RNA–Protein interactions for RNA: ENST00000394258.6

RCCD1-201, Transcript of RCC1 domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RCCD1, Length 2,689 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1-201ENST00000394258 KNTC1P50748 2209 aa17.15■□□□□ 0.34
RCCD1-201ENST00000394258 F5H0A9 414 aaPredicted RBP17.15■□□□□ 0.34
RCCD1-201ENST00000394258 NTN3O00634 580 aaPredicted RBP17.15■□□□□ 0.34
RCCD1-201ENST00000394258 ADAP1O75689 374 aa17.15■□□□□ 0.34
RCCD1-201ENST00000394258 PATE4P0C8F1 98 aa17.15■□□□□ 0.34
RCCD1-201ENST00000394258 PTGFRP43088 359 aa17.15■□□□□ 0.34
RCCD1-201ENST00000394258 GUCA2BQ16661 112 aa17.15■□□□□ 0.34
RCCD1-201ENST00000394258 ZC3HAV1Q7Z2W4 902 aaKnown RBP17.15■□□□□ 0.34
RCCD1-201ENST00000394258 ZIC4Q8N9L1 334 aa17.15■□□□□ 0.34
RCCD1-201ENST00000394258 TERB2Q8NHR7 220 aa17.15■□□□□ 0.34
RCCD1-201ENST00000394258 THAP6Q8TBB0 222 aa17.15■□□□□ 0.34
RCCD1-201ENST00000394258 FBXO17Q96EF6 278 aa17.15■□□□□ 0.34
RCCD1-201ENST00000394258 OR10A2Q9H208 303 aa17.15■□□□□ 0.34
RCCD1-201ENST00000394258 C5orf66Q9H5L9 145 aa17.15■□□□□ 0.34
RCCD1-201ENST00000394258 COLQQ9Y215 455 aaPredicted RBP17.15■□□□□ 0.34
RCCD1-201ENST00000394258 NCOR1O75376 2440 aa17.15■□□□□ 0.34
RCCD1-201ENST00000394258 EIF1BO60739 113 aaKnown RBP17.14■□□□□ 0.34
RCCD1-201ENST00000394258 BLVRBP30043 206 aaPredicted RBP17.14■□□□□ 0.34
RCCD1-201ENST00000394258 FOLR3P41439 243 aa17.14■□□□□ 0.34
RCCD1-201ENST00000394258 ZFP36L1Q07352 338 aaKnown RBP17.14■□□□□ 0.34
RCCD1-201ENST00000394258 SNAI3Q3KNW1 292 aa17.14■□□□□ 0.34
RCCD1-201ENST00000394258 IGSF11Q5DX21 431 aa17.14■□□□□ 0.34
RCCD1-201ENST00000394258 CRIP3Q6Q6R5 217 aa17.14■□□□□ 0.34
RCCD1-201ENST00000394258 UBALD2Q8IYN6 164 aa17.14■□□□□ 0.34
RCCD1-201ENST00000394258 TMEM123Q8N131 208 aa17.14■□□□□ 0.34
RCCD1-201ENST00000394258 PNLDC1Q8NA58 520 aaKnown RBP17.14■□□□□ 0.34
RCCD1-201ENST00000394258 OR2AE1Q8NHA4 323 aa17.14■□□□□ 0.34
RCCD1-201ENST00000394258 TMEM230Q96A57 120 aa17.14■□□□□ 0.34
RCCD1-201ENST00000394258 URM1Q9BTM9 101 aaKnown RBP17.14■□□□□ 0.34
RCCD1-201ENST00000394258 CCDC163A0A0D9SF12 145 aa17.14■□□□□ 0.33
RCCD1-201ENST00000394258 ABCD4O14678 606 aa17.14■□□□□ 0.33
RCCD1-201ENST00000394258 DUS4LO95620 317 aaKnown RBP17.14■□□□□ 0.33
RCCD1-201ENST00000394258 HLA-GP17693 338 aa17.14■□□□□ 0.33
RCCD1-201ENST00000394258 GSK3AP49840 483 aa17.14■□□□□ 0.33
RCCD1-201ENST00000394258 OR56B1Q8NGI3 324 aa17.14■□□□□ 0.33
RCCD1-201ENST00000394258 M1APQ8TC57 530 aa17.14■□□□□ 0.33
RCCD1-201ENST00000394258 TMEM54Q969K7 222 aa17.14■□□□□ 0.33
RCCD1-201ENST00000394258 TSNAXQ99598 290 aaKnown RBP17.14■□□□□ 0.33
RCCD1-201ENST00000394258 NAA11Q9BSU3 229 aaPredicted RBP17.14■□□□□ 0.33
RCCD1-201ENST00000394258 DNTTIP1Q9H147 329 aa17.14■□□□□ 0.33
RCCD1-201ENST00000394258 CSAG2Q9Y5P2 127 aa17.14■□□□□ 0.33
RCCD1-201ENST00000394258 M0R135 149 aa17.14■□□□□ 0.33
RCCD1-201ENST00000394258 LAMTOR5O43504 91 aa17.14■□□□□ 0.33
RCCD1-201ENST00000394258 GSTP1P09211 210 aaKnown RBP17.14■□□□□ 0.33
RCCD1-201ENST00000394258 PGAM2P15259 253 aa17.14■□□□□ 0.33
RCCD1-201ENST00000394258 NTF4P34130 210 aa17.14■□□□□ 0.33
RCCD1-201ENST00000394258 MLF1P58340 268 aa17.14■□□□□ 0.33
RCCD1-201ENST00000394258 ECH1Q13011 328 aa17.14■□□□□ 0.33
RCCD1-201ENST00000394258 ZNF345Q14585 488 aa17.14■□□□□ 0.33
RCCD1-201ENST00000394258 MOB3CQ70IA8 216 aa17.14■□□□□ 0.33
RCCD1-201ENST00000394258 EIF4E3Q8N5X7 224 aaKnown RBP17.14■□□□□ 0.33
RCCD1-201ENST00000394258 NAXEQ8NCW5 288 aa17.14■□□□□ 0.33
RCCD1-201ENST00000394258 ZNF799Q96GE5 643 aa17.14■□□□□ 0.33
RCCD1-201ENST00000394258 KLF2Q9Y5W3 355 aaPredicted RBP17.14■□□□□ 0.33
RCCD1-201ENST00000394258 AMY2BP19961 511 aa17.13■□□□□ 0.33
RCCD1-201ENST00000394258 CSNK2A1P68400 391 aaPredicted RBP17.13■□□□□ 0.33
RCCD1-201ENST00000394258 C10orf128Q5T292 105 aa17.13■□□□□ 0.33
RCCD1-201ENST00000394258 WDR5BQ86VZ2 330 aa17.13■□□□□ 0.33
RCCD1-201ENST00000394258 PUSL1Q8N0Z8 303 aaKnown RBP17.13■□□□□ 0.33
RCCD1-201ENST00000394258 OR14L1PQ8NHC6 308 aa17.13■□□□□ 0.33
RCCD1-201ENST00000394258 CMSS1Q9BQ75 279 aaKnown RBP17.13■□□□□ 0.33
RCCD1-201ENST00000394258 CHMP1AQ9HD42 196 aaPredicted RBP17.13■□□□□ 0.33
RCCD1-201ENST00000394258 FAM186AA6NE01 2351 aa17.13■□□□□ 0.33
RCCD1-201ENST00000394258 PMS2P1A4D2B8 440 aa17.13■□□□□ 0.33
RCCD1-201ENST00000394258 DBX1A6NMT0 343 aa17.13■□□□□ 0.33
RCCD1-201ENST00000394258 MFNGO00587 321 aa17.13■□□□□ 0.33
RCCD1-201ENST00000394258 CBR3O75828 277 aa17.13■□□□□ 0.33
RCCD1-201ENST00000394258 DHRS3O75911 302 aa17.13■□□□□ 0.33
RCCD1-201ENST00000394258 RFPL3SP0C7P2 107 aa17.13■□□□□ 0.33
RCCD1-201ENST00000394258 RIPPLY1Q0D2K3 151 aa17.13■□□□□ 0.33
RCCD1-201ENST00000394258 HAGHLQ6PII5 290 aaPredicted RBP17.13■□□□□ 0.33
RCCD1-201ENST00000394258 MAML2Q8IZL2 1156 aaPredicted RBP17.13■□□□□ 0.33
RCCD1-201ENST00000394258 OR5H2Q8NGV7 314 aa17.13■□□□□ 0.33
RCCD1-201ENST00000394258 RRNAD1Q96FB5 475 aaKnown RBP17.13■□□□□ 0.33
RCCD1-201ENST00000394258 H0YIZ8 118 aa17.12■□□□□ 0.33
RCCD1-201ENST00000394258 CRHP06850 196 aa17.12■□□□□ 0.33
RCCD1-201ENST00000394258 NR2C1P13056 603 aa17.12■□□□□ 0.33
RCCD1-201ENST00000394258 KCNJ3P48549 501 aa17.12■□□□□ 0.33
RCCD1-201ENST00000394258 RAC1P63000 192 aa17.12■□□□□ 0.33
RCCD1-201ENST00000394258 LDLRAD3Q86YD5 345 aa17.12■□□□□ 0.33
RCCD1-201ENST00000394258 INO80EQ8NBZ0 244 aaPredicted RBP17.12■□□□□ 0.33
RCCD1-201ENST00000394258 SSC4DQ8WTU2 575 aa17.12■□□□□ 0.33
RCCD1-201ENST00000394258 DCUN1D4Q92564 292 aa17.12■□□□□ 0.33
RCCD1-201ENST00000394258 S100A13Q99584 98 aa17.12■□□□□ 0.33
RCCD1-201ENST00000394258 F8W036 122 aa17.12■□□□□ 0.33
RCCD1-201ENST00000394258 TRAPPC6AO75865 159 aa17.12■□□□□ 0.33
RCCD1-201ENST00000394258 VAMP5O95183 116 aa17.12■□□□□ 0.33
RCCD1-201ENST00000394258 PSMB6P28072 239 aa17.12■□□□□ 0.33
RCCD1-201ENST00000394258 OR3A2P47893 321 aa17.12■□□□□ 0.33
RCCD1-201ENST00000394258 HOXA1P49639 335 aaPredicted RBP17.12■□□□□ 0.33
RCCD1-201ENST00000394258 SNU13P55769 128 aaKnown RBP17.12■□□□□ 0.33
RCCD1-201ENST00000394258 CHAF1BQ13112 559 aa17.12■□□□□ 0.33
RCCD1-201ENST00000394258 CSNK2A3Q8NEV1 391 aa17.12■□□□□ 0.33
RCCD1-201ENST00000394258 ALKBH3Q96Q83 286 aaPredicted RBP17.12■□□□□ 0.33
RCCD1-201ENST00000394258 PIGQQ9BRB3 760 aa17.12■□□□□ 0.33
RCCD1-201ENST00000394258 RNF126Q9BV68 326 aa17.12■□□□□ 0.33
RCCD1-201ENST00000394258 CRLF2Q9HC73 371 aa17.12■□□□□ 0.33
RCCD1-201ENST00000394258 SH2D2AQ9NP31 389 aa17.12■□□□□ 0.33
RCCD1-201ENST00000394258 GPR173Q9NS66 373 aa17.12■□□□□ 0.33
RCCD1-201ENST00000394258 GPR132Q9UNW8 380 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms