RNA–Protein interactions for RNA: ENST00000393368.2

HMGB3P1-201, Transcript of high mobility group box 3 pseudogene 1, humanhuman

BASIC

Gene HMGB3P1, Length 573 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P1-201ENST00000393368 FOXH1O75593 365 aa6.39□□□□□ -1.39
HMGB3P1-201ENST00000393368 DHRS3O75911 302 aa6.39□□□□□ -1.39
HMGB3P1-201ENST00000393368 LHBP01229 141 aa6.39□□□□□ -1.39
HMGB3P1-201ENST00000393368 GNAO1P09471 354 aa6.39□□□□□ -1.39
HMGB3P1-201ENST00000393368 SELLP14151 372 aa6.39□□□□□ -1.39
HMGB3P1-201ENST00000393368 ZNF19P17023 458 aa6.39□□□□□ -1.39
HMGB3P1-201ENST00000393368 PITPNBP48739 271 aa6.39□□□□□ -1.39
HMGB3P1-201ENST00000393368 ISL1P61371 349 aa6.39□□□□□ -1.39
HMGB3P1-201ENST00000393368 GNB2P62879 340 aa6.39□□□□□ -1.39
HMGB3P1-201ENST00000393368 GUCA2AQ02747 115 aa6.39□□□□□ -1.39
HMGB3P1-201ENST00000393368 GABPB1Q06547 395 aaPredicted RBP6.39□□□□□ -1.39
HMGB3P1-201ENST00000393368 MZT1Q08AG7 82 aa6.39□□□□□ -1.39
HMGB3P1-201ENST00000393368 KRTAP21-3Q3LHN1 58 aa6.39□□□□□ -1.39
HMGB3P1-201ENST00000393368 CDONQ4KMG0 1287 aa6.39□□□□□ -1.39
HMGB3P1-201ENST00000393368 ZNF691Q5VV52 312 aa6.39□□□□□ -1.39
HMGB3P1-201ENST00000393368 ZNF841Q6ZN19 808 aa6.39□□□□□ -1.39
HMGB3P1-201ENST00000393368 DCDC5Q6ZRR9 648 aa6.39□□□□□ -1.39
HMGB3P1-201ENST00000393368 FTMTQ8N4E7 242 aa6.39□□□□□ -1.39
HMGB3P1-201ENST00000393368 FAM216BQ8N7L0 139 aa6.39□□□□□ -1.39
HMGB3P1-201ENST00000393368 PLPP7Q8NBV4 271 aa6.39□□□□□ -1.39
HMGB3P1-201ENST00000393368 ZNF555Q8NEP9 628 aa6.39□□□□□ -1.39
HMGB3P1-201ENST00000393368 OR5T2Q8NGG2 359 aa6.39□□□□□ -1.39
HMGB3P1-201ENST00000393368 OR8B3Q8NGG8 313 aa6.39□□□□□ -1.39
HMGB3P1-201ENST00000393368 OR52I1Q8NGK6 324 aa6.39□□□□□ -1.39
HMGB3P1-201ENST00000393368 OR10AC1Q8NH08 325 aa6.39□□□□□ -1.39
HMGB3P1-201ENST00000393368 TRMT10AQ8TBZ6 339 aaKnown RBP6.39□□□□□ -1.39
HMGB3P1-201ENST00000393368 NPRL2Q8WTW4 380 aa6.39□□□□□ -1.39
HMGB3P1-201ENST00000393368 C22orf15Q8WYQ4 148 aa6.39□□□□□ -1.39
HMGB3P1-201ENST00000393368 NEIL1Q96FI4 390 aaPredicted RBP6.39□□□□□ -1.39
HMGB3P1-201ENST00000393368 C4orf36Q96KX1 117 aa6.39□□□□□ -1.39
HMGB3P1-201ENST00000393368 ZNF488Q96MN9 340 aa6.39□□□□□ -1.39
HMGB3P1-201ENST00000393368 TECTBQ96PL2 329 aa6.39□□□□□ -1.39
HMGB3P1-201ENST00000393368 OR8B2Q96RD0 313 aa6.39□□□□□ -1.39
HMGB3P1-201ENST00000393368 CCL13Q99616 98 aa6.39□□□□□ -1.39
HMGB3P1-201ENST00000393368 ALG8Q9BVK2 526 aa6.39□□□□□ -1.39
HMGB3P1-201ENST00000393368 TLNRD1Q9H1K6 362 aa6.39□□□□□ -1.39
HMGB3P1-201ENST00000393368 C7orf69Q9H7B7 122 aa6.39□□□□□ -1.39
HMGB3P1-201ENST00000393368 OR5V1Q9UGF6 321 aa6.39□□□□□ -1.39
HMGB3P1-201ENST00000393368 ENPP5Q9UJA9 477 aa6.39□□□□□ -1.39
HMGB3P1-201ENST00000393368 ZNF391Q9UJN7 358 aa6.39□□□□□ -1.39
HMGB3P1-201ENST00000393368 EXOGQ9Y2C4 368 aaKnown RBP6.39□□□□□ -1.39
HMGB3P1-201ENST00000393368 V9GYS6 101 aa6.39□□□□□ -1.39
HMGB3P1-201ENST00000393368 MALRD1Q5VYJ5 2156 aa6.39□□□□□ -1.39
HMGB3P1-201ENST00000393368 JMJD1CQ15652 2540 aa6.39□□□□□ -1.39
HMGB3P1-201ENST00000393368 TRAV38-1A0A0B4J264 116 aa6.38□□□□□ -1.39
HMGB3P1-201ENST00000393368 A0A1B0GVI7 797 aa6.38□□□□□ -1.39
HMGB3P1-201ENST00000393368 TMEM210A6NLX4 147 aa6.38□□□□□ -1.39
HMGB3P1-201ENST00000393368 A8MXK9 166 aa6.38□□□□□ -1.39
HMGB3P1-201ENST00000393368 C22orf46C9J442 243 aa6.38□□□□□ -1.39
HMGB3P1-201ENST00000393368 E9PI62 339 aa6.38□□□□□ -1.39
HMGB3P1-201ENST00000393368 TNFRSF13BO14836 293 aaPredicted RBP6.38□□□□□ -1.39
HMGB3P1-201ENST00000393368 TMPRSS2O15393 492 aa6.38□□□□□ -1.39
HMGB3P1-201ENST00000393368 SYNGR1O43759 233 aa6.38□□□□□ -1.39
HMGB3P1-201ENST00000393368 SULT1C4O75897 302 aa6.38□□□□□ -1.39
HMGB3P1-201ENST00000393368 NRASP01111 189 aa6.38□□□□□ -1.39
HMGB3P1-201ENST00000393368 ZNF12P17014 697 aa6.38□□□□□ -1.39
HMGB3P1-201ENST00000393368 AMY2BP19961 511 aa6.38□□□□□ -1.39
HMGB3P1-201ENST00000393368 PCMT1P22061 227 aa6.38□□□□□ -1.39
HMGB3P1-201ENST00000393368 CCL1P22362 96 aa6.38□□□□□ -1.39
HMGB3P1-201ENST00000393368 ACTC1P68032 377 aa6.38□□□□□ -1.39
HMGB3P1-201ENST00000393368 ACTA1P68133 377 aa6.38□□□□□ -1.39
HMGB3P1-201ENST00000393368 ADARB1P78563 741 aaKnown RBP6.38□□□□□ -1.39
HMGB3P1-201ENST00000393368 PRR20EP86478 221 aa6.38□□□□□ -1.39
HMGB3P1-201ENST00000393368 PRR20CP86479 221 aa6.38□□□□□ -1.39
HMGB3P1-201ENST00000393368 PRR20DP86480 221 aa6.38□□□□□ -1.39
HMGB3P1-201ENST00000393368 PRR20BP86481 221 aa6.38□□□□□ -1.39
HMGB3P1-201ENST00000393368 PRR20AP86496 221 aa6.38□□□□□ -1.39
HMGB3P1-201ENST00000393368 PAX2Q02962 417 aa6.38□□□□□ -1.39
HMGB3P1-201ENST00000393368 IKZF1Q13422 519 aa6.38□□□□□ -1.39
HMGB3P1-201ENST00000393368 SNCBQ16143 134 aa6.38□□□□□ -1.39
HMGB3P1-201ENST00000393368 CEACAM21Q3KPI0 293 aa6.38□□□□□ -1.39
HMGB3P1-201ENST00000393368 OGFRL1Q5TC84 451 aaPredicted RBP6.38□□□□□ -1.39
HMGB3P1-201ENST00000393368 TEX36Q5VZQ5 186 aa6.38□□□□□ -1.39
HMGB3P1-201ENST00000393368 WDR25Q64LD2 544 aaPredicted RBP6.38□□□□□ -1.39
HMGB3P1-201ENST00000393368 HAGHLQ6PII5 290 aaPredicted RBP6.38□□□□□ -1.39
HMGB3P1-201ENST00000393368 DOK3Q7L591 496 aa6.38□□□□□ -1.39
HMGB3P1-201ENST00000393368 NLRC3Q7RTR2 1065 aa6.38□□□□□ -1.39
HMGB3P1-201ENST00000393368 ACBD7Q8N6N7 88 aa6.38□□□□□ -1.39
HMGB3P1-201ENST00000393368 OR2G2Q8NGZ5 317 aa6.38□□□□□ -1.39
HMGB3P1-201ENST00000393368 NRG4Q8WWG1 115 aa6.38□□□□□ -1.39
HMGB3P1-201ENST00000393368 PELI1Q96FA3 418 aa6.38□□□□□ -1.39
HMGB3P1-201ENST00000393368 Q96MT0 163 aa6.38□□□□□ -1.39
HMGB3P1-201ENST00000393368 RDH12Q96NR8 316 aa6.38□□□□□ -1.39
HMGB3P1-201ENST00000393368 HIST1H2AAQ96QV6 131 aa6.38□□□□□ -1.39
HMGB3P1-201ENST00000393368 ZNF649Q9BS31 505 aa6.38□□□□□ -1.39
HMGB3P1-201ENST00000393368 ADI1Q9BV57 179 aa6.38□□□□□ -1.39
HMGB3P1-201ENST00000393368 OR51I2Q9H344 312 aa6.38□□□□□ -1.39
HMGB3P1-201ENST00000393368 PLEKHA1Q9HB21 404 aa6.38□□□□□ -1.39
HMGB3P1-201ENST00000393368 ERVK13-1Q9NX77 482 aa6.38□□□□□ -1.39
HMGB3P1-201ENST00000393368 FRRS1LQ9P0K9 344 aa6.38□□□□□ -1.39
HMGB3P1-201ENST00000393368 CLN8Q9UBY8 286 aa6.38□□□□□ -1.39
HMGB3P1-201ENST00000393368 MIOXQ9UGB7 285 aa6.38□□□□□ -1.39
HMGB3P1-201ENST00000393368 LRCH1Q9Y2L9 728 aa6.38□□□□□ -1.39
HMGB3P1-201ENST00000393368 INSIG2Q9Y5U4 225 aa6.38□□□□□ -1.39
HMGB3P1-201ENST00000393368 SOX21Q9Y651 276 aaPredicted RBP6.38□□□□□ -1.39
HMGB3P1-201ENST00000393368 ANK2Q01484 3957 aa6.37□□□□□ -1.39
HMGB3P1-201ENST00000393368 IGHV2-70DA0A0C4DH43 119 aa6.37□□□□□ -1.39
HMGB3P1-201ENST00000393368 FAM230AA0A1W2PPH8 454 aa6.37□□□□□ -1.39
HMGB3P1-201ENST00000393368 ANKRD61A6NGH8 418 aa6.37□□□□□ -1.39
HMGB3P1-201ENST00000393368 SNTNA6NMZ2 147 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms