RNA–Protein interactions for RNA: ENST00000404424.5

CLIP4-204, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP4, Length 2,480 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-204ENST00000404424 HAS2Q92819 552 aa9.43□□□□□ -0.9
CLIP4-204ENST00000404424 LYZL4Q96KX0 146 aa9.43□□□□□ -0.9
CLIP4-204ENST00000404424 CHST5Q9GZS9 411 aa9.43□□□□□ -0.9
CLIP4-204ENST00000404424 UQCC1Q9NVA1 299 aa9.43□□□□□ -0.9
CLIP4-204ENST00000404424 ZNF175Q9Y473 711 aa9.43□□□□□ -0.9
CLIP4-204ENST00000404424 SDCBPO00560 298 aaPredicted RBP9.43□□□□□ -0.9
CLIP4-204ENST00000404424 RRP8O43159 456 aaKnown RBP9.43□□□□□ -0.9
CLIP4-204ENST00000404424 MTRF1O75570 445 aaKnown RBP9.43□□□□□ -0.9
CLIP4-204ENST00000404424 VAMP5O95183 116 aa9.43□□□□□ -0.9
CLIP4-204ENST00000404424 HTR3BO95264 441 aa9.43□□□□□ -0.9
CLIP4-204ENST00000404424 IFNA2P01563 188 aa9.43□□□□□ -0.9
CLIP4-204ENST00000404424 HPNP05981 417 aa9.43□□□□□ -0.9
CLIP4-204ENST00000404424 CSNK1A1P48729 337 aa9.43□□□□□ -0.9
CLIP4-204ENST00000404424 H3F3AP84243 136 aa9.43□□□□□ -0.9
CLIP4-204ENST00000404424 GUCA2BQ16661 112 aa9.43□□□□□ -0.9
CLIP4-204ENST00000404424 MST1LQ2TV78 715 aa9.43□□□□□ -0.9
CLIP4-204ENST00000404424 HFEQ30201 348 aa9.43□□□□□ -0.9
CLIP4-204ENST00000404424 H3F3CQ6NXT2 135 aa9.43□□□□□ -0.9
CLIP4-204ENST00000404424 FOXL2NBQ6ZUU3 175 aa9.43□□□□□ -0.9
CLIP4-204ENST00000404424 C1QL2Q7Z5L3 287 aa9.43□□□□□ -0.9
CLIP4-204ENST00000404424 TMEM54Q969K7 222 aa9.43□□□□□ -0.9
CLIP4-204ENST00000404424 TREM1Q9NP99 234 aa9.43□□□□□ -0.9
CLIP4-204ENST00000404424 PCDHGA1Q9Y5H4 931 aa9.43□□□□□ -0.9
CLIP4-204ENST00000404424 KLF2Q9Y5W3 355 aaPredicted RBP9.43□□□□□ -0.9
CLIP4-204ENST00000404424 ABCA7Q8IZY2 2146 aa9.42□□□□□ -0.9
CLIP4-204ENST00000404424 E9PLN8 166 aa9.42□□□□□ -0.9
CLIP4-204ENST00000404424 EIF1BO60739 113 aaKnown RBP9.42□□□□□ -0.9
CLIP4-204ENST00000404424 SERPINA2P20848 420 aa9.42□□□□□ -0.9
CLIP4-204ENST00000404424 OTX1P32242 354 aaPredicted RBP9.42□□□□□ -0.9
CLIP4-204ENST00000404424 RBMXP38159 391 aaKnown RBP9.42□□□□□ -0.9
CLIP4-204ENST00000404424 CAV2P51636 162 aa9.42□□□□□ -0.9
CLIP4-204ENST00000404424 UBE2V2Q15819 145 aa9.42□□□□□ -0.9
CLIP4-204ENST00000404424 RAB11FIP2Q7L804 512 aa9.42□□□□□ -0.9
CLIP4-204ENST00000404424 EDARQ9UNE0 448 aa9.42□□□□□ -0.9
CLIP4-204ENST00000404424 CHCHD2Q9Y6H1 151 aaPredicted RBP9.42□□□□□ -0.9
CLIP4-204ENST00000404424 CEP192Q8TEP8 1941 aa9.42□□□□□ -0.9
CLIP4-204ENST00000404424 F5H5K5 113 aa9.42□□□□□ -0.9
CLIP4-204ENST00000404424 HOXB5P09067 269 aa9.42□□□□□ -0.9
CLIP4-204ENST00000404424 FCGR2AP12318 317 aa9.42□□□□□ -0.9
CLIP4-204ENST00000404424 PVALBP20472 110 aaPredicted RBP9.42□□□□□ -0.9
CLIP4-204ENST00000404424 HIST1H3AP68431 136 aa9.42□□□□□ -0.9
CLIP4-204ENST00000404424 ENDOGQ14249 297 aaKnown RBP9.42□□□□□ -0.9
CLIP4-204ENST00000404424 HIST2H3PS2Q5TEC6 136 aa9.42□□□□□ -0.9
CLIP4-204ENST00000404424 HIST2H3AQ71DI3 136 aa9.42□□□□□ -0.9
CLIP4-204ENST00000404424 LINC00518Q8N0U6 118 aa9.42□□□□□ -0.9
CLIP4-204ENST00000404424 OR5D18Q8NGL1 313 aa9.42□□□□□ -0.9
CLIP4-204ENST00000404424 MICU1Q9BPX6 476 aa9.42□□□□□ -0.9
CLIP4-204ENST00000404424 DUSP23Q9BVJ7 150 aa9.42□□□□□ -0.9
CLIP4-204ENST00000404424 CNTNAP3Q9BZ76 1288 aa9.42□□□□□ -0.9
CLIP4-204ENST00000404424 TLNRD1Q9H1K6 362 aa9.42□□□□□ -0.9
CLIP4-204ENST00000404424 RHOFQ9HBH0 211 aa9.42□□□□□ -0.9
CLIP4-204ENST00000404424 TAF9BQ9HBM6 251 aa9.42□□□□□ -0.9
CLIP4-204ENST00000404424 OR2S2Q9NQN1 319 aa9.42□□□□□ -0.9
CLIP4-204ENST00000404424 PRR13Q9NZ81 148 aa9.42□□□□□ -0.9
CLIP4-204ENST00000404424 GSKIPQ9P0R6 139 aa9.42□□□□□ -0.9
CLIP4-204ENST00000404424 CTSDP07339 412 aaPredicted RBP9.41□□□□□ -0.9
CLIP4-204ENST00000404424 S100A10P60903 97 aa9.41□□□□□ -0.9
CLIP4-204ENST00000404424 SRSF3P84103 164 aaKnown RBP9.41□□□□□ -0.9
CLIP4-204ENST00000404424 SGPP2Q8IWX5 399 aa9.41□□□□□ -0.9
CLIP4-204ENST00000404424 BHLHE23Q8NDY6 225 aa9.41□□□□□ -0.9
CLIP4-204ENST00000404424 OR51F2Q8NH61 342 aa9.41□□□□□ -0.9
CLIP4-204ENST00000404424 INTS12Q96CB8 462 aaKnown RBP9.41□□□□□ -0.9
CLIP4-204ENST00000404424 LIN37Q96GY3 246 aaPredicted RBP9.41□□□□□ -0.9
CLIP4-204ENST00000404424 DECR2Q9NUI1 292 aa9.41□□□□□ -0.9
CLIP4-204ENST00000404424 MLXQ9UH92 298 aa9.41□□□□□ -0.9
CLIP4-204ENST00000404424 PIGLQ9Y2B2 252 aa9.41□□□□□ -0.9
CLIP4-204ENST00000404424 PMS2P1A4D2B8 440 aa9.41□□□□□ -0.9
CLIP4-204ENST00000404424 DHRS7CA6NNS2 312 aa9.41□□□□□ -0.9
CLIP4-204ENST00000404424 CST4P01036 141 aa9.41□□□□□ -0.9
CLIP4-204ENST00000404424 KNG1P01042 644 aa9.41□□□□□ -0.9
CLIP4-204ENST00000404424 GAPDHP04406 335 aaKnown RBP9.41□□□□□ -0.9
CLIP4-204ENST00000404424 HEXAP06865 529 aa9.41□□□□□ -0.9
CLIP4-204ENST00000404424 HKR1P10072 659 aa9.41□□□□□ -0.9
CLIP4-204ENST00000404424 FAHP16930 419 aa9.41□□□□□ -0.9
CLIP4-204ENST00000404424 PTGER4P35408 488 aa9.41□□□□□ -0.9
CLIP4-204ENST00000404424 SULT1A2P50226 295 aa9.41□□□□□ -0.9
CLIP4-204ENST00000404424 RBM39Q14498 530 aaKnown RBP9.41□□□□□ -0.9
CLIP4-204ENST00000404424 SMCO1Q147U7 214 aa9.41□□□□□ -0.9
CLIP4-204ENST00000404424 SHBQ15464 509 aa9.41□□□□□ -0.9
CLIP4-204ENST00000404424 TMEM88Q6PEY1 159 aa9.41□□□□□ -0.9
CLIP4-204ENST00000404424 PPP1R3BQ86XI6 285 aa9.41□□□□□ -0.9
CLIP4-204ENST00000404424 SULF2Q8IWU5 870 aa9.41□□□□□ -0.9
CLIP4-204ENST00000404424 SEMA6DQ8NFY4 1073 aa9.41□□□□□ -0.9
CLIP4-204ENST00000404424 NPRL2Q8WTW4 380 aa9.41□□□□□ -0.9
CLIP4-204ENST00000404424 NABP1Q96AH0 204 aa9.41□□□□□ -0.9
CLIP4-204ENST00000404424 CPNE2Q96FN4 548 aaPredicted RBP9.41□□□□□ -0.9
CLIP4-204ENST00000404424 SHDQ96IW2 340 aa9.41□□□□□ -0.9
CLIP4-204ENST00000404424 NRIP2Q9BQI9 281 aa9.41□□□□□ -0.9
CLIP4-204ENST00000404424 NAA11Q9BSU3 229 aaPredicted RBP9.41□□□□□ -0.9
CLIP4-204ENST00000404424 ZNF701Q9NV72 531 aaPredicted RBP9.41□□□□□ -0.9
CLIP4-204ENST00000404424 PLEKHJ1Q9NW61 149 aa9.41□□□□□ -0.9
CLIP4-204ENST00000404424 POMT1Q9Y6A1 747 aa9.41□□□□□ -0.9
CLIP4-204ENST00000404424 IGHV5-10-1A0A0J9YXX1 117 aa9.4□□□□□ -0.9
CLIP4-204ENST00000404424 M0R135 149 aa9.4□□□□□ -0.9
CLIP4-204ENST00000404424 DHHO43323 396 aa9.4□□□□□ -0.9
CLIP4-204ENST00000404424 JTBO76095 146 aa9.4□□□□□ -0.9
CLIP4-204ENST00000404424 IFNA21P01568 189 aa9.4□□□□□ -0.9
CLIP4-204ENST00000404424 SERPINA5P05154 406 aa9.4□□□□□ -0.9
CLIP4-204ENST00000404424 SFTPBP07988 381 aa9.4□□□□□ -0.9
CLIP4-204ENST00000404424 PRKACAP17612 351 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms