RNA–Protein interactions for RNA: ENST00000381196.8

PTPRD-203, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 9,911 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-203ENST00000381196 VSIG4Q9Y279 399 aa4.41□□□□□ -1.7
PTPRD-203ENST00000381196 CSAG2Q9Y5P2 127 aa4.41□□□□□ -1.7
PTPRD-203ENST00000381196 SPTBN4Q9H254 2564 aa4.41□□□□□ -1.7
PTPRD-203ENST00000381196 NME1P15531 152 aaKnown RBP4.41□□□□□ -1.7
PTPRD-203ENST00000381196 CD68P34810 354 aaPredicted RBP4.41□□□□□ -1.7
PTPRD-203ENST00000381196 DCDP81605 110 aaKnown RBP4.41□□□□□ -1.7
PTPRD-203ENST00000381196 CLN3Q13286 438 aa4.41□□□□□ -1.7
PTPRD-203ENST00000381196 CRMP1Q14194 572 aa4.41□□□□□ -1.7
PTPRD-203ENST00000381196 ZNF362Q5T0B9 420 aaPredicted RBP4.41□□□□□ -1.7
PTPRD-203ENST00000381196 FDX2Q6P4F2 183 aa4.41□□□□□ -1.7
PTPRD-203ENST00000381196 OR4D5Q8NGN0 318 aa4.41□□□□□ -1.7
PTPRD-203ENST00000381196 ZNF707Q96C28 371 aaPredicted RBP4.41□□□□□ -1.7
PTPRD-203ENST00000381196 SFRP2Q96HF1 295 aa4.41□□□□□ -1.7
PTPRD-203ENST00000381196 CALHM2Q9HA72 323 aa4.41□□□□□ -1.7
PTPRD-203ENST00000381196 TM7SF3Q9NS93 570 aa4.41□□□□□ -1.7
PTPRD-203ENST00000381196 DNMT3BQ9UBC3 853 aaKnown RBP4.41□□□□□ -1.7
PTPRD-203ENST00000381196 LSM2Q9Y333 95 aaKnown RBP4.41□□□□□ -1.7
PTPRD-203ENST00000381196 TRBV11-1A0A0K0K1C0 115 aa4.41□□□□□ -1.7
PTPRD-203ENST00000381196 TRAPPC2LH3BP13 241 aa4.41□□□□□ -1.7
PTPRD-203ENST00000381196 SGSHP51688 502 aa4.41□□□□□ -1.7
PTPRD-203ENST00000381196 SLC37A1P57057 533 aa4.41□□□□□ -1.7
PTPRD-203ENST00000381196 Q1RN00 199 aa4.41□□□□□ -1.7
PTPRD-203ENST00000381196 OR2B11Q5JQS5 317 aa4.41□□□□□ -1.7
PTPRD-203ENST00000381196 MRPL21Q7Z2W9 205 aaKnown RBP4.41□□□□□ -1.7
PTPRD-203ENST00000381196 POC1AQ8NBT0 407 aa4.41□□□□□ -1.7
PTPRD-203ENST00000381196 SLC38A5Q8WUX1 472 aa4.41□□□□□ -1.7
PTPRD-203ENST00000381196 SGPP1Q9BX95 441 aa4.41□□□□□ -1.7
PTPRD-203ENST00000381196 ZBP1Q9H171 429 aa4.41□□□□□ -1.7
PTPRD-203ENST00000381196 KCNK12Q9HB15 430 aa4.41□□□□□ -1.7
PTPRD-203ENST00000381196 DECR2Q9NUI1 292 aa4.41□□□□□ -1.7
PTPRD-203ENST00000381196 FBLN5Q9UBX5 448 aa4.41□□□□□ -1.7
PTPRD-203ENST00000381196 AK3Q9UIJ7 227 aa4.41□□□□□ -1.7
PTPRD-203ENST00000381196 TRAV39A0A0B4J263 110 aa4.41□□□□□ -1.7
PTPRD-203ENST00000381196 GPR31O00270 319 aa4.41□□□□□ -1.7
PTPRD-203ENST00000381196 CTSVO60911 334 aa4.41□□□□□ -1.7
PTPRD-203ENST00000381196 WNT11O96014 354 aa4.41□□□□□ -1.7
PTPRD-203ENST00000381196 CRHP06850 196 aa4.41□□□□□ -1.7
PTPRD-203ENST00000381196 CPMP14384 443 aa4.41□□□□□ -1.7
PTPRD-203ENST00000381196 OR3A1P47881 315 aa4.41□□□□□ -1.7
PTPRD-203ENST00000381196 LGALS4P56470 323 aa4.41□□□□□ -1.7
PTPRD-203ENST00000381196 KLF3P57682 345 aaPredicted RBP4.41□□□□□ -1.7
PTPRD-203ENST00000381196 PPP2CAP67775 309 aa4.41□□□□□ -1.7
PTPRD-203ENST00000381196 IGFBP7Q16270 282 aa4.41□□□□□ -1.7
PTPRD-203ENST00000381196 RGS7BPQ6MZT1 257 aaPredicted RBP4.41□□□□□ -1.7
PTPRD-203ENST00000381196 PLBD1Q6P4A8 553 aa4.41□□□□□ -1.7
PTPRD-203ENST00000381196 WDR83Q9BRX9 315 aaKnown RBP4.41□□□□□ -1.7
PTPRD-203ENST00000381196 CDCP1Q9H5V8 836 aa4.41□□□□□ -1.7
PTPRD-203ENST00000381196 ZNF552Q9H707 407 aaPredicted RBP4.41□□□□□ -1.7
PTPRD-203ENST00000381196 PEF1Q9UBV8 284 aaKnown RBP4.41□□□□□ -1.7
PTPRD-203ENST00000381196 TLN2Q9Y4G6 2542 aa4.41□□□□□ -1.7
PTPRD-203ENST00000381196 ITGBL1O95965 494 aaPredicted RBP4.41□□□□□ -1.7
PTPRD-203ENST00000381196 HOXB3P14651 431 aaPredicted RBP4.41□□□□□ -1.7
PTPRD-203ENST00000381196 BRS3P32247 399 aa4.41□□□□□ -1.7
PTPRD-203ENST00000381196 CLDN15P56746 228 aa4.41□□□□□ -1.7
PTPRD-203ENST00000381196 RPS23P62266 143 aaKnown RBP4.41□□□□□ -1.7
PTPRD-203ENST00000381196 HLA-DRB3P79483 266 aa4.41□□□□□ -1.7
PTPRD-203ENST00000381196 IAH1Q2TAA2 248 aaPredicted RBP4.41□□□□□ -1.7
PTPRD-203ENST00000381196 C18orf63Q68DL7 685 aa4.41□□□□□ -1.7
PTPRD-203ENST00000381196 CLEC9AQ6UXN8 241 aa4.41□□□□□ -1.7
PTPRD-203ENST00000381196 SPNS2Q8IVW8 549 aa4.41□□□□□ -1.7
PTPRD-203ENST00000381196 OR13C9Q8NGT0 318 aa4.41□□□□□ -1.7
PTPRD-203ENST00000381196 ORAOV1Q8WV07 137 aa4.41□□□□□ -1.7
PTPRD-203ENST00000381196 KIR3DX1Q9H7L2 352 aa4.41□□□□□ -1.7
PTPRD-203ENST00000381196 NPDC1Q9NQX5 325 aaPredicted RBP4.41□□□□□ -1.7
PTPRD-203ENST00000381196 HS3ST2Q9Y278 367 aa4.41□□□□□ -1.7
PTPRD-203ENST00000381196 KIAA1324LA8MWY0 1029 aaPredicted RBP4.41□□□□□ -1.7
PTPRD-203ENST00000381196 GALR3O60755 368 aaPredicted RBP4.41□□□□□ -1.7
PTPRD-203ENST00000381196 PDGFBP01127 241 aaPredicted RBP4.41□□□□□ -1.7
PTPRD-203ENST00000381196 OR5AL1P0C617 328 aa4.41□□□□□ -1.7
PTPRD-203ENST00000381196 PTGFRP43088 359 aa4.41□□□□□ -1.7
PTPRD-203ENST00000381196 CLDN12P56749 244 aa4.41□□□□□ -1.7
PTPRD-203ENST00000381196 RAC1P63000 192 aa4.41□□□□□ -1.7
PTPRD-203ENST00000381196 INSM1Q01101 510 aaPredicted RBP4.41□□□□□ -1.7
PTPRD-203ENST00000381196 RPEL1Q2QD12 228 aa4.41□□□□□ -1.7
PTPRD-203ENST00000381196 PLPPR5Q32ZL2 321 aa4.41□□□□□ -1.7
PTPRD-203ENST00000381196 SHISA6Q6ZSJ9 500 aa4.41□□□□□ -1.7
PTPRD-203ENST00000381196 ZCCHC14Q8WYQ9 949 aaKnown RBP4.41□□□□□ -1.7
PTPRD-203ENST00000381196 SPSB1Q96BD6 273 aa4.41□□□□□ -1.7
PTPRD-203ENST00000381196 ELSPBP1Q96BH3 223 aa4.41□□□□□ -1.7
PTPRD-203ENST00000381196 SFXN3Q9BWM7 321 aa4.41□□□□□ -1.7
PTPRD-203ENST00000381196 P2RY12Q9H244 342 aa4.41□□□□□ -1.7
PTPRD-203ENST00000381196 PPP1R3EQ9H7J1 279 aa4.41□□□□□ -1.7
PTPRD-203ENST00000381196 AMBNQ9NP70 447 aa4.41□□□□□ -1.7
PTPRD-203ENST00000381196 CISD1Q9NZ45 108 aaKnown RBP4.41□□□□□ -1.7
PTPRD-203ENST00000381196 MMP17Q9ULZ9 603 aa4.41□□□□□ -1.7
PTPRD-203ENST00000381196 SORL1Q92673 2214 aa4.41□□□□□ -1.7
PTPRD-203ENST00000381196 TRAV36DV7A0A075B6V5 113 aa4.41□□□□□ -1.7
PTPRD-203ENST00000381196 FAM183AA6NL82 134 aa4.41□□□□□ -1.7
PTPRD-203ENST00000381196 DNPH1O43598 174 aa4.41□□□□□ -1.7
PTPRD-203ENST00000381196 DPTQ07507 201 aa4.41□□□□□ -1.7
PTPRD-203ENST00000381196 LRRC37A5PQ49AS3 106 aa4.41□□□□□ -1.7
PTPRD-203ENST00000381196 ANKRD33Q7Z3H0 272 aa4.41□□□□□ -1.7
PTPRD-203ENST00000381196 OR6N2Q8NGY6 317 aa4.41□□□□□ -1.7
PTPRD-203ENST00000381196 CDX2Q99626 313 aaPredicted RBP4.41□□□□□ -1.7
PTPRD-203ENST00000381196 MACROD1Q9BQ69 325 aa4.41□□□□□ -1.7
PTPRD-203ENST00000381196 SLC46A2Q9BY10 475 aa4.41□□□□□ -1.7
PTPRD-203ENST00000381196 KCNK15Q9H427 330 aa4.41□□□□□ -1.7
PTPRD-203ENST00000381196 A0A0U1RQK1 487 aa4.4□□□□□ -1.7
PTPRD-203ENST00000381196 ANKRD30BLA7E2S9 258 aa4.4□□□□□ -1.7
PTPRD-203ENST00000381196 SEMA7AO75326 666 aa4.4□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms