RNA–Protein interactions for RNA: ENST00000394729.6

PRKCD-202, Transcript of protein kinase C delta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKCD, Length 2,810 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCD-202ENST00000394729 RAB3DO95716 219 aa17.61■□□□□ 0.41
PRKCD-202ENST00000394729 ECDO95905 644 aaPredicted RBP17.61■□□□□ 0.41
PRKCD-202ENST00000394729 PMP2P02689 132 aa17.61■□□□□ 0.41
PRKCD-202ENST00000394729 SELEP16581 610 aa17.61■□□□□ 0.41
PRKCD-202ENST00000394729 SNRPD2P62316 118 aaKnown RBP17.61■□□□□ 0.41
PRKCD-202ENST00000394729 MRPL21Q7Z2W9 205 aaKnown RBP17.61■□□□□ 0.41
PRKCD-202ENST00000394729 GABRG1Q8N1C3 465 aa17.61■□□□□ 0.41
PRKCD-202ENST00000394729 AKAP1Q92667 903 aaKnown RBP eCLIP17.61■□□□□ 0.41
PRKCD-202ENST00000394729 NUBP2Q9Y5Y2 271 aa17.61■□□□□ 0.41
PRKCD-202ENST00000394729 GSTT2BP0CG30 244 aa17.6■□□□□ 0.41
PRKCD-202ENST00000394729 TMEM50BP56557 158 aa17.6■□□□□ 0.41
PRKCD-202ENST00000394729 RRAS2P62070 204 aaPredicted RBP17.6■□□□□ 0.41
PRKCD-202ENST00000394729 DYRK1AQ13627 763 aa17.6■□□□□ 0.41
PRKCD-202ENST00000394729 PIGYQ3MUY2 71 aa17.6■□□□□ 0.41
PRKCD-202ENST00000394729 IGFL2Q6UWQ7 119 aa17.6■□□□□ 0.41
PRKCD-202ENST00000394729 CALHM1Q8IU99 346 aa17.6■□□□□ 0.41
PRKCD-202ENST00000394729 OR10R2Q8NGX6 335 aa17.6■□□□□ 0.41
PRKCD-202ENST00000394729 PPP1R14BQ96C90 147 aa17.6■□□□□ 0.41
PRKCD-202ENST00000394729 TP53TG5Q9Y2B4 290 aa17.6■□□□□ 0.41
PRKCD-202ENST00000394729 DIDO1Q9BTC0 2240 aaKnown RBP17.6■□□□□ 0.41
PRKCD-202ENST00000394729 IGLV3-1P01715 115 aa17.6■□□□□ 0.41
PRKCD-202ENST00000394729 LPLP06858 475 aa17.6■□□□□ 0.41
PRKCD-202ENST00000394729 THBS4P35443 961 aa17.6■□□□□ 0.41
PRKCD-202ENST00000394729 GPM6AP51674 278 aa17.6■□□□□ 0.41
PRKCD-202ENST00000394729 RFPL4BQ6ZWI9 263 aa17.6■□□□□ 0.41
PRKCD-202ENST00000394729 FAM214BQ7L5A3 538 aa17.6■□□□□ 0.41
PRKCD-202ENST00000394729 SPACA3Q8IXA5 215 aa17.6■□□□□ 0.41
PRKCD-202ENST00000394729 RBMXL3Q8N7X1 1067 aaKnown RBP17.6■□□□□ 0.41
PRKCD-202ENST00000394729 OR11H7Q8NGC8 314 aa17.6■□□□□ 0.41
PRKCD-202ENST00000394729 GPX8Q8TED1 209 aa17.6■□□□□ 0.41
PRKCD-202ENST00000394729 WDR89Q96FK6 387 aaPredicted RBP17.6■□□□□ 0.41
PRKCD-202ENST00000394729 LINC00470Q9BZP3 86 aa17.6■□□□□ 0.41
PRKCD-202ENST00000394729 IFT46Q9NQC8 304 aa17.6■□□□□ 0.41
PRKCD-202ENST00000394729 hCG_38984A0A1B0GV85 526 aa17.59■□□□□ 0.41
PRKCD-202ENST00000394729 TMEM14DPA8MWL7 114 aa17.59■□□□□ 0.41
PRKCD-202ENST00000394729 ZNF736B4DX44 427 aaPredicted RBP17.59■□□□□ 0.41
PRKCD-202ENST00000394729 CSTBP04080 98 aaKnown RBP17.59■□□□□ 0.41
PRKCD-202ENST00000394729 DUSP1P28562 367 aa17.59■□□□□ 0.41
PRKCD-202ENST00000394729 MPGP29372 298 aa17.59■□□□□ 0.41
PRKCD-202ENST00000394729 GNG2P59768 71 aa17.59■□□□□ 0.41
PRKCD-202ENST00000394729 HOXA4Q00056 320 aaPredicted RBP17.59■□□□□ 0.41
PRKCD-202ENST00000394729 RSU1Q15404 277 aa17.59■□□□□ 0.41
PRKCD-202ENST00000394729 ZNF260Q3ZCT1 412 aa17.59■□□□□ 0.41
PRKCD-202ENST00000394729 OR2T2Q6IF00 324 aa17.59■□□□□ 0.41
PRKCD-202ENST00000394729 IDO2Q6ZQW0 420 aa17.59■□□□□ 0.41
PRKCD-202ENST00000394729 OR1K1Q8NGR3 316 aa17.59■□□□□ 0.41
PRKCD-202ENST00000394729 PP6455Q8WZ26 134 aa17.59■□□□□ 0.41
PRKCD-202ENST00000394729 OR51J1Q9H342 316 aa17.59■□□□□ 0.41
PRKCD-202ENST00000394729 ZNF701Q9NV72 531 aaPredicted RBP17.59■□□□□ 0.41
PRKCD-202ENST00000394729 FAM87AP0C7U9 286 aa17.59■□□□□ 0.41
PRKCD-202ENST00000394729 HRH1P35367 487 aa17.59■□□□□ 0.41
PRKCD-202ENST00000394729 CISD2Q8N5K1 135 aaKnown RBP17.59■□□□□ 0.41
PRKCD-202ENST00000394729 KCNG3Q8TAE7 436 aa17.59■□□□□ 0.41
PRKCD-202ENST00000394729 SARAFQ96BY9 339 aa17.59■□□□□ 0.41
PRKCD-202ENST00000394729 SDCBPO00560 298 aaPredicted RBP17.58■□□□□ 0.41
PRKCD-202ENST00000394729 APLNRP35414 380 aa17.58■□□□□ 0.41
PRKCD-202ENST00000394729 WNT5AP41221 380 aa17.58■□□□□ 0.41
PRKCD-202ENST00000394729 BTN2A1Q7KYR7 527 aa17.58■□□□□ 0.41
PRKCD-202ENST00000394729 GMPPAQ96IJ6 420 aaPredicted RBP17.58■□□□□ 0.41
PRKCD-202ENST00000394729 CLCF1Q9UBD9 225 aa17.58■□□□□ 0.41
PRKCD-202ENST00000394729 SFTPBP07988 381 aa17.58■□□□□ 0.4
PRKCD-202ENST00000394729 KIR2DL2P43627 348 aaPredicted RBP17.58■□□□□ 0.4
PRKCD-202ENST00000394729 UBE2NP61088 152 aaKnown RBP17.58■□□□□ 0.4
PRKCD-202ENST00000394729 TFAP2EQ6VUC0 442 aa17.58■□□□□ 0.4
PRKCD-202ENST00000394729 SLC30A7Q8NEW0 376 aa17.58■□□□□ 0.4
PRKCD-202ENST00000394729 LHX6Q9UPM6 363 aa17.58■□□□□ 0.4
PRKCD-202ENST00000394729 TTLL8A6PVC2 850 aa17.57■□□□□ 0.4
PRKCD-202ENST00000394729 IGHG3P01860 377 aa17.57■□□□□ 0.4
PRKCD-202ENST00000394729 AKAIN1P0CW23 69 aa17.57■□□□□ 0.4
PRKCD-202ENST00000394729 NPBWR2P48146 333 aa17.57■□□□□ 0.4
PRKCD-202ENST00000394729 IGF2-ASQ6U949 168 aa17.57■□□□□ 0.4
PRKCD-202ENST00000394729 SLC25A26Q70HW3 274 aa17.57■□□□□ 0.4
PRKCD-202ENST00000394729 ZNF610Q8N9Z0 462 aa17.57■□□□□ 0.4
PRKCD-202ENST00000394729 PEX14O75381 377 aa17.57■□□□□ 0.4
PRKCD-202ENST00000394729 SIX6O95475 246 aa17.57■□□□□ 0.4
PRKCD-202ENST00000394729 CSF1P09603 554 aa17.57■□□□□ 0.4
PRKCD-202ENST00000394729 PI3P19957 117 aa17.57■□□□□ 0.4
PRKCD-202ENST00000394729 RBP2P50120 134 aa17.57■□□□□ 0.4
PRKCD-202ENST00000394729 PRR30Q53SZ7 412 aaPredicted RBP17.57■□□□□ 0.4
PRKCD-202ENST00000394729 BPIFB2Q8N4F0 458 aa17.57■□□□□ 0.4
PRKCD-202ENST00000394729 ITPKCQ96DU7 683 aa17.57■□□□□ 0.4
PRKCD-202ENST00000394729 ZNF488Q96MN9 340 aa17.57■□□□□ 0.4
PRKCD-202ENST00000394729 SLC6A7Q99884 636 aa17.57■□□□□ 0.4
PRKCD-202ENST00000394729 PRDM14Q9GZV8 571 aa17.57■□□□□ 0.4
PRKCD-202ENST00000394729 IRF2BPLQ9H1B7 796 aa17.57■□□□□ 0.4
PRKCD-202ENST00000394729 IL36RNQ9UBH0 155 aa17.57■□□□□ 0.4
PRKCD-202ENST00000394729 SPTAN1Q13813 2472 aaKnown RBP17.57■□□□□ 0.4
PRKCD-202ENST00000394729 IGKV1-12A0A0C4DH73 117 aa17.57■□□□□ 0.4
PRKCD-202ENST00000394729 IGKV1D-12P01611 117 aa17.57■□□□□ 0.4
PRKCD-202ENST00000394729 MRPS10P82664 201 aaKnown RBP17.57■□□□□ 0.4
PRKCD-202ENST00000394729 POM121L2Q96KW2 1035 aa17.57■□□□□ 0.4
PRKCD-202ENST00000394729 HS3ST6Q96QI5 342 aa17.57■□□□□ 0.4
PRKCD-202ENST00000394729 CST11Q9H112 138 aa17.57■□□□□ 0.4
PRKCD-202ENST00000394729 SSX5O60225 188 aa17.56■□□□□ 0.4
PRKCD-202ENST00000394729 HAAOP46952 286 aa17.56■□□□□ 0.4
PRKCD-202ENST00000394729 OR3A2P47893 321 aa17.56■□□□□ 0.4
PRKCD-202ENST00000394729 SCAND1P57086 179 aa17.56■□□□□ 0.4
PRKCD-202ENST00000394729 CXADRP78310 365 aa17.56■□□□□ 0.4
PRKCD-202ENST00000394729 GHITMQ9H3K2 345 aa17.56■□□□□ 0.4
PRKCD-202ENST00000394729 RPL36A-HNRNPH2H7BZ11 118 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms