RNA–Protein interactions for RNA: ENST00000398640.6

PCDHA11-201, Transcript of protocadherin alpha 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHA11, Length 6,115 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA11-201ENST00000398640 TAAR6Q96RI8 345 aa12.75□□□□□ -0.37
PCDHA11-201ENST00000398640 JAM3Q9BX67 310 aa12.75□□□□□ -0.37
PCDHA11-201ENST00000398640 ZAR1LA6NP61 321 aa12.75□□□□□ -0.37
PCDHA11-201ENST00000398640 CCL21O00585 134 aa12.75□□□□□ -0.37
PCDHA11-201ENST00000398640 RBP4P02753 201 aa12.75□□□□□ -0.37
PCDHA11-201ENST00000398640 MT-ND4LP03901 98 aa12.75□□□□□ -0.37
PCDHA11-201ENST00000398640 POU3F3P20264 500 aaPredicted RBP12.75□□□□□ -0.37
PCDHA11-201ENST00000398640 ISL1P61371 349 aa12.75□□□□□ -0.37
PCDHA11-201ENST00000398640 MFSD4AQ8N468 514 aa12.75□□□□□ -0.37
PCDHA11-201ENST00000398640 WDR31Q8NA23 367 aa12.75□□□□□ -0.37
PCDHA11-201ENST00000398640 LILRB4Q8NHJ6 448 aa12.75□□□□□ -0.37
PCDHA11-201ENST00000398640 TMEM231Q9H6L2 316 aa12.75□□□□□ -0.37
PCDHA11-201ENST00000398640 A0A087WUJ7 227 aa12.74□□□□□ -0.37
PCDHA11-201ENST00000398640 FABP5Q01469 135 aa12.74□□□□□ -0.37
PCDHA11-201ENST00000398640 SAP25Q8TEE9 199 aa12.74□□□□□ -0.37
PCDHA11-201ENST00000398640 RPUSD4Q96CM3 377 aaKnown RBP12.74□□□□□ -0.37
PCDHA11-201ENST00000398640 FBXO8Q9NRD0 319 aa12.74□□□□□ -0.37
PCDHA11-201ENST00000398640 B9D1Q9UPM9 204 aa12.74□□□□□ -0.37
PCDHA11-201ENST00000398640 SCN10AQ9Y5Y9 1956 aa12.74□□□□□ -0.37
PCDHA11-201ENST00000398640 MGMTP16455 207 aa12.74□□□□□ -0.37
PCDHA11-201ENST00000398640 SPINK2P20155 84 aa12.74□□□□□ -0.37
PCDHA11-201ENST00000398640 PMP22Q01453 160 aa12.74□□□□□ -0.37
PCDHA11-201ENST00000398640 ZNF547Q8IVP9 402 aa12.74□□□□□ -0.37
PCDHA11-201ENST00000398640 TRIP11Q15643 1979 aa12.74□□□□□ -0.37
PCDHA11-201ENST00000398640 KCNE1BA0A087WTH5 132 aa12.74□□□□□ -0.37
PCDHA11-201ENST00000398640 C3orf80F5H4A9 247 aa12.74□□□□□ -0.37
PCDHA11-201ENST00000398640 KLK8O60259 260 aa12.74□□□□□ -0.37
PCDHA11-201ENST00000398640 CYTIPO60759 359 aa12.74□□□□□ -0.37
PCDHA11-201ENST00000398640 SMIM18P0DKX4 95 aa12.74□□□□□ -0.37
PCDHA11-201ENST00000398640 OR5H8P0DN80 308 aa12.74□□□□□ -0.37
PCDHA11-201ENST00000398640 CA6P23280 308 aa12.74□□□□□ -0.37
PCDHA11-201ENST00000398640 BPIFB3P59826 476 aa12.74□□□□□ -0.37
PCDHA11-201ENST00000398640 ZNF90Q03938 601 aa12.74□□□□□ -0.37
PCDHA11-201ENST00000398640 PRSS41Q7RTY9 318 aa12.74□□□□□ -0.37
PCDHA11-201ENST00000398640 LINC01555Q8NAE3 123 aa12.74□□□□□ -0.37
PCDHA11-201ENST00000398640 RHNO1Q9BSD3 238 aa12.74□□□□□ -0.37
PCDHA11-201ENST00000398640 PLSCR3Q9NRY6 295 aa12.74□□□□□ -0.37
PCDHA11-201ENST00000398640 NDUFB11Q9NX14 153 aa12.74□□□□□ -0.37
PCDHA11-201ENST00000398640 PLEKHB1Q9UF11 243 aaPredicted RBP12.74□□□□□ -0.37
PCDHA11-201ENST00000398640 TUBAL3A6NHL2 446 aa12.74□□□□□ -0.37
PCDHA11-201ENST00000398640 CD3DP04234 171 aa12.74□□□□□ -0.37
PCDHA11-201ENST00000398640 NTF3P20783 257 aa12.74□□□□□ -0.37
PCDHA11-201ENST00000398640 OR3A4PP47883 348 aa12.74□□□□□ -0.37
PCDHA11-201ENST00000398640 CLEC12BQ2HXU8 276 aa12.74□□□□□ -0.37
PCDHA11-201ENST00000398640 OR10D3Q8NH80 312 aa12.74□□□□□ -0.37
PCDHA11-201ENST00000398640 DDA1Q9BW61 102 aa12.74□□□□□ -0.37
PCDHA11-201ENST00000398640 SLC35D1Q9NTN3 355 aa12.74□□□□□ -0.37
PCDHA11-201ENST00000398640 TCRBV5S2A0A599 114 aa12.74□□□□□ -0.37
PCDHA11-201ENST00000398640 APOBEC3DQ96AK3 386 aaPredicted RBP12.74□□□□□ -0.37
PCDHA11-201ENST00000398640 C14orf79Q96F83 325 aa12.74□□□□□ -0.37
PCDHA11-201ENST00000398640 GABARAPL1Q9H0R8 117 aa12.74□□□□□ -0.37
PCDHA11-201ENST00000398640 OR4C3Q8NH37 302 aa12.73□□□□□ -0.37
PCDHA11-201ENST00000398640 OR6S1Q8NH40 331 aa12.73□□□□□ -0.37
PCDHA11-201ENST00000398640 CMBLQ96DG6 245 aa12.73□□□□□ -0.37
PCDHA11-201ENST00000398640 LRFN3Q9BTN0 628 aa12.73□□□□□ -0.37
PCDHA11-201ENST00000398640 AUNIPQ9H7T9 357 aa12.73□□□□□ -0.37
PCDHA11-201ENST00000398640 OR6C68A6NDL8 312 aa12.73□□□□□ -0.37
PCDHA11-201ENST00000398640 LY86O95711 162 aa12.73□□□□□ -0.37
PCDHA11-201ENST00000398640 ACOT6Q3I5F7 207 aaPredicted RBP12.73□□□□□ -0.37
PCDHA11-201ENST00000398640 AVPI1Q5T686 147 aa12.73□□□□□ -0.37
PCDHA11-201ENST00000398640 GPR32P1Q8NGA4 272 aa12.73□□□□□ -0.37
PCDHA11-201ENST00000398640 SMIM19Q96E16 107 aa12.73□□□□□ -0.37
PCDHA11-201ENST00000398640 SCPEP1Q9HB40 452 aa12.73□□□□□ -0.37
PCDHA11-201ENST00000398640 FAM157AC9JC47 383 aa12.73□□□□□ -0.37
PCDHA11-201ENST00000398640 DCTN6O00399 190 aa12.73□□□□□ -0.37
PCDHA11-201ENST00000398640 GABRA1P14867 456 aa12.73□□□□□ -0.37
PCDHA11-201ENST00000398640 MESP2Q0VG99 397 aa12.73□□□□□ -0.37
PCDHA11-201ENST00000398640 BHLHA15Q7RTS1 189 aaPredicted RBP12.73□□□□□ -0.37
PCDHA11-201ENST00000398640 ADPRHL1Q8NDY3 354 aa12.73□□□□□ -0.37
PCDHA11-201ENST00000398640 AKR1E2Q96JD6 320 aa12.73□□□□□ -0.37
PCDHA11-201ENST00000398640 ACTR3CQ9C0K3 210 aaPredicted RBP12.73□□□□□ -0.37
PCDHA11-201ENST00000398640 SIPA1L1O43166 1804 aa12.73□□□□□ -0.37
PCDHA11-201ENST00000398640 CEACAM1P13688 526 aa12.73□□□□□ -0.37
PCDHA11-201ENST00000398640 BTNL8Q6UX41 500 aa12.73□□□□□ -0.37
PCDHA11-201ENST00000398640 OR1F12Q8NHA8 337 aa12.73□□□□□ -0.37
PCDHA11-201ENST00000398640 OR2T6Q8NHC8 308 aa12.73□□□□□ -0.37
PCDHA11-201ENST00000398640 DOCK3Q8IZD9 2030 aa12.73□□□□□ -0.37
PCDHA11-201ENST00000398640 KIF13BQ9NQT8 1826 aa12.73□□□□□ -0.37
PCDHA11-201ENST00000398640 DNASE2O00115 360 aaPredicted RBP12.73□□□□□ -0.37
PCDHA11-201ENST00000398640 FGF7P21781 194 aa12.73□□□□□ -0.37
PCDHA11-201ENST00000398640 CD276Q5ZPR3 534 aa12.73□□□□□ -0.37
PCDHA11-201ENST00000398640 OR52B4Q8NGK2 314 aa12.73□□□□□ -0.37
PCDHA11-201ENST00000398640 DPF1Q92782 380 aa12.73□□□□□ -0.37
PCDHA11-201ENST00000398640 RBPMSQ93062 196 aaKnown RBP12.73□□□□□ -0.37
PCDHA11-201ENST00000398640 GABARAPL3Q9BY60 117 aa12.73□□□□□ -0.37
PCDHA11-201ENST00000398640 PXDC1Q5TGL8 231 aa12.72□□□□□ -0.37
PCDHA11-201ENST00000398640 ARHGEF39Q8N4T4 335 aa12.72□□□□□ -0.37
PCDHA11-201ENST00000398640 CLDN23Q96B33 292 aa12.72□□□□□ -0.37
PCDHA11-201ENST00000398640 MISP3Q96FF7 219 aa12.72□□□□□ -0.37
PCDHA11-201ENST00000398640 GOLT1BQ9Y3E0 138 aa12.72□□□□□ -0.37
PCDHA11-201ENST00000398640 H3BP45 60 aa12.72□□□□□ -0.37
PCDHA11-201ENST00000398640 COX6B1P14854 86 aa12.72□□□□□ -0.37
PCDHA11-201ENST00000398640 ATF1P18846 271 aa12.72□□□□□ -0.37
PCDHA11-201ENST00000398640 FUT6P51993 359 aa12.72□□□□□ -0.37
PCDHA11-201ENST00000398640 TM4SF19Q96DZ7 209 aa12.72□□□□□ -0.37
PCDHA11-201ENST00000398640 OR2A5Q96R48 311 aa12.72□□□□□ -0.37
PCDHA11-201ENST00000398640 ZFP64Q9NPA5 681 aa12.72□□□□□ -0.37
PCDHA11-201ENST00000398640 KLF3P57682 345 aaPredicted RBP12.72□□□□□ -0.37
PCDHA11-201ENST00000398640 CDK5R1Q15078 307 aa12.72□□□□□ -0.37
PCDHA11-201ENST00000398640 SLC22A18ASQ8N1D0 253 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms