RNA–Protein interactions for RNA: ENST00000397442.5

CPNE1-203, Transcript of copine 1, humanhuman

TSL 5 BASIC

Gene CPNE1, Length 1,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-203ENST00000397442 C1orf147Q96MC9 270 aaPredicted RBP23.5■■□□□ 1.35
CPNE1-203ENST00000397442 GPER1Q99527 375 aa23.5■■□□□ 1.35
CPNE1-203ENST00000397442 LOC100289279A0A1B0GTE1 492 aa23.49■■□□□ 1.35
CPNE1-203ENST00000397442 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP23.49■■□□□ 1.35
CPNE1-203ENST00000397442 PQLC2LA1A4F0 135 aa23.49■■□□□ 1.35
CPNE1-203ENST00000397442 SIAH2O43255 324 aa23.49■■□□□ 1.35
CPNE1-203ENST00000397442 ARSBP15848 533 aa23.49■■□□□ 1.35
CPNE1-203ENST00000397442 RPS23P62266 143 aaKnown RBP23.49■■□□□ 1.35
CPNE1-203ENST00000397442 VHLLQ6RSH7 139 aa23.49■■□□□ 1.35
CPNE1-203ENST00000397442 DMRTC2Q8IXT2 367 aaPredicted RBP23.49■■□□□ 1.35
CPNE1-203ENST00000397442 OR8G5Q8NG78 346 aa23.49■■□□□ 1.35
CPNE1-203ENST00000397442 OR5D18Q8NGL1 313 aa23.49■■□□□ 1.35
CPNE1-203ENST00000397442 SYNPRQ8TBG9 265 aa23.49■■□□□ 1.35
CPNE1-203ENST00000397442 DIRAS2Q96HU8 199 aa23.49■■□□□ 1.35
CPNE1-203ENST00000397442 NEK6Q9HC98 313 aa23.49■■□□□ 1.35
CPNE1-203ENST00000397442 MRPS28Q9Y2Q9 187 aaKnown RBP23.49■■□□□ 1.35
CPNE1-203ENST00000397442 V9GYH0 126 aa23.49■■□□□ 1.35
CPNE1-203ENST00000397442 CHD6Q8TD26 2715 aa23.49■■□□□ 1.35
CPNE1-203ENST00000397442 TMEM272A0A1B0GTI8 110 aa23.48■■□□□ 1.35
CPNE1-203ENST00000397442 APOA1P02647 267 aa23.48■■□□□ 1.35
CPNE1-203ENST00000397442 NAT2P11245 290 aa23.48■■□□□ 1.35
CPNE1-203ENST00000397442 PTGFRP43088 359 aa23.48■■□□□ 1.35
CPNE1-203ENST00000397442 ADAM5Q6NVV9 412 aa23.48■■□□□ 1.35
CPNE1-203ENST00000397442 CNIH2Q6PI25 160 aa23.48■■□□□ 1.35
CPNE1-203ENST00000397442 C1QL2Q7Z5L3 287 aa23.48■■□□□ 1.35
CPNE1-203ENST00000397442 CMTM3Q96MX0 182 aa23.48■■□□□ 1.35
CPNE1-203ENST00000397442 CXorf56Q9H5V9 222 aa23.48■■□□□ 1.35
CPNE1-203ENST00000397442 HMG20AQ9NP66 347 aa23.48■■□□□ 1.35
CPNE1-203ENST00000397442 CYSLTR2Q9NS75 346 aa23.48■■□□□ 1.35
CPNE1-203ENST00000397442 CA10Q9NS85 328 aa23.48■■□□□ 1.35
CPNE1-203ENST00000397442 IGLV3-9A0A075B6K5 115 aa23.48■■□□□ 1.35
CPNE1-203ENST00000397442 SHISA9B4DS77 424 aa23.48■■□□□ 1.35
CPNE1-203ENST00000397442 IGHV3-13P01766 116 aa23.48■■□□□ 1.35
CPNE1-203ENST00000397442 QRFPP83859 136 aa23.48■■□□□ 1.35
CPNE1-203ENST00000397442 UBE2NLQ5JXB2 153 aa23.48■■□□□ 1.35
CPNE1-203ENST00000397442 AWAT2Q6E213 333 aa23.48■■□□□ 1.35
CPNE1-203ENST00000397442 OR5A2Q8NGI9 324 aa23.48■■□□□ 1.35
CPNE1-203ENST00000397442 MYEF2Q9P2K5 600 aaKnown RBP23.48■■□□□ 1.35
CPNE1-203ENST00000397442 TIMM8AO60220 97 aaPredicted RBP23.47■■□□□ 1.35
CPNE1-203ENST00000397442 ALDH3B1P43353 468 aa23.47■■□□□ 1.35
CPNE1-203ENST00000397442 EFNB2P52799 333 aa23.47■■□□□ 1.35
CPNE1-203ENST00000397442 SPANXN2Q5MJ10 180 aa23.47■■□□□ 1.35
CPNE1-203ENST00000397442 GLIPR1L1Q6UWM5 242 aa23.47■■□□□ 1.35
CPNE1-203ENST00000397442 Q6ZR03 302 aa23.47■■□□□ 1.35
CPNE1-203ENST00000397442 PNLDC1Q8NA58 520 aaKnown RBP23.47■■□□□ 1.35
CPNE1-203ENST00000397442 SOSTQ9BQB4 213 aa23.47■■□□□ 1.35
CPNE1-203ENST00000397442 ADAM30Q9UKF2 790 aa23.47■■□□□ 1.35
CPNE1-203ENST00000397442 RALYQ9UKM9 306 aaKnown RBP23.47■■□□□ 1.35
CPNE1-203ENST00000397442 A0A1B0GWJ7 208 aa23.46■■□□□ 1.35
CPNE1-203ENST00000397442 BPNT1O95861 308 aa23.46■■□□□ 1.35
CPNE1-203ENST00000397442 PEX19P40855 299 aa23.46■■□□□ 1.35
CPNE1-203ENST00000397442 GPM6AP51674 278 aa23.46■■□□□ 1.35
CPNE1-203ENST00000397442 ATP1B3P54709 279 aa23.46■■□□□ 1.35
CPNE1-203ENST00000397442 OR10K2Q6IF99 312 aa23.46■■□□□ 1.35
CPNE1-203ENST00000397442 BIVMQ86UB2 503 aa23.46■■□□□ 1.35
CPNE1-203ENST00000397442 CMTM4Q8IZR5 234 aa23.46■■□□□ 1.35
CPNE1-203ENST00000397442 TNFAIP8L1Q8WVP5 186 aa23.46■■□□□ 1.35
CPNE1-203ENST00000397442 ABCG5Q9H222 651 aa23.46■■□□□ 1.35
CPNE1-203ENST00000397442 DUSP13Q9UII6 198 aa23.46■■□□□ 1.35
CPNE1-203ENST00000397442 DEFB108AA8MXU0 73 aa23.45■■□□□ 1.34
CPNE1-203ENST00000397442 FAM25AB3EWG3 89 aa23.45■■□□□ 1.34
CPNE1-203ENST00000397442 FAM25CB3EWG5 89 aa23.45■■□□□ 1.34
CPNE1-203ENST00000397442 FAM25GB3EWG6 89 aa23.45■■□□□ 1.34
CPNE1-203ENST00000397442 PYCARD-AS1I3L0S3 204 aa23.45■■□□□ 1.34
CPNE1-203ENST00000397442 MLNRO43193 412 aa23.45■■□□□ 1.34
CPNE1-203ENST00000397442 VSIG8P0DPA2 414 aa23.45■■□□□ 1.34
CPNE1-203ENST00000397442 KLF3P57682 345 aaPredicted RBP23.45■■□□□ 1.34
CPNE1-203ENST00000397442 ZNF45Q02386 682 aa23.45■■□□□ 1.34
CPNE1-203ENST00000397442 UNC119Q13432 240 aa23.45■■□□□ 1.34
CPNE1-203ENST00000397442 ZNF846Q147U1 533 aa23.45■■□□□ 1.34
CPNE1-203ENST00000397442 BEX5Q5H9J7 111 aa23.45■■□□□ 1.34
CPNE1-203ENST00000397442 CALHM1Q8IU99 346 aa23.45■■□□□ 1.34
CPNE1-203ENST00000397442 OR4M1Q8NGD0 313 aa23.45■■□□□ 1.34
CPNE1-203ENST00000397442 CPNE2Q96FN4 548 aaPredicted RBP23.45■■□□□ 1.34
CPNE1-203ENST00000397442 RNF170Q96K19 258 aa23.45■■□□□ 1.34
CPNE1-203ENST00000397442 HIST1H2AAQ96QV6 131 aa23.45■■□□□ 1.34
CPNE1-203ENST00000397442 SYT3Q9BQG1 590 aa23.45■■□□□ 1.34
CPNE1-203ENST00000397442 MRPL37Q9BZE1 423 aaKnown RBP23.45■■□□□ 1.34
CPNE1-203ENST00000397442 WDR12Q9GZL7 423 aaKnown RBP23.45■■□□□ 1.34
CPNE1-203ENST00000397442 ZNF442Q9H7R0 627 aa23.45■■□□□ 1.34
CPNE1-203ENST00000397442 RHBDL2Q9NX52 303 aa23.45■■□□□ 1.34
CPNE1-203ENST00000397442 FLNCQ14315 2725 aa23.45■■□□□ 1.34
CPNE1-203ENST00000397442 ZNF732B4DXR9 585 aa23.44■■□□□ 1.34
CPNE1-203ENST00000397442 H0YL77 283 aa23.44■■□□□ 1.34
CPNE1-203ENST00000397442 LOXP28300 417 aaPredicted RBP23.44■■□□□ 1.34
CPNE1-203ENST00000397442 CAPZA1P52907 286 aa23.44■■□□□ 1.34
CPNE1-203ENST00000397442 MRPL24Q96A35 216 aaKnown RBP23.44■■□□□ 1.34
CPNE1-203ENST00000397442 ADAT1Q9BUB4 502 aaKnown RBP23.44■■□□□ 1.34
CPNE1-203ENST00000397442 TMEM100Q9NV29 134 aa23.44■■□□□ 1.34
CPNE1-203ENST00000397442 FBLN5Q9UBX5 448 aa23.44■■□□□ 1.34
CPNE1-203ENST00000397442 ATP23Q9Y6H3 246 aa23.44■■□□□ 1.34
CPNE1-203ENST00000397442 FAM208BQ5VWN6 2430 aa23.44■■□□□ 1.34
CPNE1-203ENST00000397442 OR5B21A6NL26 309 aa23.44■■□□□ 1.34
CPNE1-203ENST00000397442 C19orf84I3L1E1 186 aa23.44■■□□□ 1.34
CPNE1-203ENST00000397442 J3QRK9 145 aa23.44■■□□□ 1.34
CPNE1-203ENST00000397442 CD3EP07766 207 aa23.44■■□□□ 1.34
CPNE1-203ENST00000397442 ART1P52961 327 aa23.44■■□□□ 1.34
CPNE1-203ENST00000397442 ZNF79Q15937 498 aa23.44■■□□□ 1.34
CPNE1-203ENST00000397442 MSL2Q9HCI7 577 aa23.44■■□□□ 1.34
CPNE1-203ENST00000397442 EXTL2Q9UBQ6 330 aa23.44■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 113.7 ms