RNA–Protein interactions for RNA: ENST00000395667.7

CDRT1-203, CMT1A duplicated region transcript 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CDRT1, Length 3,016 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-203ENST00000395667 SNAI3Q3KNW1 292 aa8.1□□□□□ -1.11
CDRT1-203ENST00000395667 MOB3CQ70IA8 216 aa8.1□□□□□ -1.11
CDRT1-203ENST00000395667 DTX1Q86Y01 620 aa8.1□□□□□ -1.11
CDRT1-203ENST00000395667 EIF4E3Q8N5X7 224 aaKnown RBP8.1□□□□□ -1.11
CDRT1-203ENST00000395667 ZIC4Q8N9L1 334 aa8.1□□□□□ -1.11
CDRT1-203ENST00000395667 BOLLQ8N9W6 283 aaKnown RBP8.1□□□□□ -1.11
CDRT1-203ENST00000395667 SPERTQ8NA61 448 aa8.1□□□□□ -1.11
CDRT1-203ENST00000395667 ROBO4Q8WZ75 1007 aa8.1□□□□□ -1.11
CDRT1-203ENST00000395667 HAS2Q92819 552 aa8.1□□□□□ -1.11
CDRT1-203ENST00000395667 INTS12Q96CB8 462 aaKnown RBP8.1□□□□□ -1.11
CDRT1-203ENST00000395667 FBXO17Q96EF6 278 aa8.1□□□□□ -1.11
CDRT1-203ENST00000395667 MRPS24Q96EL2 167 aaKnown RBP8.1□□□□□ -1.11
CDRT1-203ENST00000395667 GPR173Q9NS66 373 aa8.1□□□□□ -1.11
CDRT1-203ENST00000395667 PLEKHJ1Q9NW61 149 aa8.1□□□□□ -1.11
CDRT1-203ENST00000395667 AHCTF1Q8WYP5 2266 aa8.09□□□□□ -1.11
CDRT1-203ENST00000395667 SGCEO43556 437 aa8.09□□□□□ -1.11
CDRT1-203ENST00000395667 PLATP00750 562 aa8.09□□□□□ -1.11
CDRT1-203ENST00000395667 KNG1P01042 644 aa8.09□□□□□ -1.11
CDRT1-203ENST00000395667 SERPINA5P05154 406 aa8.09□□□□□ -1.11
CDRT1-203ENST00000395667 GLRA1P23415 457 aa8.09□□□□□ -1.11
CDRT1-203ENST00000395667 OTX2P32243 289 aa8.09□□□□□ -1.11
CDRT1-203ENST00000395667 MTCP1P56278 107 aa8.09□□□□□ -1.11
CDRT1-203ENST00000395667 MC2RQ01718 297 aa8.09□□□□□ -1.11
CDRT1-203ENST00000395667 EIF3IQ13347 325 aaKnown RBP8.09□□□□□ -1.11
CDRT1-203ENST00000395667 ARL6IP1Q15041 203 aa8.09□□□□□ -1.11
CDRT1-203ENST00000395667 FOXL2NBQ6ZUU3 175 aa8.09□□□□□ -1.11
CDRT1-203ENST00000395667 C6orf201Q7Z4U5 140 aa8.09□□□□□ -1.11
CDRT1-203ENST00000395667 WDR5BQ86VZ2 330 aa8.09□□□□□ -1.11
CDRT1-203ENST00000395667 OR52H1Q8NGJ2 320 aa8.09□□□□□ -1.11
CDRT1-203ENST00000395667 OR2AE1Q8NHA4 323 aa8.09□□□□□ -1.11
CDRT1-203ENST00000395667 FOXD3Q9UJU5 478 aaPredicted RBP8.09□□□□□ -1.11
CDRT1-203ENST00000395667 PCDHGA1Q9Y5H4 931 aa8.09□□□□□ -1.11
CDRT1-203ENST00000395667 FRYLO94915 3013 aa8.09□□□□□ -1.11
CDRT1-203ENST00000395667 NTN3O00634 580 aaPredicted RBP8.09□□□□□ -1.11
CDRT1-203ENST00000395667 NUPL2O15504 423 aaKnown RBP8.09□□□□□ -1.11
CDRT1-203ENST00000395667 PDGFBP01127 241 aaPredicted RBP8.09□□□□□ -1.11
CDRT1-203ENST00000395667 GP1BAP07359 652 aa8.09□□□□□ -1.11
CDRT1-203ENST00000395667 HOXA6P31267 233 aa8.09□□□□□ -1.11
CDRT1-203ENST00000395667 OTX1P32242 354 aaPredicted RBP8.09□□□□□ -1.11
CDRT1-203ENST00000395667 ALDH3B1P43353 468 aa8.09□□□□□ -1.11
CDRT1-203ENST00000395667 ZNF133P52736 654 aaPredicted RBP8.09□□□□□ -1.11
CDRT1-203ENST00000395667 HIST1H3AP68431 136 aa8.09□□□□□ -1.11
CDRT1-203ENST00000395667 MRPS34P82930 218 aaKnown RBP8.09□□□□□ -1.11
CDRT1-203ENST00000395667 HIST2H3PS2Q5TEC6 136 aa8.09□□□□□ -1.11
CDRT1-203ENST00000395667 FAM27BQ5VT28 67 aa8.09□□□□□ -1.11
CDRT1-203ENST00000395667 HIST2H3AQ71DI3 136 aa8.09□□□□□ -1.11
CDRT1-203ENST00000395667 Q7L0L9 218 aa8.09□□□□□ -1.11
CDRT1-203ENST00000395667 C20orf196Q8IYI0 205 aa8.09□□□□□ -1.11
CDRT1-203ENST00000395667 SEMA6DQ8NFY4 1073 aa8.09□□□□□ -1.11
CDRT1-203ENST00000395667 OR5AP2Q8NGF4 316 aa8.09□□□□□ -1.11
CDRT1-203ENST00000395667 SGK3Q96BR1 496 aa8.09□□□□□ -1.11
CDRT1-203ENST00000395667 RTBDNQ9BSG5 229 aaPredicted RBP8.09□□□□□ -1.11
CDRT1-203ENST00000395667 CRLF2Q9HC73 371 aa8.09□□□□□ -1.11
CDRT1-203ENST00000395667 RAB18Q9NP72 206 aa8.09□□□□□ -1.11
CDRT1-203ENST00000395667 GSKIPQ9P0R6 139 aa8.09□□□□□ -1.11
CDRT1-203ENST00000395667 GLS2Q9UI32 602 aa8.09□□□□□ -1.11
CDRT1-203ENST00000395667 C14orf166Q9Y224 244 aaKnown RBP8.09□□□□□ -1.11
CDRT1-203ENST00000395667 A0A0B4J2A0 478 aa8.08□□□□□ -1.12
CDRT1-203ENST00000395667 A0A0G2JMM0 328 aa8.08□□□□□ -1.12
CDRT1-203ENST00000395667 A0A1W2PPB8 328 aa8.08□□□□□ -1.12
CDRT1-203ENST00000395667 FAM230AA0A1W2PPH8 454 aa8.08□□□□□ -1.12
CDRT1-203ENST00000395667 A0A1W2PRS3 328 aa8.08□□□□□ -1.12
CDRT1-203ENST00000395667 CEACAM18A8MTB9 384 aa8.08□□□□□ -1.12
CDRT1-203ENST00000395667 KIR3DP1A8MWS1 328 aa8.08□□□□□ -1.12
CDRT1-203ENST00000395667 TRAPPC6AO75865 159 aa8.08□□□□□ -1.12
CDRT1-203ENST00000395667 CER1O95813 267 aa8.08□□□□□ -1.12
CDRT1-203ENST00000395667 CSTBP04080 98 aaKnown RBP8.08□□□□□ -1.12
CDRT1-203ENST00000395667 LCATP04180 440 aa8.08□□□□□ -1.12
CDRT1-203ENST00000395667 TPT1P13693 172 aaKnown RBP8.08□□□□□ -1.12
CDRT1-203ENST00000395667 PRKACBP22694 351 aa8.08□□□□□ -1.12
CDRT1-203ENST00000395667 PRSS12P56730 875 aa8.08□□□□□ -1.12
CDRT1-203ENST00000395667 CARD18P57730 90 aa8.08□□□□□ -1.12
CDRT1-203ENST00000395667 RAC3P60763 192 aa8.08□□□□□ -1.12
CDRT1-203ENST00000395667 RPS18P62269 152 aaKnown RBP8.08□□□□□ -1.12
CDRT1-203ENST00000395667 PPIAP62937 165 aaKnown RBP8.08□□□□□ -1.12
CDRT1-203ENST00000395667 DEFA5Q01523 94 aa8.08□□□□□ -1.12
CDRT1-203ENST00000395667 ZFP36L1Q07352 338 aaKnown RBP8.08□□□□□ -1.12
CDRT1-203ENST00000395667 ANKRD55Q3KP44 614 aa8.08□□□□□ -1.12
CDRT1-203ENST00000395667 TRIM61Q5EBN2 209 aa8.08□□□□□ -1.12
CDRT1-203ENST00000395667 AADACL3Q5VUY0 350 aa8.08□□□□□ -1.12
CDRT1-203ENST00000395667 ZNF774Q6NX45 483 aa8.08□□□□□ -1.12
CDRT1-203ENST00000395667 CRIP3Q6Q6R5 217 aa8.08□□□□□ -1.12
CDRT1-203ENST00000395667 CCDC36Q8IYA8 594 aa8.08□□□□□ -1.12
CDRT1-203ENST00000395667 SGCZQ96LD1 299 aa8.08□□□□□ -1.12
CDRT1-203ENST00000395667 IER2Q9BTL4 223 aa8.08□□□□□ -1.12
CDRT1-203ENST00000395667 DNTTIP1Q9H147 329 aa8.08□□□□□ -1.12
CDRT1-203ENST00000395667 SH2D2AQ9NP31 389 aa8.08□□□□□ -1.12
CDRT1-203ENST00000395667 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP8.08□□□□□ -1.12
CDRT1-203ENST00000395667 ZC4H2Q9NQZ6 224 aa8.08□□□□□ -1.12
CDRT1-203ENST00000395667 ASF1BQ9NVP2 202 aa8.08□□□□□ -1.12
CDRT1-203ENST00000395667 SHPKQ9UHJ6 478 aa8.08□□□□□ -1.12
CDRT1-203ENST00000395667 OSGIN2Q9Y236 505 aa8.08□□□□□ -1.12
CDRT1-203ENST00000395667 MPTX1A8MV57 137 aa8.08□□□□□ -1.12
CDRT1-203ENST00000395667 SIGLEC5O15389 551 aa8.08□□□□□ -1.12
CDRT1-203ENST00000395667 LAMTOR5O43504 91 aa8.08□□□□□ -1.12
CDRT1-203ENST00000395667 ANGPTL7O43827 346 aa8.08□□□□□ -1.12
CDRT1-203ENST00000395667 HOXB5P09067 269 aa8.08□□□□□ -1.12
CDRT1-203ENST00000395667 B4GALT1P15291 398 aa8.08□□□□□ -1.12
CDRT1-203ENST00000395667 SUPT4H1P63272 117 aaKnown RBP8.08□□□□□ -1.12
CDRT1-203ENST00000395667 SIGLEC14Q08ET2 396 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms