RNA–Protein interactions for RNA: ENST00000404909.5

RTN4-208, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,102 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-208ENST00000404909 RBP2P50120 134 aa3.18□□□□□ -1.9
RTN4-208ENST00000404909 MMP15P51511 669 aa3.18□□□□□ -1.9
RTN4-208ENST00000404909 PSG7Q13046 419 aa3.18□□□□□ -1.9
RTN4-208ENST00000404909 C1orf100Q5SVJ3 147 aa3.18□□□□□ -1.9
RTN4-208ENST00000404909 TMEM69Q5SWH9 247 aa3.18□□□□□ -1.9
RTN4-208ENST00000404909 FAM166AQ6J272 317 aa3.18□□□□□ -1.9
RTN4-208ENST00000404909 RGS7BPQ6MZT1 257 aaPredicted RBP3.18□□□□□ -1.9
RTN4-208ENST00000404909 SLC22A25Q6T423 547 aa3.18□□□□□ -1.9
RTN4-208ENST00000404909 TMEM108Q6UXF1 575 aa3.18□□□□□ -1.9
RTN4-208ENST00000404909 C1QL2Q7Z5L3 287 aa3.18□□□□□ -1.9
RTN4-208ENST00000404909 ZDHHC23Q8IYP9 409 aa3.18□□□□□ -1.9
RTN4-208ENST00000404909 Q8N402 240 aa3.18□□□□□ -1.9
RTN4-208ENST00000404909 CSNK2A3Q8NEV1 391 aa3.18□□□□□ -1.9
RTN4-208ENST00000404909 OR8S1Q8NH09 359 aa3.18□□□□□ -1.9
RTN4-208ENST00000404909 LILRB4Q8NHJ6 448 aa3.18□□□□□ -1.9
RTN4-208ENST00000404909 UBASH3BQ8TF42 649 aa3.18□□□□□ -1.9
RTN4-208ENST00000404909 GCDHQ92947 438 aaPredicted RBP3.18□□□□□ -1.9
RTN4-208ENST00000404909 SPSB1Q96BD6 273 aa3.18□□□□□ -1.9
RTN4-208ENST00000404909 SLC25A38Q96DW6 304 aa3.18□□□□□ -1.9
RTN4-208ENST00000404909 MRI1Q9BV20 369 aa3.18□□□□□ -1.9
RTN4-208ENST00000404909 BCL2L14Q9BZR8 327 aa3.18□□□□□ -1.9
RTN4-208ENST00000404909 OPA3Q9H6K4 179 aa3.18□□□□□ -1.9
RTN4-208ENST00000404909 ZMAT3Q9HA38 289 aaKnown RBP3.18□□□□□ -1.9
RTN4-208ENST00000404909 MOV10Q9HCE1 1003 aaKnown RBP3.18□□□□□ -1.9
RTN4-208ENST00000404909 KCNJ16Q9NPI9 418 aa3.18□□□□□ -1.9
RTN4-208ENST00000404909 POU2F3Q9UKI9 436 aa3.18□□□□□ -1.9
RTN4-208ENST00000404909 CENPEQ02224 2701 aa3.18□□□□□ -1.9
RTN4-208ENST00000404909 DOPEY1Q5JWR5 2465 aa3.18□□□□□ -1.9
RTN4-208ENST00000404909 A0A1B0GUH1 482 aa3.18□□□□□ -1.9
RTN4-208ENST00000404909 ZNF732B4DXR9 585 aa3.18□□□□□ -1.9
RTN4-208ENST00000404909 KDM4BO94953 1096 aa3.18□□□□□ -1.9
RTN4-208ENST00000404909 MPIG6BO95866 241 aa3.18□□□□□ -1.9
RTN4-208ENST00000404909 THBDP07204 575 aa3.18□□□□□ -1.9
RTN4-208ENST00000404909 VSIG8P0DPA2 414 aa3.18□□□□□ -1.9
RTN4-208ENST00000404909 PTHLHP12272 177 aa3.18□□□□□ -1.9
RTN4-208ENST00000404909 PRF1P14222 555 aa3.18□□□□□ -1.9
RTN4-208ENST00000404909 RAC2P15153 192 aa3.18□□□□□ -1.9
RTN4-208ENST00000404909 SERPINA2P20848 420 aa3.18□□□□□ -1.9
RTN4-208ENST00000404909 HAAOP46952 286 aa3.18□□□□□ -1.9
RTN4-208ENST00000404909 FUT6P51993 359 aa3.18□□□□□ -1.9
RTN4-208ENST00000404909 ATP1B3P54709 279 aa3.18□□□□□ -1.9
RTN4-208ENST00000404909 IFITM3Q01628 133 aa3.18□□□□□ -1.9
RTN4-208ENST00000404909 BSPH1Q075Z2 132 aa3.18□□□□□ -1.9
RTN4-208ENST00000404909 BAK1Q16611 211 aa3.18□□□□□ -1.9
RTN4-208ENST00000404909 ZNF718Q3SXZ3 478 aa3.18□□□□□ -1.9
RTN4-208ENST00000404909 TMEM42Q69YG0 159 aa3.18□□□□□ -1.9
RTN4-208ENST00000404909 ADAM5Q6NVV9 412 aa3.18□□□□□ -1.9
RTN4-208ENST00000404909 XKRXQ6PP77 449 aa3.18□□□□□ -1.9
RTN4-208ENST00000404909 FBXW12Q6X9E4 464 aa3.18□□□□□ -1.9
RTN4-208ENST00000404909 Q6ZSR3 168 aa3.18□□□□□ -1.9
RTN4-208ENST00000404909 FAM169BQ8N8A8 192 aa3.18□□□□□ -1.9
RTN4-208ENST00000404909 ACBD4Q8NC06 268 aa3.18□□□□□ -1.9
RTN4-208ENST00000404909 TMEM104Q8NE00 496 aa3.18□□□□□ -1.9
RTN4-208ENST00000404909 OR10AD1Q8NGE0 317 aa3.18□□□□□ -1.9
RTN4-208ENST00000404909 MARS2Q96GW9 593 aaKnown RBP3.18□□□□□ -1.9
RTN4-208ENST00000404909 RNF170Q96K19 258 aa3.18□□□□□ -1.9
RTN4-208ENST00000404909 ABHD1Q96SE0 405 aa3.18□□□□□ -1.9
RTN4-208ENST00000404909 SYT3Q9BQG1 590 aa3.18□□□□□ -1.9
RTN4-208ENST00000404909 SRRQ9GZT4 340 aa3.18□□□□□ -1.9
RTN4-208ENST00000404909 SPEF1Q9Y4P9 236 aa3.18□□□□□ -1.9
RTN4-208ENST00000404909 ETV7Q9Y603 341 aa3.18□□□□□ -1.9
RTN4-208ENST00000404909 LRBAP50851 2863 aa3.18□□□□□ -1.9
RTN4-208ENST00000404909 SPG11Q96JI7 2443 aa3.18□□□□□ -1.9
RTN4-208ENST00000404909 TRAV18A0A075B6X5 111 aa3.18□□□□□ -1.9
RTN4-208ENST00000404909 J3QW42 95 aa3.18□□□□□ -1.9
RTN4-208ENST00000404909 CTAG2O75638 210 aa3.18□□□□□ -1.9
RTN4-208ENST00000404909 BPNT1O95861 308 aa3.18□□□□□ -1.9
RTN4-208ENST00000404909 ALDOBP05062 364 aa3.18□□□□□ -1.9
RTN4-208ENST00000404909 FCER2P06734 321 aa3.18□□□□□ -1.9
RTN4-208ENST00000404909 INPP1P49441 399 aa3.18□□□□□ -1.9
RTN4-208ENST00000404909 GMFBP60983 142 aa3.18□□□□□ -1.9
RTN4-208ENST00000404909 RSU1Q15404 277 aa3.18□□□□□ -1.9
RTN4-208ENST00000404909 TRIQKQ629K1 86 aa3.18□□□□□ -1.9
RTN4-208ENST00000404909 LHFPL2Q6ZUX7 228 aa3.18□□□□□ -1.9
RTN4-208ENST00000404909 LRP11Q86VZ4 500 aa3.18□□□□□ -1.9
RTN4-208ENST00000404909 LYPD6Q86Y78 171 aa3.18□□□□□ -1.9
RTN4-208ENST00000404909 CHST4Q8NCG5 386 aa3.18□□□□□ -1.9
RTN4-208ENST00000404909 GALNT11Q8NCW6 608 aa3.18□□□□□ -1.9
RTN4-208ENST00000404909 HPSE2Q8WWQ2 592 aa3.18□□□□□ -1.9
RTN4-208ENST00000404909 RAB40AQ8WXH6 277 aa3.18□□□□□ -1.9
RTN4-208ENST00000404909 HAVCR1Q96D42 359 aa3.18□□□□□ -1.9
RTN4-208ENST00000404909 CPNE2Q96FN4 548 aaPredicted RBP3.18□□□□□ -1.9
RTN4-208ENST00000404909 LRRC46Q96FV0 321 aa3.18□□□□□ -1.9
RTN4-208ENST00000404909 SDHCQ99643 169 aaPredicted RBP3.18□□□□□ -1.9
RTN4-208ENST00000404909 USB1Q9BQ65 265 aaKnown RBP3.18□□□□□ -1.9
RTN4-208ENST00000404909 MSL2Q9HCI7 577 aa3.18□□□□□ -1.9
RTN4-208ENST00000404909 DIABLOQ9NR28 239 aa3.18□□□□□ -1.9
RTN4-208ENST00000404909 NDRG3Q9UGV2 375 aa3.18□□□□□ -1.9
RTN4-208ENST00000404909 METTL21EPA6NDL7 271 aa3.17□□□□□ -1.9
RTN4-208ENST00000404909 DPRXA6NFQ7 191 aa3.17□□□□□ -1.9
RTN4-208ENST00000404909 TUBAL3A6NHL2 446 aa3.17□□□□□ -1.9
RTN4-208ENST00000404909 H0YL77 283 aa3.17□□□□□ -1.9
RTN4-208ENST00000404909 PYCARD-AS1I3L0S3 204 aa3.17□□□□□ -1.9
RTN4-208ENST00000404909 ICMTO60725 284 aa3.17□□□□□ -1.9
RTN4-208ENST00000404909 TMEM127O75204 238 aa3.17□□□□□ -1.9
RTN4-208ENST00000404909 UPK1BO75841 260 aa3.17□□□□□ -1.9
RTN4-208ENST00000404909 ALX3O95076 343 aa3.17□□□□□ -1.9
RTN4-208ENST00000404909 HTR3BO95264 441 aa3.17□□□□□ -1.9
RTN4-208ENST00000404909 CST4P01036 141 aa3.17□□□□□ -1.9
RTN4-208ENST00000404909 CSTBP04080 98 aaKnown RBP3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms