RNA–Protein interactions for RNA: ENST00000407082.3

SMARCB1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 5 BASIC

Gene SMARCB1, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-203ENST00000407082 MAP1AP78559 2803 aaPredicted RBP11.27□□□□□ -0.6
SMARCB1-203ENST00000407082 PRRC2AP48634 2157 aaKnown RBP11.27□□□□□ -0.6
SMARCB1-203ENST00000407082 DHRS7CA6NNS2 312 aa11.27□□□□□ -0.61
SMARCB1-203ENST00000407082 TRAPPC6AO75865 159 aa11.27□□□□□ -0.61
SMARCB1-203ENST00000407082 WISP2O76076 250 aa11.27□□□□□ -0.61
SMARCB1-203ENST00000407082 KDM4BO94953 1096 aa11.27□□□□□ -0.61
SMARCB1-203ENST00000407082 OPN1LWP04000 364 aa11.27□□□□□ -0.61
SMARCB1-203ENST00000407082 CD3DP04234 171 aa11.27□□□□□ -0.61
SMARCB1-203ENST00000407082 AMY2AP04746 511 aa11.27□□□□□ -0.61
SMARCB1-203ENST00000407082 HCKP08631 526 aa11.27□□□□□ -0.61
SMARCB1-203ENST00000407082 CXCL3P19876 107 aa11.27□□□□□ -0.61
SMARCB1-203ENST00000407082 CARD18P57730 90 aa11.27□□□□□ -0.61
SMARCB1-203ENST00000407082 RAB14P61106 215 aa11.27□□□□□ -0.61
SMARCB1-203ENST00000407082 PCBD1P61457 104 aa11.27□□□□□ -0.61
SMARCB1-203ENST00000407082 HIST1H3AP68431 136 aa11.27□□□□□ -0.61
SMARCB1-203ENST00000407082 DHODHQ02127 395 aa11.27□□□□□ -0.61
SMARCB1-203ENST00000407082 FGL1Q08830 312 aa11.27□□□□□ -0.61
SMARCB1-203ENST00000407082 SCRN3Q0VDG4 424 aa11.27□□□□□ -0.61
SMARCB1-203ENST00000407082 IKZF1Q13422 519 aa11.27□□□□□ -0.61
SMARCB1-203ENST00000407082 PPA1Q15181 289 aa11.27□□□□□ -0.61
SMARCB1-203ENST00000407082 ZNF260Q3ZCT1 412 aa11.27□□□□□ -0.61
SMARCB1-203ENST00000407082 RNASE10Q5GAN6 216 aaKnown RBP11.27□□□□□ -0.61
SMARCB1-203ENST00000407082 HIST2H3PS2Q5TEC6 136 aa11.27□□□□□ -0.61
SMARCB1-203ENST00000407082 OTPQ5XKR4 325 aa11.27□□□□□ -0.61
SMARCB1-203ENST00000407082 LIN54Q6MZP7 749 aa11.27□□□□□ -0.61
SMARCB1-203ENST00000407082 SEZ6L2Q6UXD5 910 aa11.27□□□□□ -0.61
SMARCB1-203ENST00000407082 Q6ZTK2 550 aa11.27□□□□□ -0.61
SMARCB1-203ENST00000407082 HIST2H3AQ71DI3 136 aa11.27□□□□□ -0.61
SMARCB1-203ENST00000407082 UTS2BQ765I0 119 aa11.27□□□□□ -0.61
SMARCB1-203ENST00000407082 ANGPTL5Q86XS5 388 aa11.27□□□□□ -0.61
SMARCB1-203ENST00000407082 C20orf196Q8IYI0 205 aa11.27□□□□□ -0.61
SMARCB1-203ENST00000407082 ZDHHC22Q8N966 263 aa11.27□□□□□ -0.61
SMARCB1-203ENST00000407082 UXS1Q8NBZ7 420 aa11.27□□□□□ -0.61
SMARCB1-203ENST00000407082 OR8B12Q8NGG6 310 aa11.27□□□□□ -0.61
SMARCB1-203ENST00000407082 OR56B1Q8NGI3 324 aa11.27□□□□□ -0.61
SMARCB1-203ENST00000407082 OR52H1Q8NGJ2 320 aa11.27□□□□□ -0.61
SMARCB1-203ENST00000407082 OR51A2Q8NGJ7 313 aa11.27□□□□□ -0.61
SMARCB1-203ENST00000407082 OR51S1Q8NGJ8 323 aa11.27□□□□□ -0.61
SMARCB1-203ENST00000407082 OR10R2Q8NGX6 335 aa11.27□□□□□ -0.61
SMARCB1-203ENST00000407082 TNFAIP8L1Q8WVP5 186 aa11.27□□□□□ -0.61
SMARCB1-203ENST00000407082 SNAPC3Q92966 411 aa11.27□□□□□ -0.61
SMARCB1-203ENST00000407082 ADAT3Q96EY9 351 aaPredicted RBP11.27□□□□□ -0.61
SMARCB1-203ENST00000407082 GPER1Q99527 375 aa11.27□□□□□ -0.61
SMARCB1-203ENST00000407082 S100A13Q99584 98 aa11.27□□□□□ -0.61
SMARCB1-203ENST00000407082 DEFB127Q9H1M4 99 aa11.27□□□□□ -0.61
SMARCB1-203ENST00000407082 OR10A2Q9H208 303 aa11.27□□□□□ -0.61
SMARCB1-203ENST00000407082 ZDHHC11Q9H8X9 412 aa11.27□□□□□ -0.61
SMARCB1-203ENST00000407082 BEX1Q9HBH7 125 aa11.27□□□□□ -0.61
SMARCB1-203ENST00000407082 GPR84Q9NQS5 396 aa11.27□□□□□ -0.61
SMARCB1-203ENST00000407082 SLC2A8Q9NY64 477 aa11.27□□□□□ -0.61
SMARCB1-203ENST00000407082 MRPS28Q9Y2Q9 187 aaKnown RBP11.27□□□□□ -0.61
SMARCB1-203ENST00000407082 FLVCR1Q9Y5Y0 555 aa11.27□□□□□ -0.61
SMARCB1-203ENST00000407082 TMEM82A0PJX8 343 aa11.26□□□□□ -0.61
SMARCB1-203ENST00000407082 HMSDA8MTL9 139 aa11.26□□□□□ -0.61
SMARCB1-203ENST00000407082 TMEM14DPA8MWL7 114 aa11.26□□□□□ -0.61
SMARCB1-203ENST00000407082 SMLR1H3BR10 107 aa11.26□□□□□ -0.61
SMARCB1-203ENST00000407082 NOS1APO75052 506 aaPredicted RBP11.26□□□□□ -0.61
SMARCB1-203ENST00000407082 IFNA6P05013 189 aa11.26□□□□□ -0.61
SMARCB1-203ENST00000407082 CELA3AP09093 270 aa11.26□□□□□ -0.61
SMARCB1-203ENST00000407082 CST2P09228 141 aa11.26□□□□□ -0.61
SMARCB1-203ENST00000407082 ANXA7P20073 488 aaKnown RBP11.26□□□□□ -0.61
SMARCB1-203ENST00000407082 KLK2P20151 261 aa11.26□□□□□ -0.61
SMARCB1-203ENST00000407082 CDAP32320 146 aa11.26□□□□□ -0.61
SMARCB1-203ENST00000407082 HTR2BP41595 481 aa11.26□□□□□ -0.61
SMARCB1-203ENST00000407082 TSPAN5P62079 268 aa11.26□□□□□ -0.61
SMARCB1-203ENST00000407082 STK11Q15831 433 aa11.26□□□□□ -0.61
SMARCB1-203ENST00000407082 CDNFQ49AH0 187 aa11.26□□□□□ -0.61
SMARCB1-203ENST00000407082 C4orf46Q504U0 113 aa11.26□□□□□ -0.61
SMARCB1-203ENST00000407082 Q5BKY6 102 aa11.26□□□□□ -0.61
SMARCB1-203ENST00000407082 TMEM255AQ5JRV8 349 aa11.26□□□□□ -0.61
SMARCB1-203ENST00000407082 ZBTB37Q5TC79 503 aa11.26□□□□□ -0.61
SMARCB1-203ENST00000407082 FAM27BQ5VT28 67 aa11.26□□□□□ -0.61
SMARCB1-203ENST00000407082 FAHD2BQ6P2I3 314 aaPredicted RBP11.26□□□□□ -0.61
SMARCB1-203ENST00000407082 TEX261Q6UWH6 196 aa11.26□□□□□ -0.61
SMARCB1-203ENST00000407082 FAM57BQ71RH2 274 aa11.26□□□□□ -0.61
SMARCB1-203ENST00000407082 TMEM200AQ86VY9 491 aa11.26□□□□□ -0.61
SMARCB1-203ENST00000407082 GPR137CQ8N3F9 429 aa11.26□□□□□ -0.61
SMARCB1-203ENST00000407082 BPIFB2Q8N4F0 458 aa11.26□□□□□ -0.61
SMARCB1-203ENST00000407082 STEAP2Q8NFT2 490 aa11.26□□□□□ -0.61
SMARCB1-203ENST00000407082 OR2AK2Q8NG84 335 aa11.26□□□□□ -0.61
SMARCB1-203ENST00000407082 OR52N4Q8NGI2 321 aa11.26□□□□□ -0.61
SMARCB1-203ENST00000407082 OR4D6Q8NGJ1 314 aa11.26□□□□□ -0.61
SMARCB1-203ENST00000407082 OR13C9Q8NGT0 318 aa11.26□□□□□ -0.61
SMARCB1-203ENST00000407082 CA5BP1Q8WTZ4 195 aa11.26□□□□□ -0.61
SMARCB1-203ENST00000407082 NRGNQ92686 78 aa11.26□□□□□ -0.61
SMARCB1-203ENST00000407082 FAHD2AQ96GK7 314 aa11.26□□□□□ -0.61
SMARCB1-203ENST00000407082 SFXN2Q96NB2 322 aa11.26□□□□□ -0.61
SMARCB1-203ENST00000407082 SEC22CQ9BRL7 303 aa11.26□□□□□ -0.61
SMARCB1-203ENST00000407082 ZNF416Q9BWM5 594 aa11.26□□□□□ -0.61
SMARCB1-203ENST00000407082 RBM24Q9BX46 236 aaKnown RBP11.26□□□□□ -0.61
SMARCB1-203ENST00000407082 PNRC2Q9NPJ4 139 aaKnown RBP11.26□□□□□ -0.61
SMARCB1-203ENST00000407082 ELF5Q9UKW6 265 aaPredicted RBP11.26□□□□□ -0.61
SMARCB1-203ENST00000407082 MEMO1Q9Y316 297 aa11.26□□□□□ -0.61
SMARCB1-203ENST00000407082 U3KQ87 197 aa11.26□□□□□ -0.61
SMARCB1-203ENST00000407082 ALPK2Q86TB3 2170 aa11.26□□□□□ -0.61
SMARCB1-203ENST00000407082 KIAA1549Q9HCM3 1950 aa11.25□□□□□ -0.61
SMARCB1-203ENST00000407082 A0A0J9YW62 118 aa11.25□□□□□ -0.61
SMARCB1-203ENST00000407082 OR6C65A6NJZ3 312 aa11.25□□□□□ -0.61
SMARCB1-203ENST00000407082 F5H5P2 479 aa11.25□□□□□ -0.61
SMARCB1-203ENST00000407082 H3BUI4 141 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms