RNA–Protein interactions for RNA: ENST00000381342.6

SNRPB-201, Transcript of small nuclear ribonucleoprotein polypeptides B and B1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SNRPB, Length 1,154 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPB-201ENST00000381342 MOB3CQ70IA8 216 aa13.61□□□□□ -0.23
SNRPB-201ENST00000381342 KRT74Q7RTS7 529 aa13.61□□□□□ -0.23
SNRPB-201ENST00000381342 OR13C3Q8NGS6 347 aa13.61□□□□□ -0.23
SNRPB-201ENST00000381342 OR5AK2Q8NH90 309 aa13.61□□□□□ -0.23
SNRPB-201ENST00000381342 RPS4Y2Q8TD47 263 aa13.61□□□□□ -0.23
SNRPB-201ENST00000381342 RGP1Q92546 391 aaPredicted RBP13.61□□□□□ -0.23
SNRPB-201ENST00000381342 ITFG2Q969R8 447 aa13.61□□□□□ -0.23
SNRPB-201ENST00000381342 TIMD4Q96H15 378 aa13.61□□□□□ -0.23
SNRPB-201ENST00000381342 BEX2Q9BXY8 128 aa13.61□□□□□ -0.23
SNRPB-201ENST00000381342 COMMD4Q9H0A8 199 aa13.61□□□□□ -0.23
SNRPB-201ENST00000381342 DUSP21Q9H596 190 aa13.61□□□□□ -0.23
SNRPB-201ENST00000381342 FN3KRPQ9HA64 309 aa13.61□□□□□ -0.23
SNRPB-201ENST00000381342 TRIM36Q9NQ86 728 aa13.61□□□□□ -0.23
SNRPB-201ENST00000381342 C1orf123Q9NWV4 160 aa13.61□□□□□ -0.23
SNRPB-201ENST00000381342 BABAM2Q9NXR7 383 aa13.61□□□□□ -0.23
SNRPB-201ENST00000381342 LPAR3Q9UBY5 353 aa13.61□□□□□ -0.23
SNRPB-201ENST00000381342 CDC42EP3Q9UKI2 254 aa13.61□□□□□ -0.23
SNRPB-201ENST00000381342 HHLA2Q9UM44 414 aa13.61□□□□□ -0.23
SNRPB-201ENST00000381342 ABCA1O95477 2261 aa13.61□□□□□ -0.23
SNRPB-201ENST00000381342 PNMA8CA0A1B0GUJ8 204 aa13.6□□□□□ -0.23
SNRPB-201ENST00000381342 ISPDA4D126 451 aa13.6□□□□□ -0.23
SNRPB-201ENST00000381342 TMEM178BH3BS89 294 aa13.6□□□□□ -0.23
SNRPB-201ENST00000381342 RGS10O43665 173 aa13.6□□□□□ -0.23
SNRPB-201ENST00000381342 ZNF12P17014 697 aa13.6□□□□□ -0.23
SNRPB-201ENST00000381342 ZNF16P17020 682 aaPredicted RBP13.6□□□□□ -0.23
SNRPB-201ENST00000381342 IL2RGP31785 369 aa13.6□□□□□ -0.23
SNRPB-201ENST00000381342 GPM6AP51674 278 aa13.6□□□□□ -0.23
SNRPB-201ENST00000381342 CDH15P55291 814 aa13.6□□□□□ -0.23
SNRPB-201ENST00000381342 CCDC58Q4VC31 144 aa13.6□□□□□ -0.23
SNRPB-201ENST00000381342 RPL22L1Q6P5R6 122 aaKnown RBP13.6□□□□□ -0.23
SNRPB-201ENST00000381342 NANOGP1Q8N7R0 232 aa13.6□□□□□ -0.23
SNRPB-201ENST00000381342 CCDC54Q8NEL0 328 aa13.6□□□□□ -0.23
SNRPB-201ENST00000381342 OR1M1Q8NGA1 313 aa13.6□□□□□ -0.23
SNRPB-201ENST00000381342 OR11L1Q8NGX0 322 aa13.6□□□□□ -0.23
SNRPB-201ENST00000381342 CLDND2Q8NHS1 167 aa13.6□□□□□ -0.23
SNRPB-201ENST00000381342 Q8TCH9 128 aa13.6□□□□□ -0.23
SNRPB-201ENST00000381342 RAB1CQ92928 201 aa13.6□□□□□ -0.23
SNRPB-201ENST00000381342 ADAT3Q96EY9 351 aaPredicted RBP13.6□□□□□ -0.23
SNRPB-201ENST00000381342 RNF170Q96K19 258 aa13.6□□□□□ -0.23
SNRPB-201ENST00000381342 MND1Q9BWT6 205 aa13.6□□□□□ -0.23
SNRPB-201ENST00000381342 CDCA4Q9BXL8 241 aa13.6□□□□□ -0.23
SNRPB-201ENST00000381342 SHARPINQ9H0F6 387 aa13.6□□□□□ -0.23
SNRPB-201ENST00000381342 ERGIC3Q9Y282 383 aa13.6□□□□□ -0.23
SNRPB-201ENST00000381342 NPTNQ9Y639 398 aa13.6□□□□□ -0.23
SNRPB-201ENST00000381342 NIPBLQ6KC79 2804 aaeCLIP13.6□□□□□ -0.232e-6■□□□□ 9.7
SNRPB-201ENST00000381342 NF1P21359 2839 aa13.59□□□□□ -0.23
SNRPB-201ENST00000381342 hCG_1807616A0A1W2PRN6 198 aa13.59□□□□□ -0.23
SNRPB-201ENST00000381342 ANKRD61A6NGH8 418 aa13.59□□□□□ -0.23
SNRPB-201ENST00000381342 LRRC30A6NM36 301 aa13.59□□□□□ -0.23
SNRPB-201ENST00000381342 IFNL4K9M1U5 179 aa13.59□□□□□ -0.23
SNRPB-201ENST00000381342 OGG1O15527 345 aa13.59□□□□□ -0.23
SNRPB-201ENST00000381342 ZNF205O95201 554 aa13.59□□□□□ -0.23
SNRPB-201ENST00000381342 IGHV2-70P01814 119 aa13.59□□□□□ -0.23
SNRPB-201ENST00000381342 ZNF20P17024 532 aa13.59□□□□□ -0.23
SNRPB-201ENST00000381342 HNF1AP20823 631 aa13.59□□□□□ -0.23
SNRPB-201ENST00000381342 BTG1P62324 171 aa13.59□□□□□ -0.23
SNRPB-201ENST00000381342 IRF3Q14653 427 aa13.59□□□□□ -0.23
SNRPB-201ENST00000381342 ZMYND11Q15326 602 aa13.59□□□□□ -0.23
SNRPB-201ENST00000381342 ZNF181Q2M3W8 571 aa13.59□□□□□ -0.23
SNRPB-201ENST00000381342 CEACAM21Q3KPI0 293 aa13.59□□□□□ -0.23
SNRPB-201ENST00000381342 FAM201AQ5SY85 155 aa13.59□□□□□ -0.23
SNRPB-201ENST00000381342 RNLSQ5VYX0 342 aa13.59□□□□□ -0.23
SNRPB-201ENST00000381342 PEG10Q86TG7 708 aaKnown RBP13.59□□□□□ -0.23
SNRPB-201ENST00000381342 NPRL2Q8WTW4 380 aa13.59□□□□□ -0.23
SNRPB-201ENST00000381342 TSEN15Q8WW01 171 aaKnown RBP13.59□□□□□ -0.23
SNRPB-201ENST00000381342 RPL3LQ92901 407 aaKnown RBP13.59□□□□□ -0.23
SNRPB-201ENST00000381342 HPS1Q92902 700 aa13.59□□□□□ -0.23
SNRPB-201ENST00000381342 ERGIC1Q969X5 290 aa13.59□□□□□ -0.23
SNRPB-201ENST00000381342 FGGYQ96C11 551 aa13.59□□□□□ -0.23
SNRPB-201ENST00000381342 SMIM19Q96E16 107 aa13.59□□□□□ -0.23
SNRPB-201ENST00000381342 HIST1H2AAQ96QV6 131 aa13.59□□□□□ -0.23
SNRPB-201ENST00000381342 CHST5Q9GZS9 411 aa13.59□□□□□ -0.23
SNRPB-201ENST00000381342 CCDC90BQ9GZT6 254 aa13.59□□□□□ -0.23
SNRPB-201ENST00000381342 TMEM160Q9NX00 188 aa13.59□□□□□ -0.23
SNRPB-201ENST00000381342 BLOC1S6Q9UL45 172 aa13.59□□□□□ -0.23
SNRPB-201ENST00000381342 LSM2Q9Y333 95 aaKnown RBP13.59□□□□□ -0.23
SNRPB-201ENST00000381342 FN1P02751 2386 aaKnown RBP13.59□□□□□ -0.23
SNRPB-201ENST00000381342 TLN2Q9Y4G6 2542 aa13.58□□□□□ -0.23
SNRPB-201ENST00000381342 OR5B21A6NL26 309 aa13.58□□□□□ -0.24
SNRPB-201ENST00000381342 TMEM210A6NLX4 147 aa13.58□□□□□ -0.24
SNRPB-201ENST00000381342 ZNF732B4DXR9 585 aa13.58□□□□□ -0.24
SNRPB-201ENST00000381342 TGFAP01135 160 aa13.58□□□□□ -0.24
SNRPB-201ENST00000381342 IRF2P14316 349 aa13.58□□□□□ -0.24
SNRPB-201ENST00000381342 EEF1B2P24534 225 aaKnown RBP13.58□□□□□ -0.24
SNRPB-201ENST00000381342 CD80P33681 288 aa13.58□□□□□ -0.24
SNRPB-201ENST00000381342 GNG3P63215 75 aa13.58□□□□□ -0.24
SNRPB-201ENST00000381342 DMKNQ6E0U4 476 aaPredicted RBP13.58□□□□□ -0.24
SNRPB-201ENST00000381342 C11orf53Q8IXP5 236 aa13.58□□□□□ -0.24
SNRPB-201ENST00000381342 C1orf87Q8N0U7 546 aa13.58□□□□□ -0.24
SNRPB-201ENST00000381342 BOLLQ8N9W6 283 aaKnown RBP13.58□□□□□ -0.24
SNRPB-201ENST00000381342 C19orf18Q8NEA5 215 aa13.58□□□□□ -0.24
SNRPB-201ENST00000381342 OR13C5Q8NGS8 318 aa13.58□□□□□ -0.24
SNRPB-201ENST00000381342 TRMT10AQ8TBZ6 339 aaKnown RBP13.58□□□□□ -0.24
SNRPB-201ENST00000381342 OR5M11Q96RB7 305 aa13.58□□□□□ -0.24
SNRPB-201ENST00000381342 GAL3ST1Q99999 423 aa13.58□□□□□ -0.24
SNRPB-201ENST00000381342 TLNRD1Q9H1K6 362 aa13.58□□□□□ -0.24
SNRPB-201ENST00000381342 METTL17Q9H7H0 456 aaPredicted RBP13.58□□□□□ -0.24
SNRPB-201ENST00000381342 RNF7Q9UBF6 113 aa13.58□□□□□ -0.24
SNRPB-201ENST00000381342 GATBO75879 557 aaKnown RBP13.57□□□□□ -0.24
SNRPB-201ENST00000381342 EGR1P18146 543 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms