RNA–Protein interactions for RNA: ENST00000397728.7

LSS-202, Transcript of lanosterol synthase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSS, Length 4,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSS-202ENST00000397728 PRAMEF5Q5TYX0 476 aa13.59□□□□□ -0.23
LSS-202ENST00000397728 PRAMEF6Q5VXH4 476 aa13.59□□□□□ -0.23
LSS-202ENST00000397728 SHEQ5VZ18 495 aa13.59□□□□□ -0.23
LSS-202ENST00000397728 SUMF1Q8NBK3 374 aa13.59□□□□□ -0.23
LSS-202ENST00000397728 CD300LFQ8TDQ1 290 aa13.59□□□□□ -0.23
LSS-202ENST00000397728 GIMAP1Q8WWP7 306 aa13.59□□□□□ -0.23
LSS-202ENST00000397728 SHARPINQ9H0F6 387 aa13.59□□□□□ -0.23
LSS-202ENST00000397728 FLVCR1Q9Y5Y0 555 aa13.59□□□□□ -0.23
LSS-202ENST00000397728 IFNA2P01563 188 aa13.59□□□□□ -0.23
LSS-202ENST00000397728 FUT3P21217 361 aa13.59□□□□□ -0.23
LSS-202ENST00000397728 CCR6P51684 374 aa13.59□□□□□ -0.23
LSS-202ENST00000397728 DEFA5Q01523 94 aa13.59□□□□□ -0.23
LSS-202ENST00000397728 HNF4GQ14541 408 aa13.59□□□□□ -0.23
LSS-202ENST00000397728 PDLIM3Q53GG5 364 aaPredicted RBP13.59□□□□□ -0.23
LSS-202ENST00000397728 OR8B12Q8NGG6 310 aa13.59□□□□□ -0.23
LSS-202ENST00000397728 GCM1Q9NP62 436 aa13.59□□□□□ -0.23
LSS-202ENST00000397728 CCDC88CQ9P219 2028 aa13.59□□□□□ -0.23
LSS-202ENST00000397728 SLC17A2O00624 439 aa13.58□□□□□ -0.23
LSS-202ENST00000397728 MGAT2Q10469 447 aa13.58□□□□□ -0.23
LSS-202ENST00000397728 OR6K3Q8NGY3 331 aa13.58□□□□□ -0.23
LSS-202ENST00000397728 DPCDQ9BVM2 203 aaPredicted RBP13.58□□□□□ -0.23
LSS-202ENST00000397728 NXPH3O95157 252 aa13.58□□□□□ -0.24
LSS-202ENST00000397728 SMIM18P0DKX4 95 aa13.58□□□□□ -0.24
LSS-202ENST00000397728 RPS2P15880 293 aaKnown RBP13.58□□□□□ -0.24
LSS-202ENST00000397728 ADAM5Q6NVV9 412 aa13.58□□□□□ -0.24
LSS-202ENST00000397728 C20orf196Q8IYI0 205 aa13.58□□□□□ -0.24
LSS-202ENST00000397728 SLC25A40Q8TBP6 338 aa13.58□□□□□ -0.24
LSS-202ENST00000397728 SEH1LQ96EE3 360 aa13.58□□□□□ -0.24
LSS-202ENST00000397728 MFFQ9GZY8 342 aa13.58□□□□□ -0.24
LSS-202ENST00000397728 SCPEP1Q9HB40 452 aa13.58□□□□□ -0.24
LSS-202ENST00000397728 MSL2Q9HCI7 577 aa13.58□□□□□ -0.24
LSS-202ENST00000397728 PPP1R14DQ9NXH3 145 aa13.58□□□□□ -0.24
LSS-202ENST00000397728 KCNE5Q9UJ90 142 aa13.58□□□□□ -0.24
LSS-202ENST00000397728 UMODP07911 640 aa13.58□□□□□ -0.24
LSS-202ENST00000397728 CSRP3P50461 194 aa13.58□□□□□ -0.24
LSS-202ENST00000397728 C8orf82Q6P1X6 216 aaPredicted RBP13.58□□□□□ -0.24
LSS-202ENST00000397728 OR10R2Q8NGX6 335 aa13.58□□□□□ -0.24
LSS-202ENST00000397728 MEIOCA2RUB1 952 aa13.58□□□□□ -0.24
LSS-202ENST00000397728 GABARAPH6UMI1 98 aa13.58□□□□□ -0.24
LSS-202ENST00000397728 RFPL3SP0C7P2 107 aa13.58□□□□□ -0.24
LSS-202ENST00000397728 RPS16P62249 146 aaKnown RBP13.58□□□□□ -0.24
LSS-202ENST00000397728 SLC25A35Q3KQZ1 300 aa13.58□□□□□ -0.24
LSS-202ENST00000397728 EDARADDQ8WWZ3 215 aa13.58□□□□□ -0.24
LSS-202ENST00000397728 CXXC4Q9H2H0 198 aa13.58□□□□□ -0.24
LSS-202ENST00000397728 ATPIF1Q9UII2 106 aa13.58□□□□□ -0.24
LSS-202ENST00000397728 FOXJ3Q9UPW0 622 aa13.58□□□□□ -0.24
LSS-202ENST00000397728 MPC1Q9Y5U8 109 aa13.58□□□□□ -0.24
LSS-202ENST00000397728 A3GALT2U3KPV4 340 aa13.58□□□□□ -0.24
LSS-202ENST00000397728 ACSM4P0C7M7 580 aa13.57□□□□□ -0.24
LSS-202ENST00000397728 EPXP11678 715 aa13.57□□□□□ -0.24
LSS-202ENST00000397728 CCR9P51686 369 aa13.57□□□□□ -0.24
LSS-202ENST00000397728 RTP5Q14D33 572 aa13.57□□□□□ -0.24
LSS-202ENST00000397728 OR52W1Q6IF63 320 aa13.57□□□□□ -0.24
LSS-202ENST00000397728 H2BFWTQ7Z2G1 175 aa13.57□□□□□ -0.24
LSS-202ENST00000397728 SLC35G3Q8N808 338 aa13.57□□□□□ -0.24
LSS-202ENST00000397728 GALMQ96C23 342 aa13.57□□□□□ -0.24
LSS-202ENST00000397728 GPA33Q99795 319 aa13.57□□□□□ -0.24
LSS-202ENST00000397728 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.57□□□□□ -0.24
LSS-202ENST00000397728 IGKV3D-11A0A0A0MRZ8 115 aa13.57□□□□□ -0.24
LSS-202ENST00000397728 OR5B21A6NL26 309 aa13.57□□□□□ -0.24
LSS-202ENST00000397728 NGFP01138 241 aa13.57□□□□□ -0.24
LSS-202ENST00000397728 OR5H8P0DN80 308 aa13.57□□□□□ -0.24
LSS-202ENST00000397728 FCGR2CP31995 323 aa13.57□□□□□ -0.24
LSS-202ENST00000397728 EIF5A2Q9GZV4 153 aaKnown RBP13.57□□□□□ -0.24
LSS-202ENST00000397728 SLC25A31Q9H0C2 315 aa13.57□□□□□ -0.24
LSS-202ENST00000397728 RBFOX1Q9NWB1 397 aaKnown RBP13.57□□□□□ -0.24
LSS-202ENST00000397728 MLXQ9UH92 298 aa13.57□□□□□ -0.24
LSS-202ENST00000397728 PRSS50Q9UI38 385 aa13.57□□□□□ -0.24
LSS-202ENST00000397728 MRM2Q9UI43 246 aaKnown RBP13.57□□□□□ -0.24
LSS-202ENST00000397728 FBXO7Q9Y3I1 522 aa13.57□□□□□ -0.24
LSS-202ENST00000397728 TMEM30CPA0ZSE6 113 aa13.57□□□□□ -0.24
LSS-202ENST00000397728 IFNA1P01562 189 aa13.57□□□□□ -0.24
LSS-202ENST00000397728 GSK3AP49840 483 aa13.57□□□□□ -0.24
LSS-202ENST00000397728 TNFSF10P50591 281 aa13.57□□□□□ -0.24
LSS-202ENST00000397728 BCL2A1Q16548 175 aa13.57□□□□□ -0.24
LSS-202ENST00000397728 STEAP3Q658P3 488 aa13.57□□□□□ -0.24
LSS-202ENST00000397728 SLC25A21Q9BQT8 299 aaPredicted RBP13.57□□□□□ -0.24
LSS-202ENST00000397728 ZNF275Q9NSD4 429 aaPredicted RBP13.57□□□□□ -0.24
LSS-202ENST00000397728 UGT2A1Q9Y4X1 527 aa13.57□□□□□ -0.24
LSS-202ENST00000397728 ABCA4P78363 2273 aa13.57□□□□□ -0.24
LSS-202ENST00000397728 AKR1C1Q04828 323 aa13.57□□□□□ -0.24
LSS-202ENST00000397728 MOGAT3Q86VF5 341 aa13.57□□□□□ -0.24
LSS-202ENST00000397728 A1L4Q6 167 aa13.56□□□□□ -0.24
LSS-202ENST00000397728 TGFBR3LH3BV60 316 aa13.56□□□□□ -0.24
LSS-202ENST00000397728 TSPAN4O14817 238 aa13.56□□□□□ -0.24
LSS-202ENST00000397728 PTGFRP43088 359 aa13.56□□□□□ -0.24
LSS-202ENST00000397728 DGCR2P98153 550 aa13.56□□□□□ -0.24
LSS-202ENST00000397728 LGI3Q8N145 548 aa13.56□□□□□ -0.24
LSS-202ENST00000397728 OR6S1Q8NH40 331 aa13.56□□□□□ -0.24
LSS-202ENST00000397728 IMMP1LQ96LU5 166 aa13.56□□□□□ -0.24
LSS-202ENST00000397728 HYLS1Q96M11 299 aa13.56□□□□□ -0.24
LSS-202ENST00000397728 TIMP4Q99727 224 aa13.56□□□□□ -0.24
LSS-202ENST00000397728 CYSLTR2Q9NS75 346 aa13.56□□□□□ -0.24
LSS-202ENST00000397728 COPS3Q9UNS2 423 aa13.56□□□□□ -0.24
LSS-202ENST00000397728 DXOO77932 396 aaKnown RBP13.56□□□□□ -0.24
LSS-202ENST00000397728 CELA3AP09093 270 aa13.56□□□□□ -0.24
LSS-202ENST00000397728 NFYAP23511 347 aaPredicted RBP13.56□□□□□ -0.24
LSS-202ENST00000397728 LY6DQ14210 128 aa13.56□□□□□ -0.24
LSS-202ENST00000397728 IAH1Q2TAA2 248 aaPredicted RBP13.56□□□□□ -0.24
LSS-202ENST00000397728 PRSS27Q9BQR3 290 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms