RNA–Protein interactions for RNA: ENST00000399916.5

RUNX3-203, Transcript of runt related transcription factor 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene RUNX3, Length 4,340 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX3-203ENST00000399916 DUSP5Q16690 384 aa12.31□□□□□ -0.44
RUNX3-203ENST00000399916 OR5D14Q8NGL3 314 aa12.31□□□□□ -0.44
RUNX3-203ENST00000399916 OR1L6Q8NGR2 347 aa12.31□□□□□ -0.44
RUNX3-203ENST00000399916 ADAMTS18Q8TE60 1221 aa12.31□□□□□ -0.44
RUNX3-203ENST00000399916 SLC35A4Q96G79 324 aa12.31□□□□□ -0.44
RUNX3-203ENST00000399916 CPEB1Q9BZB8 566 aaKnown RBP12.31□□□□□ -0.44
RUNX3-203ENST00000399916 WWTR1Q9GZV5 400 aa12.31□□□□□ -0.44
RUNX3-203ENST00000399916 LPAR5Q9H1C0 372 aa12.31□□□□□ -0.44
RUNX3-203ENST00000399916 DSPPQ9NZW4 1301 aa12.31□□□□□ -0.44
RUNX3-203ENST00000399916 MDFIC2A0A1B0GVS7 189 aa12.31□□□□□ -0.44
RUNX3-203ENST00000399916 LRP5LA4QPB2 252 aa12.31□□□□□ -0.44
RUNX3-203ENST00000399916 NPIPB8E9PQR5 432 aa12.31□□□□□ -0.44
RUNX3-203ENST00000399916 HIST1H1TP22492 207 aaPredicted RBP12.31□□□□□ -0.44
RUNX3-203ENST00000399916 ZNF93P35789 620 aaPredicted RBP12.31□□□□□ -0.44
RUNX3-203ENST00000399916 ZNF90Q03938 601 aa12.31□□□□□ -0.44
RUNX3-203ENST00000399916 ZNF805Q5CZA5 627 aa12.31□□□□□ -0.44
RUNX3-203ENST00000399916 FAM78BQ5VT40 261 aa12.31□□□□□ -0.44
RUNX3-203ENST00000399916 SLC36A1Q7Z2H8 476 aa12.31□□□□□ -0.44
RUNX3-203ENST00000399916 DIO2Q92813 273 aa12.31□□□□□ -0.44
RUNX3-203ENST00000399916 SNHG12Q9BXW3 62 aa12.31□□□□□ -0.44
RUNX3-203ENST00000399916 KLHL13Q9P2N7 655 aa12.31□□□□□ -0.44
RUNX3-203ENST00000399916 ZMIZ1Q9ULJ6 1067 aa12.31□□□□□ -0.44
RUNX3-203ENST00000399916 HS3ST2Q9Y278 367 aa12.31□□□□□ -0.44
RUNX3-203ENST00000399916 MRPS28Q9Y2Q9 187 aaKnown RBP12.31□□□□□ -0.44
RUNX3-203ENST00000399916 STARD10Q9Y365 291 aa12.31□□□□□ -0.44
RUNX3-203ENST00000399916 BRCA2P51587 3418 aa12.31□□□□□ -0.44
RUNX3-203ENST00000399916 SLC17A2O00624 439 aa12.3□□□□□ -0.44
RUNX3-203ENST00000399916 AMTP48728 403 aa12.3□□□□□ -0.44
RUNX3-203ENST00000399916 PRPS1P60891 318 aa12.3□□□□□ -0.44
RUNX3-203ENST00000399916 LDLRAD2Q5SZI1 272 aa12.3□□□□□ -0.44
RUNX3-203ENST00000399916 ATOH7Q8N100 152 aa12.3□□□□□ -0.44
RUNX3-203ENST00000399916 EXD3Q8N9H8 876 aa12.3□□□□□ -0.44
RUNX3-203ENST00000399916 NUDT11Q96G61 164 aa12.3□□□□□ -0.44
RUNX3-203ENST00000399916 TOX2Q96NM4 488 aa12.3□□□□□ -0.44
RUNX3-203ENST00000399916 PLEKHA2Q9HB19 425 aa12.3□□□□□ -0.44
RUNX3-203ENST00000399916 GCGP01275 180 aa12.3□□□□□ -0.44
RUNX3-203ENST00000399916 NKX2-1P43699 371 aaPredicted RBP12.3□□□□□ -0.44
RUNX3-203ENST00000399916 RAB30Q15771 203 aa12.3□□□□□ -0.44
RUNX3-203ENST00000399916 ZNF765Q7L2R6 523 aa12.3□□□□□ -0.44
RUNX3-203ENST00000399916 TBL1XR1Q9BZK7 514 aa12.3□□□□□ -0.44
RUNX3-203ENST00000399916 NKX2-4Q9H2Z4 354 aa12.3□□□□□ -0.44
RUNX3-203ENST00000399916 WDR76Q9H967 626 aa12.3□□□□□ -0.44
RUNX3-203ENST00000399916 PRAMEF27A3QJZ7 478 aa12.3□□□□□ -0.44
RUNX3-203ENST00000399916 ABLIM3O94929 683 aa12.3□□□□□ -0.44
RUNX3-203ENST00000399916 BCKDHBP21953 392 aa12.3□□□□□ -0.44
RUNX3-203ENST00000399916 RPS4XP62701 263 aaKnown RBP12.3□□□□□ -0.44
RUNX3-203ENST00000399916 SLC7A9P82251 487 aa12.3□□□□□ -0.44
RUNX3-203ENST00000399916 ELAVL3Q14576 367 aaKnown RBP12.3□□□□□ -0.44
RUNX3-203ENST00000399916 TSPO2Q5TGU0 170 aa12.3□□□□□ -0.44
RUNX3-203ENST00000399916 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.3□□□□□ -0.44
RUNX3-203ENST00000399916 TSLPQ969D9 159 aa12.3□□□□□ -0.44
RUNX3-203ENST00000399916 FAM122AQ96E09 287 aa12.3□□□□□ -0.44
RUNX3-203ENST00000399916 HSPB9Q9BQS6 159 aa12.3□□□□□ -0.44
RUNX3-203ENST00000399916 SCN3AQ9NY46 2000 aa12.3□□□□□ -0.44
RUNX3-203ENST00000399916 KIAA1324LA8MWY0 1029 aaPredicted RBP12.3□□□□□ -0.44
RUNX3-203ENST00000399916 SLC31A1O15431 190 aa12.3□□□□□ -0.44
RUNX3-203ENST00000399916 PPP2CBP62714 309 aa12.3□□□□□ -0.44
RUNX3-203ENST00000399916 PPP2CAP67775 309 aa12.3□□□□□ -0.44
RUNX3-203ENST00000399916 ARL6IP1Q15041 203 aa12.3□□□□□ -0.44
RUNX3-203ENST00000399916 OR8G2PQ6IF36 304 aa12.3□□□□□ -0.44
RUNX3-203ENST00000399916 HIST3H2BBQ8N257 126 aa12.3□□□□□ -0.44
RUNX3-203ENST00000399916 PRR18Q8N4B5 295 aa12.3□□□□□ -0.44
RUNX3-203ENST00000399916 OR1E3Q8WZA6 343 aa12.3□□□□□ -0.44
RUNX3-203ENST00000399916 PCGF1Q9BSM1 259 aa12.3□□□□□ -0.44
RUNX3-203ENST00000399916 SEMA5BQ9P283 1151 aa12.3□□□□□ -0.44
RUNX3-203ENST00000399916 PPIAL4AQ9Y536 164 aa12.3□□□□□ -0.44
RUNX3-203ENST00000399916 TIMP1P01033 207 aa12.29□□□□□ -0.44
RUNX3-203ENST00000399916 OPN1MWP04001 364 aa12.29□□□□□ -0.44
RUNX3-203ENST00000399916 ZNF728P0DKX0 622 aa12.29□□□□□ -0.44
RUNX3-203ENST00000399916 OPN1MW2P0DN77 364 aa12.29□□□□□ -0.44
RUNX3-203ENST00000399916 OPN1MW3P0DN78 364 aa12.29□□□□□ -0.44
RUNX3-203ENST00000399916 FZD2Q14332 565 aa12.29□□□□□ -0.44
RUNX3-203ENST00000399916 RTN4IP1Q8WWV3 396 aaPredicted RBP12.29□□□□□ -0.44
RUNX3-203ENST00000399916 FGF13Q92913 245 aa12.29□□□□□ -0.44
RUNX3-203ENST00000399916 SLC46A2Q9BY10 475 aa12.29□□□□□ -0.44
RUNX3-203ENST00000399916 OR2J1Q9GZK6 312 aa12.29□□□□□ -0.44
RUNX3-203ENST00000399916 SEBOXQ9HB31 216 aaPredicted RBP12.29□□□□□ -0.44
RUNX3-203ENST00000399916 HCFC1R1Q9NWW0 138 aa12.29□□□□□ -0.44
RUNX3-203ENST00000399916 A0A0G2JK05 382 aa12.29□□□□□ -0.44
RUNX3-203ENST00000399916 OR4A8P0C604 315 aa12.29□□□□□ -0.44
RUNX3-203ENST00000399916 PSMB3P49720 205 aa12.29□□□□□ -0.44
RUNX3-203ENST00000399916 TGFBR3Q03167 851 aa12.29□□□□□ -0.44
RUNX3-203ENST00000399916 HTR3DQ70Z44 454 aa12.29□□□□□ -0.44
RUNX3-203ENST00000399916 KLHDC1Q8N7A1 406 aa12.29□□□□□ -0.44
RUNX3-203ENST00000399916 DCBLD2Q96PD2 775 aa12.29□□□□□ -0.44
RUNX3-203ENST00000399916 SPIN2AQ99865 258 aa12.29□□□□□ -0.44
RUNX3-203ENST00000399916 SPIN2BQ9BPZ2 258 aa12.29□□□□□ -0.44
RUNX3-203ENST00000399916 LYRM2Q9NU23 88 aaPredicted RBP12.29□□□□□ -0.44
RUNX3-203ENST00000399916 KCNS2Q9ULS6 477 aa12.29□□□□□ -0.44
RUNX3-203ENST00000399916 LNP1A1A4G5 178 aa12.29□□□□□ -0.44
RUNX3-203ENST00000399916 SERTM1A2A2V5 107 aa12.29□□□□□ -0.44
RUNX3-203ENST00000399916 OPN1LWP04000 364 aa12.29□□□□□ -0.44
RUNX3-203ENST00000399916 SOD2P04179 222 aa12.29□□□□□ -0.44
RUNX3-203ENST00000399916 OR5H8P0DN80 308 aa12.29□□□□□ -0.44
RUNX3-203ENST00000399916 CCKARP32238 428 aa12.29□□□□□ -0.44
RUNX3-203ENST00000399916 NANOS3P60323 173 aaKnown RBP12.29□□□□□ -0.44
RUNX3-203ENST00000399916 UBE2G2P60604 165 aa12.29□□□□□ -0.44
RUNX3-203ENST00000399916 SLC25A42Q86VD7 318 aa12.29□□□□□ -0.44
RUNX3-203ENST00000399916 IRF7Q92985 503 aa12.29□□□□□ -0.44
RUNX3-203ENST00000399916 SH3BGRL3Q9H299 93 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms