RNA–Protein interactions for RNA: ENST00000403495.2

HMGB1P17-201, Transcript of high mobility group box 1 pseudogene 17, humanhuman

BASIC

Gene HMGB1P17, Length 628 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P17-201ENST00000403495 MT-ND4P03905 459 aa2.24□□□□□ -2.05
HMGB1P17-201ENST00000403495 RHOCP08134 193 aa2.24□□□□□ -2.05
HMGB1P17-201ENST00000403495 GFAPP14136 432 aa2.24□□□□□ -2.05
HMGB1P17-201ENST00000403495 BGNP21810 368 aa2.24□□□□□ -2.05
HMGB1P17-201ENST00000403495 ARL2P36404 184 aa2.24□□□□□ -2.05
HMGB1P17-201ENST00000403495 PMELP40967 661 aa2.24□□□□□ -2.05
HMGB1P17-201ENST00000403495 EIF1P41567 113 aaKnown RBP2.24□□□□□ -2.05
HMGB1P17-201ENST00000403495 GALR1P47211 349 aa2.24□□□□□ -2.05
HMGB1P17-201ENST00000403495 KCNJ3P48549 501 aa2.24□□□□□ -2.05
HMGB1P17-201ENST00000403495 SLC35B1P78383 322 aa2.24□□□□□ -2.05
HMGB1P17-201ENST00000403495 IFFO1Q0D2I5 559 aa2.24□□□□□ -2.05
HMGB1P17-201ENST00000403495 STX3Q13277 289 aa2.24□□□□□ -2.05
HMGB1P17-201ENST00000403495 C16orf72Q14CZ0 275 aa2.24□□□□□ -2.05
HMGB1P17-201ENST00000403495 PRSS8Q16651 343 aa2.24□□□□□ -2.05
HMGB1P17-201ENST00000403495 COX19Q49B96 90 aa2.24□□□□□ -2.05
HMGB1P17-201ENST00000403495 TEX30Q5JUR7 227 aa2.24□□□□□ -2.05
HMGB1P17-201ENST00000403495 KHDRBS2Q5VWX1 349 aaKnown RBP2.24□□□□□ -2.05
HMGB1P17-201ENST00000403495 DUPD1Q68J44 220 aa2.24□□□□□ -2.05
HMGB1P17-201ENST00000403495 Q6ZSR6 202 aa2.24□□□□□ -2.05
HMGB1P17-201ENST00000403495 SPATA24Q86W54 205 aa2.24□□□□□ -2.05
HMGB1P17-201ENST00000403495 LRRC8AQ8IWT6 810 aa2.24□□□□□ -2.05
HMGB1P17-201ENST00000403495 SYS1Q8N2H4 156 aa2.24□□□□□ -2.05
HMGB1P17-201ENST00000403495 OSR2Q8N2R0 312 aa2.24□□□□□ -2.05
HMGB1P17-201ENST00000403495 ZNF615Q8N8J6 731 aa2.24□□□□□ -2.05
HMGB1P17-201ENST00000403495 CYB561A3Q8NBI2 242 aa2.24□□□□□ -2.05
HMGB1P17-201ENST00000403495 OR6N2Q8NGY6 317 aa2.24□□□□□ -2.05
HMGB1P17-201ENST00000403495 OR13G1Q8NGZ3 307 aa2.24□□□□□ -2.05
HMGB1P17-201ENST00000403495 CLHC1Q8NHS4 586 aa2.24□□□□□ -2.05
HMGB1P17-201ENST00000403495 ANGPTL6Q8NI99 470 aa2.24□□□□□ -2.05
HMGB1P17-201ENST00000403495 CCDC12Q8WUD4 166 aaPredicted RBP2.24□□□□□ -2.05
HMGB1P17-201ENST00000403495 PDCD6IPQ8WUM4 868 aaKnown RBP2.24□□□□□ -2.05
HMGB1P17-201ENST00000403495 DCAKDQ8WVC6 231 aa2.24□□□□□ -2.05
HMGB1P17-201ENST00000403495 TMEM234Q8WY98 164 aa2.24□□□□□ -2.05
HMGB1P17-201ENST00000403495 ING5Q8WYH8 240 aa2.24□□□□□ -2.05
HMGB1P17-201ENST00000403495 CDKL2Q92772 493 aa2.24□□□□□ -2.05
HMGB1P17-201ENST00000403495 SLC25A46Q96AG3 418 aa2.24□□□□□ -2.05
HMGB1P17-201ENST00000403495 TRNT1Q96Q11 434 aaKnown RBP2.24□□□□□ -2.05
HMGB1P17-201ENST00000403495 ACBD6Q9BR61 282 aa2.24□□□□□ -2.05
HMGB1P17-201ENST00000403495 UTP23Q9BRU9 249 aaKnown RBP2.24□□□□□ -2.05
HMGB1P17-201ENST00000403495 MARVELD1Q9BSK0 173 aa2.24□□□□□ -2.05
HMGB1P17-201ENST00000403495 FRMD8P1Q9BZ68 369 aaPredicted RBP2.24□□□□□ -2.05
HMGB1P17-201ENST00000403495 PORCNQ9H237 461 aa2.24□□□□□ -2.05
HMGB1P17-201ENST00000403495 SYT4Q9H2B2 425 aa2.24□□□□□ -2.05
HMGB1P17-201ENST00000403495 C1orf198Q9H425 327 aa2.24□□□□□ -2.05
HMGB1P17-201ENST00000403495 GOLPH3Q9H4A6 298 aa2.24□□□□□ -2.05
HMGB1P17-201ENST00000403495 C21orf62Q9NYP8 219 aa2.24□□□□□ -2.05
HMGB1P17-201ENST00000403495 GGA2Q9UJY4 613 aa2.24□□□□□ -2.05
HMGB1P17-201ENST00000403495 NOSIPQ9Y314 301 aaKnown RBP2.24□□□□□ -2.05
HMGB1P17-201ENST00000403495 SIGLEC9Q9Y336 463 aa2.24□□□□□ -2.05
HMGB1P17-201ENST00000403495 PPIL1Q9Y3C6 166 aa2.24□□□□□ -2.05
HMGB1P17-201ENST00000403495 KLF12Q9Y4X4 402 aa2.24□□□□□ -2.05
HMGB1P17-201ENST00000403495 LRRC42Q9Y546 428 aa2.24□□□□□ -2.05
HMGB1P17-201ENST00000403495 SBNO1A3KN83 1393 aa2.23□□□□□ -2.05
HMGB1P17-201ENST00000403495 JCADQ9P266 1359 aa2.23□□□□□ -2.05
HMGB1P17-201ENST00000403495 ANKRD12Q6UB98 2062 aa2.23□□□□□ -2.05
HMGB1P17-201ENST00000403495 IGHV3-49A0A0A0MS15 119 aa2.23□□□□□ -2.05
HMGB1P17-201ENST00000403495 CCL15-CCL14A0A0B4J2E2 113 aa2.23□□□□□ -2.05
HMGB1P17-201ENST00000403495 TVP23AA6NH52 213 aa2.23□□□□□ -2.05
HMGB1P17-201ENST00000403495 MANBAO00462 879 aa2.23□□□□□ -2.05
HMGB1P17-201ENST00000403495 PRMT5O14744 637 aaPredicted RBP2.23□□□□□ -2.05
HMGB1P17-201ENST00000403495 SC5DO75845 299 aa2.23□□□□□ -2.05
HMGB1P17-201ENST00000403495 IL12BP29460 328 aa2.23□□□□□ -2.05
HMGB1P17-201ENST00000403495 APLNRP35414 380 aa2.23□□□□□ -2.05
HMGB1P17-201ENST00000403495 ARR3P36575 388 aa2.23□□□□□ -2.05
HMGB1P17-201ENST00000403495 ANP32AP39687 249 aaKnown RBP2.23□□□□□ -2.05
HMGB1P17-201ENST00000403495 HCCSP53701 268 aa2.23□□□□□ -2.05
HMGB1P17-201ENST00000403495 MAP3K7CLP57077 242 aa2.23□□□□□ -2.05
HMGB1P17-201ENST00000403495 IFITM3Q01628 133 aa2.23□□□□□ -2.05
HMGB1P17-201ENST00000403495 RPL18AQ02543 176 aaKnown RBP2.23□□□□□ -2.05
HMGB1P17-201ENST00000403495 INCA1Q0VD86 236 aa2.23□□□□□ -2.05
HMGB1P17-201ENST00000403495 LY6EQ16553 131 aa2.23□□□□□ -2.05
HMGB1P17-201ENST00000403495 PSG3Q16557 428 aa2.23□□□□□ -2.05
HMGB1P17-201ENST00000403495 CCL15Q16663 113 aa2.23□□□□□ -2.05
HMGB1P17-201ENST00000403495 AP1ARQ63HQ0 302 aa2.23□□□□□ -2.05
HMGB1P17-201ENST00000403495 STEAP4Q687X5 459 aa2.23□□□□□ -2.05
HMGB1P17-201ENST00000403495 DAW1Q8N136 415 aa2.23□□□□□ -2.05
HMGB1P17-201ENST00000403495 OR51A7Q8NH64 312 aa2.23□□□□□ -2.05
HMGB1P17-201ENST00000403495 LGALS14Q8TCE9 139 aa2.23□□□□□ -2.05
HMGB1P17-201ENST00000403495 S100PBPQ96BU1 408 aa2.23□□□□□ -2.05
HMGB1P17-201ENST00000403495 Q96MT0 163 aa2.23□□□□□ -2.05
HMGB1P17-201ENST00000403495 RDH12Q96NR8 316 aa2.23□□□□□ -2.05
HMGB1P17-201ENST00000403495 TEAD3Q99594 435 aa2.23□□□□□ -2.05
HMGB1P17-201ENST00000403495 SPIN2AQ99865 258 aa2.23□□□□□ -2.05
HMGB1P17-201ENST00000403495 SPIN2BQ9BPZ2 258 aa2.23□□□□□ -2.05
HMGB1P17-201ENST00000403495 ULBP2Q9BZM5 246 aa2.23□□□□□ -2.05
HMGB1P17-201ENST00000403495 OR52A5Q9H2C5 316 aa2.23□□□□□ -2.05
HMGB1P17-201ENST00000403495 RHBDL2Q9NX52 303 aa2.23□□□□□ -2.05
HMGB1P17-201ENST00000403495 ENOPH1Q9UHY7 261 aa2.23□□□□□ -2.05
HMGB1P17-201ENST00000403495 VAX2Q9UIW0 290 aa2.23□□□□□ -2.05
HMGB1P17-201ENST00000403495 PLA2R1Q13018 1463 aa2.22□□□□□ -2.05
HMGB1P17-201ENST00000403495 MGAT4DA6NG13 374 aa2.22□□□□□ -2.05
HMGB1P17-201ENST00000403495 ZNF850A8MQ14 1090 aa2.22□□□□□ -2.05
HMGB1P17-201ENST00000403495 SEC14L6B5MCN3 397 aa2.22□□□□□ -2.05
HMGB1P17-201ENST00000403495 RTL8CO15255 209 aa2.22□□□□□ -2.05
HMGB1P17-201ENST00000403495 ZMPSTE24O75844 475 aa2.22□□□□□ -2.05
HMGB1P17-201ENST00000403495 TRAPPC6AO75865 159 aa2.22□□□□□ -2.05
HMGB1P17-201ENST00000403495 CST4P01036 141 aa2.22□□□□□ -2.05
HMGB1P17-201ENST00000403495 PTHP01270 115 aa2.22□□□□□ -2.05
HMGB1P17-201ENST00000403495 RPN2P04844 631 aa2.22□□□□□ -2.05
HMGB1P17-201ENST00000403495 CD28P10747 220 aa2.22□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms