RNA–Protein interactions for RNA: ENST00000394440.7

CCT4-201, Transcript of chaperonin containing TCP1 subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCT4, Length 2,520 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT4-201ENST00000394440 APLNRP35414 380 aa12.92□□□□□ -0.34
CCT4-201ENST00000394440 RAB25P57735 213 aa12.92□□□□□ -0.34
CCT4-201ENST00000394440 FAM189A2Q15884 450 aa12.92□□□□□ -0.34
CCT4-201ENST00000394440 SLC22A6Q4U2R8 563 aa12.92□□□□□ -0.34
CCT4-201ENST00000394440 LHFPL2Q6ZUX7 228 aa12.92□□□□□ -0.34
CCT4-201ENST00000394440 RTN4RL2Q86UN3 420 aa12.92□□□□□ -0.34
CCT4-201ENST00000394440 ST6GAL2Q96JF0 529 aa12.92□□□□□ -0.34
CCT4-201ENST00000394440 KCNN3Q9UGI6 736 aa12.92□□□□□ -0.34
CCT4-201ENST00000394440 FAM215AQ9Y5M1 114 aa12.92□□□□□ -0.34
CCT4-201ENST00000394440 BSNQ9UPA5 3926 aa12.92□□□□□ -0.34
CCT4-201ENST00000394440 CRTAPO75718 401 aaPredicted RBP12.91□□□□□ -0.34
CCT4-201ENST00000394440 TOXO94900 526 aa12.91□□□□□ -0.34
CCT4-201ENST00000394440 PSMB1P20618 241 aaKnown RBP12.91□□□□□ -0.34
CCT4-201ENST00000394440 MTCP1P56278 107 aa12.91□□□□□ -0.34
CCT4-201ENST00000394440 TMEM50BP56557 158 aa12.91□□□□□ -0.34
CCT4-201ENST00000394440 SF3B4Q15427 424 aaKnown RBP eCLIP12.91□□□□□ -0.342e-8■■■■■ 28
CCT4-201ENST00000394440 CDNFQ49AH0 187 aa12.91□□□□□ -0.34
CCT4-201ENST00000394440 ASCL4Q6XD76 172 aa12.91□□□□□ -0.34
CCT4-201ENST00000394440 C1orf162Q8NEQ5 155 aaPredicted RBP12.91□□□□□ -0.34
CCT4-201ENST00000394440 OR56B2PQ8NGI1 322 aa12.91□□□□□ -0.34
CCT4-201ENST00000394440 OR56B4Q8NH76 319 aa12.91□□□□□ -0.34
CCT4-201ENST00000394440 CPNE2Q96FN4 548 aaPredicted RBP12.91□□□□□ -0.34
CCT4-201ENST00000394440 TM2D1Q9BX74 207 aa12.91□□□□□ -0.34
CCT4-201ENST00000394440 C20orf85Q9H1P6 137 aa12.91□□□□□ -0.34
CCT4-201ENST00000394440 POFUT1Q9H488 388 aa12.91□□□□□ -0.34
CCT4-201ENST00000394440 OPA3Q9H6K4 179 aa12.91□□□□□ -0.34
CCT4-201ENST00000394440 NEK6Q9HC98 313 aa12.91□□□□□ -0.34
CCT4-201ENST00000394440 SOCS1O15524 211 aa12.91□□□□□ -0.34
CCT4-201ENST00000394440 WDR1O75083 606 aa12.91□□□□□ -0.34
CCT4-201ENST00000394440 DHFRP00374 187 aa12.91□□□□□ -0.34
CCT4-201ENST00000394440 AKAIN1P0CW23 69 aa12.91□□□□□ -0.34
CCT4-201ENST00000394440 HOXB1P14653 301 aaPredicted RBP12.91□□□□□ -0.34
CCT4-201ENST00000394440 MGMTP16455 207 aa12.91□□□□□ -0.34
CCT4-201ENST00000394440 FAUP35544 74 aaKnown RBP12.91□□□□□ -0.34
CCT4-201ENST00000394440 RBP2P50120 134 aa12.91□□□□□ -0.34
CCT4-201ENST00000394440 LINC00303Q3SY05 128 aa12.91□□□□□ -0.34
CCT4-201ENST00000394440 PLAC9Q5JTB6 97 aa12.91□□□□□ -0.34
CCT4-201ENST00000394440 MYPOPQ86VE0 399 aaPredicted RBP12.91□□□□□ -0.34
CCT4-201ENST00000394440 TMEM229BQ8NBD8 167 aa12.91□□□□□ -0.34
CCT4-201ENST00000394440 SLC30A7Q8NEW0 376 aa12.91□□□□□ -0.34
CCT4-201ENST00000394440 OR4D10Q8NGI6 311 aa12.91□□□□□ -0.34
CCT4-201ENST00000394440 STARD4Q96DR4 205 aa12.91□□□□□ -0.34
CCT4-201ENST00000394440 BORCS8Q96FH0 119 aa12.91□□□□□ -0.34
CCT4-201ENST00000394440 URM1Q9BTM9 101 aaKnown RBP12.91□□□□□ -0.34
CCT4-201ENST00000394440 SELENOIQ9C0D9 397 aa12.91□□□□□ -0.34
CCT4-201ENST00000394440 GHITMQ9H3K2 345 aa12.91□□□□□ -0.34
CCT4-201ENST00000394440 ING4Q9UNL4 249 aa12.91□□□□□ -0.34
CCT4-201ENST00000394440 KCNK7Q9Y2U2 307 aa12.91□□□□□ -0.34
CCT4-201ENST00000394440 IGF2RP11717 2491 aa12.9□□□□□ -0.34
CCT4-201ENST00000394440 ICMTO60725 284 aa12.9□□□□□ -0.34
CCT4-201ENST00000394440 H2AFB2P0C5Z0 115 aa12.9□□□□□ -0.34
CCT4-201ENST00000394440 GTF2F2P13984 249 aa12.9□□□□□ -0.34
CCT4-201ENST00000394440 MALLQ13021 153 aa12.9□□□□□ -0.34
CCT4-201ENST00000394440 KRTCAP3Q53RY4 240 aa12.9□□□□□ -0.34
CCT4-201ENST00000394440 RFPL4BQ6ZWI9 263 aa12.9□□□□□ -0.34
CCT4-201ENST00000394440 CHST4Q8NCG5 386 aa12.9□□□□□ -0.34
CCT4-201ENST00000394440 OR56B1Q8NGI3 324 aa12.9□□□□□ -0.34
CCT4-201ENST00000394440 ACTR6Q9GZN1 396 aa12.9□□□□□ -0.34
CCT4-201ENST00000394440 FAM230AA0A1W2PPH8 454 aa12.9□□□□□ -0.34
CCT4-201ENST00000394440 J3QW42 95 aa12.9□□□□□ -0.34
CCT4-201ENST00000394440 MFNGO00587 321 aa12.9□□□□□ -0.34
CCT4-201ENST00000394440 CD3DP04234 171 aa12.9□□□□□ -0.34
CCT4-201ENST00000394440 CRHP06850 196 aa12.9□□□□□ -0.34
CCT4-201ENST00000394440 GSTP1P09211 210 aaKnown RBP12.9□□□□□ -0.34
CCT4-201ENST00000394440 HIST1H1DP16402 221 aaKnown RBP12.9□□□□□ -0.34
CCT4-201ENST00000394440 GNB3P16520 340 aa12.9□□□□□ -0.34
CCT4-201ENST00000394440 PTGER4P35408 488 aa12.9□□□□□ -0.34
CCT4-201ENST00000394440 FUT6P51993 359 aa12.9□□□□□ -0.34
CCT4-201ENST00000394440 TAS2R19P59542 299 aa12.9□□□□□ -0.34
CCT4-201ENST00000394440 HLXQ14774 488 aaPredicted RBP12.9□□□□□ -0.34
CCT4-201ENST00000394440 FAM180AQ6UWF9 173 aa12.9□□□□□ -0.34
CCT4-201ENST00000394440 MRPL21Q7Z2W9 205 aaKnown RBP12.9□□□□□ -0.34
CCT4-201ENST00000394440 FJX1Q86VR8 437 aa12.9□□□□□ -0.34
CCT4-201ENST00000394440 Q8NA96 180 aa12.9□□□□□ -0.34
CCT4-201ENST00000394440 OR10K1Q8NGX5 313 aa12.9□□□□□ -0.34
CCT4-201ENST00000394440 PIGCQ92535 297 aa12.9□□□□□ -0.34
CCT4-201ENST00000394440 EXTL1Q92935 676 aa12.9□□□□□ -0.34
CCT4-201ENST00000394440 WBP1Q96G27 269 aa12.9□□□□□ -0.34
CCT4-201ENST00000394440 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.9□□□□□ -0.34
CCT4-201ENST00000394440 MCUBQ9NWR8 336 aa12.9□□□□□ -0.34
CCT4-201ENST00000394440 PTTG3PQ9NZH4 202 aa12.9□□□□□ -0.34
CCT4-201ENST00000394440 CRIM1Q9NZV1 1036 aa12.9□□□□□ -0.34
CCT4-201ENST00000394440 A0A0A6YYJ9 748 aa12.89□□□□□ -0.35
CCT4-201ENST00000394440 NDUFB6O95139 128 aa12.89□□□□□ -0.35
CCT4-201ENST00000394440 CD74P04233 296 aa12.89□□□□□ -0.35
CCT4-201ENST00000394440 TPOP07202 933 aa12.89□□□□□ -0.35
CCT4-201ENST00000394440 SERPINA2P20848 420 aa12.89□□□□□ -0.35
CCT4-201ENST00000394440 UBE2NP61088 152 aaKnown RBP12.89□□□□□ -0.35
CCT4-201ENST00000394440 PLCXD3Q63HM9 321 aa12.89□□□□□ -0.35
CCT4-201ENST00000394440 STEAP1BQ6NZ63 245 aa12.89□□□□□ -0.35
CCT4-201ENST00000394440 STEAP2Q8NFT2 490 aa12.89□□□□□ -0.35
CCT4-201ENST00000394440 NUDCD2Q8WVJ2 157 aa12.89□□□□□ -0.35
CCT4-201ENST00000394440 ATMQ13315 3056 aa12.89□□□□□ -0.35
CCT4-201ENST00000394440 RRP8O43159 456 aaKnown RBP12.89□□□□□ -0.35
CCT4-201ENST00000394440 SSX5O60225 188 aa12.89□□□□□ -0.35
CCT4-201ENST00000394440 CST4P01036 141 aa12.89□□□□□ -0.35
CCT4-201ENST00000394440 CELA3BP08861 270 aa12.89□□□□□ -0.35
CCT4-201ENST00000394440 EIF2B2P49770 351 aaKnown RBP12.89□□□□□ -0.35
CCT4-201ENST00000394440 MECP2P51608 486 aaKnown RBP12.89□□□□□ -0.35
CCT4-201ENST00000394440 TDGF1P3P51864 188 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms