RNA–Protein interactions for RNA: ENST00000393408.7

CBX1-202, Transcript of chromobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX1, Length 2,422 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1-202ENST00000393408 DHRS7BQ6IAN0 325 aaPredicted RBP16.54■□□□□ 0.24
CBX1-202ENST00000393408 LCN10Q6JVE6 187 aa16.54■□□□□ 0.24
CBX1-202ENST00000393408 H3F3CQ6NXT2 135 aa16.54■□□□□ 0.24
CBX1-202ENST00000393408 SLC16A14Q7RTX9 510 aa16.54■□□□□ 0.24
CBX1-202ENST00000393408 ZNF775Q96BV0 537 aaPredicted RBP16.54■□□□□ 0.24
CBX1-202ENST00000393408 TMEM231Q9H6L2 316 aa16.54■□□□□ 0.24
CBX1-202ENST00000393408 OR2S2Q9NQN1 319 aa16.54■□□□□ 0.24
CBX1-202ENST00000393408 SDK1Q7Z5N4 2213 aa16.53■□□□□ 0.24
CBX1-202ENST00000393408 A0A0U1RQV5 110 aa16.53■□□□□ 0.24
CBX1-202ENST00000393408 SERPINE3A8MV23 424 aa16.53■□□□□ 0.24
CBX1-202ENST00000393408 DHRS3O75911 302 aa16.53■□□□□ 0.24
CBX1-202ENST00000393408 HOXB5P09067 269 aa16.53■□□□□ 0.24
CBX1-202ENST00000393408 CHRFAM7AQ494W8 412 aa16.53■□□□□ 0.24
CBX1-202ENST00000393408 CBLN2Q8IUK8 224 aa16.53■□□□□ 0.24
CBX1-202ENST00000393408 LINC00518Q8N0U6 118 aa16.53■□□□□ 0.24
CBX1-202ENST00000393408 SAT2Q96F10 170 aaPredicted RBP16.53■□□□□ 0.24
CBX1-202ENST00000393408 TREM1Q9NP99 234 aa16.53■□□□□ 0.24
CBX1-202ENST00000393408 UQCC1Q9NVA1 299 aa16.53■□□□□ 0.24
CBX1-202ENST00000393408 KLF2Q9Y5W3 355 aaPredicted RBP16.53■□□□□ 0.24
CBX1-202ENST00000393408 MYO7BQ6PIF6 2116 aa16.53■□□□□ 0.24
CBX1-202ENST00000393408 FAHP16930 419 aa16.53■□□□□ 0.24
CBX1-202ENST00000393408 FKBP2P26885 142 aaKnown RBP16.53■□□□□ 0.24
CBX1-202ENST00000393408 PTGER4P35408 488 aa16.53■□□□□ 0.24
CBX1-202ENST00000393408 ZNF84P51523 738 aa16.53■□□□□ 0.24
CBX1-202ENST00000393408 ENDOGQ14249 297 aaKnown RBP16.53■□□□□ 0.24
CBX1-202ENST00000393408 PHYHD1Q5SRE7 291 aa16.53■□□□□ 0.24
CBX1-202ENST00000393408 SMIM8Q96KF7 97 aa16.53■□□□□ 0.24
CBX1-202ENST00000393408 NECAB3Q96P71 396 aaPredicted RBP16.53■□□□□ 0.24
CBX1-202ENST00000393408 SEC11CQ9BY50 192 aa16.53■□□□□ 0.24
CBX1-202ENST00000393408 DEFB126Q9BYW3 111 aa16.53■□□□□ 0.24
CBX1-202ENST00000393408 GSKIPQ9P0R6 139 aa16.53■□□□□ 0.24
CBX1-202ENST00000393408 RARRES3Q9UL19 164 aa16.53■□□□□ 0.24
CBX1-202ENST00000393408 F5H5K5 113 aa16.52■□□□□ 0.24
CBX1-202ENST00000393408 CA11O75493 328 aa16.52■□□□□ 0.24
CBX1-202ENST00000393408 ONECUT2O95948 504 aa16.52■□□□□ 0.24
CBX1-202ENST00000393408 FCGR2AP12318 317 aa16.52■□□□□ 0.24
CBX1-202ENST00000393408 S100A10P60903 97 aa16.52■□□□□ 0.24
CBX1-202ENST00000393408 C10orf128Q5T292 105 aa16.52■□□□□ 0.24
CBX1-202ENST00000393408 GJC3Q8NFK1 279 aa16.52■□□□□ 0.24
CBX1-202ENST00000393408 PHF7Q9BWX1 381 aaPredicted RBP16.52■□□□□ 0.24
CBX1-202ENST00000393408 CHST5Q9GZS9 411 aa16.52■□□□□ 0.24
CBX1-202ENST00000393408 NELFAQ9H3P2 528 aa16.52■□□□□ 0.24
CBX1-202ENST00000393408 SAV1Q9H4B6 383 aaPredicted RBP16.52■□□□□ 0.24
CBX1-202ENST00000393408 CHCHD2Q9Y6H1 151 aaPredicted RBP16.52■□□□□ 0.24
CBX1-202ENST00000393408 IGKV1D-8A0A087WSZ0 117 aa16.51■□□□□ 0.23
CBX1-202ENST00000393408 OR5H15A6NDH6 313 aa16.51■□□□□ 0.23
CBX1-202ENST00000393408 F12P00748 615 aaPredicted RBP16.51■□□□□ 0.23
CBX1-202ENST00000393408 NR2C1P13056 603 aa16.51■□□□□ 0.23
CBX1-202ENST00000393408 CSNK1A1P48729 337 aa16.51■□□□□ 0.23
CBX1-202ENST00000393408 PRAMEF20Q5VT98 475 aa16.51■□□□□ 0.23
CBX1-202ENST00000393408 Q6ZSR3 168 aa16.51■□□□□ 0.23
CBX1-202ENST00000393408 SPAG16Q8N0X2 631 aa16.51■□□□□ 0.23
CBX1-202ENST00000393408 PP6455Q8WZ26 134 aa16.51■□□□□ 0.23
CBX1-202ENST00000393408 ACKR4Q9NPB9 350 aa16.51■□□□□ 0.23
CBX1-202ENST00000393408 C14orf166Q9Y224 244 aaKnown RBP16.51■□□□□ 0.23
CBX1-202ENST00000393408 MEMO1Q9Y316 297 aa16.51■□□□□ 0.23
CBX1-202ENST00000393408 SNAPINO95295 136 aa16.51■□□□□ 0.23
CBX1-202ENST00000393408 KNG1P01042 644 aa16.51■□□□□ 0.23
CBX1-202ENST00000393408 CPT2P23786 658 aa16.51■□□□□ 0.23
CBX1-202ENST00000393408 H3F3AP84243 136 aa16.51■□□□□ 0.23
CBX1-202ENST00000393408 ARL6IP1Q15041 203 aa16.51■□□□□ 0.23
CBX1-202ENST00000393408 RSPO1Q2MKA7 263 aaPredicted RBP16.51■□□□□ 0.23
CBX1-202ENST00000393408 RPL7L1Q6DKI1 246 aaKnown RBP16.51■□□□□ 0.23
CBX1-202ENST00000393408 FOXL2NBQ6ZUU3 175 aa16.51■□□□□ 0.23
CBX1-202ENST00000393408 HAS2Q92819 552 aa16.51■□□□□ 0.23
CBX1-202ENST00000393408 TMEM54Q969K7 222 aa16.51■□□□□ 0.23
CBX1-202ENST00000393408 NABP1Q96AH0 204 aa16.51■□□□□ 0.23
CBX1-202ENST00000393408 SHDQ96IW2 340 aa16.51■□□□□ 0.23
CBX1-202ENST00000393408 HRH4Q9H3N8 390 aa16.51■□□□□ 0.23
CBX1-202ENST00000393408 C19orf25Q9UFG5 118 aaPredicted RBP16.51■□□□□ 0.23
CBX1-202ENST00000393408 ZNF175Q9Y473 711 aa16.51■□□□□ 0.23
CBX1-202ENST00000393408 TAAR5O14804 337 aa16.5■□□□□ 0.23
CBX1-202ENST00000393408 IFNA2P01563 188 aa16.5■□□□□ 0.23
CBX1-202ENST00000393408 SFTPBP07988 381 aa16.5■□□□□ 0.23
CBX1-202ENST00000393408 HKR1P10072 659 aa16.5■□□□□ 0.23
CBX1-202ENST00000393408 PRKACAP17612 351 aa16.5■□□□□ 0.23
CBX1-202ENST00000393408 PVALBP20472 110 aaPredicted RBP16.5■□□□□ 0.23
CBX1-202ENST00000393408 GUCA1AP43080 201 aaPredicted RBP16.5■□□□□ 0.23
CBX1-202ENST00000393408 NPBWR1P48145 328 aa16.5■□□□□ 0.23
CBX1-202ENST00000393408 EIF5AP63241 154 aaKnown RBP16.5■□□□□ 0.23
CBX1-202ENST00000393408 RBM39Q14498 530 aaKnown RBP16.5■□□□□ 0.23
CBX1-202ENST00000393408 PPA1Q15181 289 aa16.5■□□□□ 0.23
CBX1-202ENST00000393408 RHOFQ9HBH0 211 aa16.5■□□□□ 0.23
CBX1-202ENST00000393408 MCTS1Q9ULC4 181 aaKnown RBP16.5■□□□□ 0.23
CBX1-202ENST00000393408 FAM96BQ9Y3D0 163 aa16.5■□□□□ 0.23
CBX1-202ENST00000393408 A0A1W2PQM1 296 aa16.5■□□□□ 0.23
CBX1-202ENST00000393408 LRP3O75074 770 aa16.5■□□□□ 0.23
CBX1-202ENST00000393408 ZNF708P17019 499 aa16.5■□□□□ 0.23
CBX1-202ENST00000393408 ZNF133P52736 654 aaPredicted RBP16.5■□□□□ 0.23
CBX1-202ENST00000393408 HIST1H3AP68431 136 aa16.5■□□□□ 0.23
CBX1-202ENST00000393408 HIST2H3PS2Q5TEC6 136 aa16.5■□□□□ 0.23
CBX1-202ENST00000393408 GUSBP11Q6P575 273 aa16.5■□□□□ 0.23
CBX1-202ENST00000393408 HIST2H3AQ71DI3 136 aa16.5■□□□□ 0.23
CBX1-202ENST00000393408 PIGTQ969N2 578 aa16.5■□□□□ 0.23
CBX1-202ENST00000393408 S100A13Q99584 98 aa16.5■□□□□ 0.23
CBX1-202ENST00000393408 NRIP2Q9BQI9 281 aa16.5■□□□□ 0.23
CBX1-202ENST00000393408 CNTNAP3Q9BZ76 1288 aa16.5■□□□□ 0.23
CBX1-202ENST00000393408 ZNF701Q9NV72 531 aaPredicted RBP16.5■□□□□ 0.23
CBX1-202ENST00000393408 C1orf123Q9NWV4 160 aa16.5■□□□□ 0.23
CBX1-202ENST00000393408 PIGLQ9Y2B2 252 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms