RNA–Protein interactions for RNA: ENST00000397053.6

UPF2-203, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 5 BASIC

Gene UPF2, Length 5,369 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-203ENST00000397053 SOWAHCQ53LP3 525 aaPredicted RBP6.46□□□□□ -1.38
UPF2-203ENST00000397053 SAXO2Q658L1 398 aa6.46□□□□□ -1.38
UPF2-203ENST00000397053 TIGD3Q6B0B8 471 aa6.46□□□□□ -1.38
UPF2-203ENST00000397053 TRNP1Q6NT89 227 aa6.46□□□□□ -1.38
UPF2-203ENST00000397053 FAHD2BQ6P2I3 314 aaPredicted RBP6.46□□□□□ -1.38
UPF2-203ENST00000397053 TRAT1Q6PIZ9 186 aa6.46□□□□□ -1.38
UPF2-203ENST00000397053 NHLRC1Q6VVB1 395 aa6.46□□□□□ -1.38
UPF2-203ENST00000397053 WFDC3Q8IUB2 231 aa6.46□□□□□ -1.38
UPF2-203ENST00000397053 ZNF441Q8N8Z8 693 aa6.46□□□□□ -1.38
UPF2-203ENST00000397053 OR52I2Q8NH67 350 aa6.46□□□□□ -1.38
UPF2-203ENST00000397053 OR10D3Q8NH80 312 aa6.46□□□□□ -1.38
UPF2-203ENST00000397053 TMED6Q8WW62 240 aa6.46□□□□□ -1.38
UPF2-203ENST00000397053 FAHD2AQ96GK7 314 aa6.46□□□□□ -1.38
UPF2-203ENST00000397053 VN1R1Q9GZP7 353 aa6.46□□□□□ -1.38
UPF2-203ENST00000397053 PIGMQ9H3S5 423 aa6.46□□□□□ -1.38
UPF2-203ENST00000397053 CLEC2DQ9UHP7 191 aa6.46□□□□□ -1.38
UPF2-203ENST00000397053 VSIG4Q9Y279 399 aa6.46□□□□□ -1.38
UPF2-203ENST00000397053 CADP27708 2225 aa6.46□□□□□ -1.38
UPF2-203ENST00000397053 HSPB2A8KAH6 182 aa6.45□□□□□ -1.38
UPF2-203ENST00000397053 SHISA8B8ZZ34 492 aa6.45□□□□□ -1.38
UPF2-203ENST00000397053 SOX15O60248 233 aa6.45□□□□□ -1.38
UPF2-203ENST00000397053 ADAM11O75078 769 aa6.45□□□□□ -1.38
UPF2-203ENST00000397053 FGF2P09038 288 aa6.45□□□□□ -1.38
UPF2-203ENST00000397053 ACSM4P0C7M7 580 aa6.45□□□□□ -1.38
UPF2-203ENST00000397053 FPR2P25090 351 aa6.45□□□□□ -1.38
UPF2-203ENST00000397053 PSMB6P28072 239 aa6.45□□□□□ -1.38
UPF2-203ENST00000397053 CD80P33681 288 aa6.45□□□□□ -1.38
UPF2-203ENST00000397053 THBS4P35443 961 aa6.45□□□□□ -1.38
UPF2-203ENST00000397053 KCNJ3P48549 501 aa6.45□□□□□ -1.38
UPF2-203ENST00000397053 H3F3AP84243 136 aa6.45□□□□□ -1.38
UPF2-203ENST00000397053 GGTLC2Q14390 218 aa6.45□□□□□ -1.38
UPF2-203ENST00000397053 HSPB2Q16082 182 aa6.45□□□□□ -1.38
UPF2-203ENST00000397053 Q3ZCU0 254 aa6.45□□□□□ -1.38
UPF2-203ENST00000397053 PABPC1L2AQ5JQF8 200 aa6.45□□□□□ -1.38
UPF2-203ENST00000397053 GGNBP1Q5YKI7 109 aa6.45□□□□□ -1.38
UPF2-203ENST00000397053 OR8I2Q8N0Y5 310 aa6.45□□□□□ -1.38
UPF2-203ENST00000397053 SYS1Q8N2H4 156 aa6.45□□□□□ -1.38
UPF2-203ENST00000397053 OR4S1Q8NGB4 309 aa6.45□□□□□ -1.38
UPF2-203ENST00000397053 FGF11Q92914 225 aa6.45□□□□□ -1.38
UPF2-203ENST00000397053 RHNO1Q9BSD3 238 aa6.45□□□□□ -1.38
UPF2-203ENST00000397053 PTDSS2Q9BVG9 487 aa6.45□□□□□ -1.38
UPF2-203ENST00000397053 LHX9Q9NQ69 397 aa6.45□□□□□ -1.38
UPF2-203ENST00000397053 PCOLCE2Q9UKZ9 415 aa6.45□□□□□ -1.38
UPF2-203ENST00000397053 B9D1Q9UPM9 204 aa6.45□□□□□ -1.38
UPF2-203ENST00000397053 TMEM129A0AVI4 362 aa6.45□□□□□ -1.38
UPF2-203ENST00000397053 RFPL4AA6NLU0 287 aa6.45□□□□□ -1.38
UPF2-203ENST00000397053 C9orf172C9J069 976 aa6.45□□□□□ -1.38
UPF2-203ENST00000397053 RFPL4AL1F8VTS6 287 aa6.45□□□□□ -1.38
UPF2-203ENST00000397053 ATF1P18846 271 aa6.45□□□□□ -1.38
UPF2-203ENST00000397053 LYZP61626 148 aa6.45□□□□□ -1.38
UPF2-203ENST00000397053 ZXDAP98168 799 aa6.45□□□□□ -1.38
UPF2-203ENST00000397053 ZNF683Q8IZ20 524 aa6.45□□□□□ -1.38
UPF2-203ENST00000397053 NOL4LQ96MY1 436 aaPredicted RBP6.45□□□□□ -1.38
UPF2-203ENST00000397053 GPR87Q9BY21 358 aa6.45□□□□□ -1.38
UPF2-203ENST00000397053 PRDM14Q9GZV8 571 aa6.45□□□□□ -1.38
UPF2-203ENST00000397053 TMEM231Q9H6L2 316 aa6.45□□□□□ -1.38
UPF2-203ENST00000397053 J3KRW8 73 aa6.45□□□□□ -1.38
UPF2-203ENST00000397053 BMPR1BO00238 502 aa6.45□□□□□ -1.38
UPF2-203ENST00000397053 CXCL10P02778 98 aa6.45□□□□□ -1.38
UPF2-203ENST00000397053 EPXP11678 715 aa6.45□□□□□ -1.38
UPF2-203ENST00000397053 CEACAM6P40199 344 aa6.45□□□□□ -1.38
UPF2-203ENST00000397053 FOXO1Q12778 655 aa6.45□□□□□ -1.38
UPF2-203ENST00000397053 SRSF5Q13243 272 aaKnown RBP6.45□□□□□ -1.38
UPF2-203ENST00000397053 SKP2Q13309 424 aa6.45□□□□□ -1.38
UPF2-203ENST00000397053 KIRREL2Q6UWL6 708 aa6.45□□□□□ -1.38
UPF2-203ENST00000397053 KIAA1958Q8N8K9 716 aa6.45□□□□□ -1.38
UPF2-203ENST00000397053 MARCH1Q8TCQ1 289 aa6.45□□□□□ -1.38
UPF2-203ENST00000397053 GPBAR1Q8TDU6 330 aa6.45□□□□□ -1.38
UPF2-203ENST00000397053 RXFP4Q8TDU9 374 aa6.45□□□□□ -1.38
UPF2-203ENST00000397053 CLDN23Q96B33 292 aa6.45□□□□□ -1.38
UPF2-203ENST00000397053 C14orf79Q96F83 325 aa6.45□□□□□ -1.38
UPF2-203ENST00000397053 MRGPRX3Q96LB0 322 aa6.45□□□□□ -1.38
UPF2-203ENST00000397053 TGIF2Q9GZN2 237 aa6.45□□□□□ -1.38
UPF2-203ENST00000397053 ACACAQ13085 2346 aa6.45□□□□□ -1.38
UPF2-203ENST00000397053 UMAD1C9J7I0 102 aa6.45□□□□□ -1.38
UPF2-203ENST00000397053 K7ESF4 209 aa6.45□□□□□ -1.38
UPF2-203ENST00000397053 OR2C1O95371 312 aa6.45□□□□□ -1.38
UPF2-203ENST00000397053 FAM87AP0C7U9 286 aa6.45□□□□□ -1.38
UPF2-203ENST00000397053 CD37P11049 281 aa6.45□□□□□ -1.38
UPF2-203ENST00000397053 CD1BP29016 333 aa6.45□□□□□ -1.38
UPF2-203ENST00000397053 UQCRFS1P47985 274 aa6.45□□□□□ -1.38
UPF2-203ENST00000397053 SPCS3P61009 180 aa6.45□□□□□ -1.38
UPF2-203ENST00000397053 PPP1CBP62140 327 aa6.45□□□□□ -1.38
UPF2-203ENST00000397053 RELAQ04206 551 aa6.45□□□□□ -1.38
UPF2-203ENST00000397053 IGFBP7Q16270 282 aa6.45□□□□□ -1.38
UPF2-203ENST00000397053 TCTN1Q2MV58 587 aa6.45□□□□□ -1.38
UPF2-203ENST00000397053 OR13C5Q8NGS8 318 aa6.45□□□□□ -1.38
UPF2-203ENST00000397053 OR1L1Q8NH94 360 aa6.45□□□□□ -1.38
UPF2-203ENST00000397053 PRSS3P2Q8NHM4 247 aa6.45□□□□□ -1.38
UPF2-203ENST00000397053 UBE2FQ969M7 185 aa6.45□□□□□ -1.38
UPF2-203ENST00000397053 PCGF1Q9BSM1 259 aa6.45□□□□□ -1.38
UPF2-203ENST00000397053 SLC7A10Q9NS82 523 aa6.45□□□□□ -1.38
UPF2-203ENST00000397053 LSM2Q9Y333 95 aaKnown RBP6.45□□□□□ -1.38
UPF2-203ENST00000397053 COL14A1Q05707 1796 aaKnown RBP6.45□□□□□ -1.38
UPF2-203ENST00000397053 C16orf97H3BN30 126 aa6.44□□□□□ -1.38
UPF2-203ENST00000397053 CST7O76096 145 aa6.44□□□□□ -1.38
UPF2-203ENST00000397053 IGHV3-13P01766 116 aa6.44□□□□□ -1.38
UPF2-203ENST00000397053 IGHV3-7P01780 117 aa6.44□□□□□ -1.38
UPF2-203ENST00000397053 ZNF32P17041 273 aa6.44□□□□□ -1.38
UPF2-203ENST00000397053 ORM2P19652 201 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms