RNA–Protein interactions for RNA: ENST00000383836.7

SRGAP3-202, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRGAP3, Length 8,656 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-202ENST00000383836 CYC1P08574 325 aa11.23□□□□□ -0.61
SRGAP3-202ENST00000383836 TMEM267Q0VDI3 215 aaPredicted RBP11.23□□□□□ -0.61
SRGAP3-202ENST00000383836 OR2B11Q5JQS5 317 aa11.23□□□□□ -0.61
SRGAP3-202ENST00000383836 TSEN54Q7Z6J9 526 aaKnown RBP11.23□□□□□ -0.61
SRGAP3-202ENST00000383836 ABI3BPQ7Z7G0 1075 aa11.23□□□□□ -0.61
SRGAP3-202ENST00000383836 ARIH2OSQ8N7S6 290 aa11.23□□□□□ -0.61
SRGAP3-202ENST00000383836 LSM2Q9Y333 95 aaKnown RBP11.23□□□□□ -0.61
SRGAP3-202ENST00000383836 FIGNL2A6NMB9 653 aa11.22□□□□□ -0.61
SRGAP3-202ENST00000383836 TMPRSS11FQ6ZWK6 438 aa11.22□□□□□ -0.61
SRGAP3-202ENST00000383836 MYPOPQ86VE0 399 aaPredicted RBP11.22□□□□□ -0.61
SRGAP3-202ENST00000383836 ZNF740Q8NDX6 193 aa11.22□□□□□ -0.61
SRGAP3-202ENST00000383836 STARD4Q96DR4 205 aa11.22□□□□□ -0.61
SRGAP3-202ENST00000383836 SPACA5Q96QH8 159 aa11.22□□□□□ -0.61
SRGAP3-202ENST00000383836 PBOV1Q9GZY1 135 aa11.22□□□□□ -0.61
SRGAP3-202ENST00000383836 LIM2P55344 173 aa11.22□□□□□ -0.61
SRGAP3-202ENST00000383836 FOXO1Q12778 655 aa11.22□□□□□ -0.61
SRGAP3-202ENST00000383836 KHDC1LQ5JSQ8 128 aa11.22□□□□□ -0.61
SRGAP3-202ENST00000383836 FAM78BQ5VT40 261 aa11.22□□□□□ -0.61
SRGAP3-202ENST00000383836 WDR74Q6RFH5 385 aaPredicted RBP11.22□□□□□ -0.61
SRGAP3-202ENST00000383836 SEZ6L2Q6UXD5 910 aa11.22□□□□□ -0.61
SRGAP3-202ENST00000383836 ZNF346Q9UL40 294 aaKnown RBP11.22□□□□□ -0.61
SRGAP3-202ENST00000383836 GPANK1O95872 356 aa11.22□□□□□ -0.61
SRGAP3-202ENST00000383836 INHBBP09529 407 aa11.22□□□□□ -0.61
SRGAP3-202ENST00000383836 CD1CP29017 333 aa11.22□□□□□ -0.61
SRGAP3-202ENST00000383836 CHRNA7P36544 502 aa11.22□□□□□ -0.61
SRGAP3-202ENST00000383836 CSNK1G2P78368 415 aa11.22□□□□□ -0.61
SRGAP3-202ENST00000383836 ELAVL1Q15717 326 aaKnown RBP11.22□□□□□ -0.61
SRGAP3-202ENST00000383836 NSUN5P2Q63ZY6 315 aa11.22□□□□□ -0.61
SRGAP3-202ENST00000383836 SLC26A10Q8NG04 563 aa11.22□□□□□ -0.61
SRGAP3-202ENST00000383836 ZNF775Q96BV0 537 aaPredicted RBP11.22□□□□□ -0.61
SRGAP3-202ENST00000383836 HCFC1P51610 2035 aa11.22□□□□□ -0.61
SRGAP3-202ENST00000383836 TCRBV5S1A1TA0A578 114 aa11.22□□□□□ -0.61
SRGAP3-202ENST00000383836 FAM24AA6NFZ4 105 aa11.22□□□□□ -0.61
SRGAP3-202ENST00000383836 OR4A47Q6IF82 309 aa11.22□□□□□ -0.61
SRGAP3-202ENST00000383836 MUCL1Q96DR8 90 aa11.22□□□□□ -0.61
SRGAP3-202ENST00000383836 RTL8AQ9BWD3 113 aa11.22□□□□□ -0.61
SRGAP3-202ENST00000383836 MS4A7Q9GZW8 240 aaPredicted RBP11.22□□□□□ -0.61
SRGAP3-202ENST00000383836 SEMA7AO75326 666 aa11.22□□□□□ -0.61
SRGAP3-202ENST00000383836 SMIM17P0DL12 118 aa11.22□□□□□ -0.61
SRGAP3-202ENST00000383836 MARCH3Q86UD3 253 aa11.22□□□□□ -0.61
SRGAP3-202ENST00000383836 ETFBKMTQ8IXQ9 262 aa11.22□□□□□ -0.61
SRGAP3-202ENST00000383836 PRSS37A4D1T9 235 aa11.22□□□□□ -0.61
SRGAP3-202ENST00000383836 PTOV1Q86YD1 416 aa11.22□□□□□ -0.61
SRGAP3-202ENST00000383836 P2RY12Q9H244 342 aa11.22□□□□□ -0.61
SRGAP3-202ENST00000383836 IL21Q9HBE4 155 aa11.22□□□□□ -0.61
SRGAP3-202ENST00000383836 CACNA1EQ15878 2313 aa11.22□□□□□ -0.61
SRGAP3-202ENST00000383836 H3BP45 60 aa11.22□□□□□ -0.61
SRGAP3-202ENST00000383836 GALR2O43603 387 aaPredicted RBP11.22□□□□□ -0.61
SRGAP3-202ENST00000383836 SCAND1P57086 179 aa11.22□□□□□ -0.61
SRGAP3-202ENST00000383836 TIAL1Q01085 375 aaKnown RBP eCLIP11.22□□□□□ -0.61
SRGAP3-202ENST00000383836 UBE2V2Q15819 145 aa11.22□□□□□ -0.61
SRGAP3-202ENST00000383836 PRSS54Q6PEW0 395 aa11.22□□□□□ -0.61
SRGAP3-202ENST00000383836 MCHR2Q969V1 340 aa11.22□□□□□ -0.61
SRGAP3-202ENST00000383836 MSL2Q9HCI7 577 aa11.22□□□□□ -0.61
SRGAP3-202ENST00000383836 NCBP2LA6PVI3 153 aaKnown RBP11.21□□□□□ -0.61
SRGAP3-202ENST00000383836 EIF4E2O60573 245 aaKnown RBP11.21□□□□□ -0.61
SRGAP3-202ENST00000383836 GRPP07492 148 aa11.21□□□□□ -0.61
SRGAP3-202ENST00000383836 HOXD9P28356 352 aaPredicted RBP11.21□□□□□ -0.61
SRGAP3-202ENST00000383836 DLK1P80370 383 aa11.21□□□□□ -0.61
SRGAP3-202ENST00000383836 SHHQ15465 462 aa11.21□□□□□ -0.61
SRGAP3-202ENST00000383836 TRMT12Q53H54 448 aaKnown RBP11.21□□□□□ -0.61
SRGAP3-202ENST00000383836 ZNF835Q9Y2P0 537 aa11.21□□□□□ -0.61
SRGAP3-202ENST00000383836 POLDIP2Q9Y2S7 368 aa11.21□□□□□ -0.61
SRGAP3-202ENST00000383836 LRRC30A6NM36 301 aa11.21□□□□□ -0.61
SRGAP3-202ENST00000383836 MFNGO00587 321 aa11.21□□□□□ -0.61
SRGAP3-202ENST00000383836 SSR4P51571 173 aa11.21□□□□□ -0.61
SRGAP3-202ENST00000383836 PLA1AQ53H76 456 aa11.21□□□□□ -0.61
SRGAP3-202ENST00000383836 PLEKHB1Q9UF11 243 aaPredicted RBP11.21□□□□□ -0.61
SRGAP3-202ENST00000383836 TICRRQ7Z2Z1 1910 aa11.21□□□□□ -0.61
SRGAP3-202ENST00000383836 LRRK1Q38SD2 2015 aa11.21□□□□□ -0.61
SRGAP3-202ENST00000383836 MAP1LC3B2A6NCE7 125 aa11.21□□□□□ -0.61
SRGAP3-202ENST00000383836 FXYD1O00168 92 aa11.21□□□□□ -0.61
SRGAP3-202ENST00000383836 C12orf73Q69YU5 71 aa11.21□□□□□ -0.61
SRGAP3-202ENST00000383836 PTP4A1Q93096 173 aa11.21□□□□□ -0.61
SRGAP3-202ENST00000383836 MAP1LC3BQ9GZQ8 125 aa11.21□□□□□ -0.61
SRGAP3-202ENST00000383836 TMEM191AQ9H0A3 160 aa11.21□□□□□ -0.61
SRGAP3-202ENST00000383836 LINC00597Q9H2U6 94 aa11.21□□□□□ -0.61
SRGAP3-202ENST00000383836 TMEM265A0A087WTH1 108 aa11.21□□□□□ -0.61
SRGAP3-202ENST00000383836 GPR37O15354 613 aa11.21□□□□□ -0.61
SRGAP3-202ENST00000383836 ADAM11O75078 769 aa11.21□□□□□ -0.61
SRGAP3-202ENST00000383836 AKR7A3O95154 331 aa11.21□□□□□ -0.61
SRGAP3-202ENST00000383836 ONECUT2O95948 504 aa11.21□□□□□ -0.61
SRGAP3-202ENST00000383836 ICAM2P13598 275 aa11.21□□□□□ -0.61
SRGAP3-202ENST00000383836 SSX1Q16384 188 aa11.21□□□□□ -0.61
SRGAP3-202ENST00000383836 TMEM65Q6PI78 240 aa11.21□□□□□ -0.61
SRGAP3-202ENST00000383836 LYPD8Q6UX82 237 aa11.21□□□□□ -0.61
SRGAP3-202ENST00000383836 BATF2Q8N1L9 274 aa11.21□□□□□ -0.61
SRGAP3-202ENST00000383836 HS3ST2Q9Y278 367 aa11.21□□□□□ -0.61
SRGAP3-202ENST00000383836 OR2M5A3KFT3 312 aa11.21□□□□□ -0.62
SRGAP3-202ENST00000383836 RPL18Q07020 188 aaKnown RBP11.21□□□□□ -0.62
SRGAP3-202ENST00000383836 MLF2Q15773 248 aaPredicted RBP11.21□□□□□ -0.62
SRGAP3-202ENST00000383836 DPPA3Q6W0C5 159 aa11.21□□□□□ -0.62
SRGAP3-202ENST00000383836 OR51M1Q9H341 326 aa11.21□□□□□ -0.62
SRGAP3-202ENST00000383836 DYNLRB1Q9NP97 96 aa11.21□□□□□ -0.62
SRGAP3-202ENST00000383836 SELEP16581 610 aa11.21□□□□□ -0.62
SRGAP3-202ENST00000383836 CXCL3P19876 107 aa11.21□□□□□ -0.62
SRGAP3-202ENST00000383836 GNB1P62873 340 aa11.21□□□□□ -0.62
SRGAP3-202ENST00000383836 ADAMTSL4Q6UY14 1074 aa11.21□□□□□ -0.62
SRGAP3-202ENST00000383836 PRSS3P2Q8NHM4 247 aa11.21□□□□□ -0.62
SRGAP3-202ENST00000383836 RAB40CQ96S21 281 aa11.21□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms