENST00000407422 SLC35F2Q8IXU6 374 aa15.9■□□□□ 0.14
SMARCB1-204ENST00000407422 GABARAPL1Q9H0R8 117 aa15.9■□□□□ 0.14
SMARCB1-204ENST00000407422 OR51I2Q9H344 312 aa15.9■□□□□ 0.14
SMARCB1-204ENST00000407422 ACOXLQ9NUZ1 547 aa15.9■□□□□ 0.14
SMARCB1-204ENST00000407422 H2AFY2Q9P0M6 372 aaPredicted RBP15.9■□□□□ 0.14
SMARCB1-204ENST00000407422 ONECUT1Q9UBC0 465 aa15.9■□□□□ 0.14
SMARCB1-204ENST00000407422 NUFIP1Q9UHK0 495 aaKnown RBP15.9■□□□□ 0.14
SMARCB1-204ENST00000407422 SRSF10O75494 262 aaKnown RBP15.89■□□□□ 0.13
SMARCB1-204ENST00000407422 TTRP02766 147 aa15.89■□□□□ 0.13
SMARCB1-204ENST00000407422 MELTFP08582 738 aa15.89■□□□□ 0.13
SMARCB1-204ENST00000407422 FAHP16930 419 aa15.89■□□□□ 0.13
SMARCB1-204ENST00000407422 POLR2IP36954 125 aaKnown RBP15.89■□□□□ 0.13
SMARCB1-204ENST00000407422 GNG3P63215 75 aa15.89■□□□□ 0.13
SMARCB1-204ENST00000407422 PRB3Q04118 309 aaPredicted RBP15.89■□□□□ 0.13
SMARCB1-204ENST00000407422 DGUOKQ16854 277 aa15.89■□□□□ 0.13
SMARCB1-204ENST00000407422 ZNF829Q3KNS6 432 aaPredicted RBP15.89■□□□□ 0.13
SMARCB1-204ENST00000407422 CEACAM21Q3KPI0 293 aa15.89■□□□□ 0.13
SMARCB1-204ENST00000407422 VMO1Q7Z5L0 202 aa15.89■□□□□ 0.13
SMARCB1-204ENST00000407422 ANGPTL6Q8NI99 470 aa15.89■□□□□ 0.13
SMARCB1-204ENST00000407422 DUS3LQ96G46 650 aaKnown RBP15.89■□□□□ 0.13
SMARCB1-204ENST00000407422 GAFA1Q96PS6 74 aa15.89■□□□□ 0.13
SMARCB1-204ENST00000407422 CIB1Q99828 191 aa15.89■□□□□ 0.13
SMARCB1-204ENST00000407422 UNKLQ9H9P5 680 aaKnown RBP15.89■□□□□ 0.13
SMARCB1-204ENST00000407422 NOX4Q9NPH5 578 aa15.89■□□□□ 0.13
SMARCB1-204ENST00000407422 PIGLQ9Y2B2 252 aa15.89■□□□□ 0.13
SMARCB1-204ENST00000407422 KPTNQ9Y664 436 aa15.89■□□□□ 0.13
SMARCB1-204ENST00000407422 FAM181BA6NEQ2 426 aa15.88■□□□□ 0.13
SMARCB1-204ENST00000407422 SLC22A31A6NKX4 558 aa15.88■□□□□ 0.13
SMARCB1-204ENST00000407422 DLX1P56177 255 aa15.88■□□□□ 0.13
SMARCB1-204ENST00000407422 RIPPLY1Q0D2K3 151 aa15.88■□□□□ 0.13
SMARCB1-204ENST00000407422 LRRC10Q5BKY1 277 aa15.88■□□□□ 0.13
SMARCB1-204ENST00000407422 ZNF788Q6ZQV5 615 aa15.88■□□□□ 0.13
SMARCB1-204ENST00000407422 MOB3CQ70IA8 216 aa15.88■□□□□ 0.13
SMARCB1-204ENST00000407422 THAP5Q7Z6K1 395 aa15.88■□□□□ 0.13
SMARCB1-204ENST00000407422 SGMS2Q8NHU3 365 aa15.88■□□□□ 0.13
SMARCB1-204ENST00000407422 CHIAQ9BZP6 476 aa15.88■□□□□ 0.13
SMARCB1-204ENST00000407422 SEMA6AQ9H2E6 1030 aa15.88■□□□□ 0.13
SMARCB1-204ENST00000407422 GTF2A1LQ9UNN4 478 aa15.88■□□□□ 0.13
SMARCB1-204ENST00000407422 A0A0U1RQK1 487 aa15.87■□□□□ 0.13
SMARCB1-204ENST00000407422 ATP5HO75947 161 aa15.87■□□□□ 0.13
SMARCB1-204ENST00000407422 ATP6V1B1P15313 513 aa15.87■□□□□ 0.13
SMARCB1-204ENST00000407422 MDKP21741 143 aaPredicted RBP15.87■□□□□ 0.13
SMARCB1-204ENST00000407422 GLRA1P23415 457 aa15.87■□□□□ 0.13
SMARCB1-204ENST00000407422 IL13RA1P78552 427 aa15.87■□□□□ 0.13
SMARCB1-204ENST00000407422 PLCXD3Q63HM9 321 aa15.87■□□□□ 0.13
SMARCB1-204ENST00000407422 PIP4P2Q8N4L2 257 aa15.87■□□□□ 0.13
SMARCB1-204ENST00000407422 H1FXQ92522 213 aaKnown RBP15.87■□□□□ 0.13
SMARCB1-204ENST00000407422 TMIGD2Q96BF3 282 aa15.87■□□□□ 0.13
SMARCB1-204ENST00000407422 DCTN5Q9BTE1 182 aa15.87■□□□□ 0.13
SMARCB1-204ENST00000407422 DNTTIP1Q9H147 329 aa15.87■□□□□ 0.13
SMARCB1-204ENST00000407422 CLN6Q9NWW5 311 aa15.87■□□□□ 0.13
SMARCB1-204ENST00000407422 NLKQ9UBE8 527 aa15.87■□□□□ 0.13
SMARCB1-204ENST00000407422 MRM2Q9UI43 246 aaKnown RBP15.87■□□□□ 0.13
SMARCB1-204ENST00000407422 CMYA5Q8N3K9 4069 aa15.87■□□□□ 0.13
SMARCB1-204ENST00000407422 NKX6-3A6NJ46 265 aa15.86■□□□□ 0.13
SMARCB1-204ENST00000407422 OR2AT4A6NND4 320 aa15.86■□□□□ 0.13
SMARCB1-204ENST00000407422 LOC110117498-PIK3R3F6TDL0 507 aa15.86■□□□□ 0.13
SMARCB1-204ENST00000407422 DHRS3O75911 302 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms