RNA–Protein interactions for RNA: ENST00000380358.8

CHD3-203, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2 BASIC

Gene CHD3, Length 7,356 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-203ENST00000380358 LRRC29Q8WV35 223 aa11.18□□□□□ -0.62
CHD3-203ENST00000380358 KTI12Q96EK9 354 aaPredicted RBP11.18□□□□□ -0.62
CHD3-203ENST00000380358 TMEM56Q96MV1 263 aa11.18□□□□□ -0.62
CHD3-203ENST00000380358 PRO1933Q9H354 126 aa11.18□□□□□ -0.62
CHD3-203ENST00000380358 DCCP43146 1447 aa11.18□□□□□ -0.62
CHD3-203ENST00000380358 A0A1W2PR48 441 aa11.18□□□□□ -0.62
CHD3-203ENST00000380358 A1L4Q6 167 aa11.18□□□□□ -0.62
CHD3-203ENST00000380358 FZD6O60353 706 aa11.18□□□□□ -0.62
CHD3-203ENST00000380358 CHRNA7P36544 502 aa11.18□□□□□ -0.62
CHD3-203ENST00000380358 REG1BP48304 166 aa11.18□□□□□ -0.62
CHD3-203ENST00000380358 OR2D2Q9H210 308 aa11.18□□□□□ -0.62
CHD3-203ENST00000380358 TECRQ9NZ01 308 aaKnown RBP11.18□□□□□ -0.62
CHD3-203ENST00000380358 SHROOM3Q8TF72 1996 aa11.18□□□□□ -0.62
CHD3-203ENST00000380358 AKR7A2O43488 359 aa11.18□□□□□ -0.62
CHD3-203ENST00000380358 NGFP01138 241 aa11.18□□□□□ -0.62
CHD3-203ENST00000380358 ARRB2P32121 409 aa11.18□□□□□ -0.62
CHD3-203ENST00000380358 PRRX1P54821 245 aa11.18□□□□□ -0.62
CHD3-203ENST00000380358 DLX1P56177 255 aa11.18□□□□□ -0.62
CHD3-203ENST00000380358 ELFN2Q5R3F8 820 aa11.18□□□□□ -0.62
CHD3-203ENST00000380358 OR2L13Q8N349 312 aa11.18□□□□□ -0.62
CHD3-203ENST00000380358 OR1N2Q8NGR9 330 aa11.18□□□□□ -0.62
CHD3-203ENST00000380358 OR2V1Q8NHB1 315 aa11.18□□□□□ -0.62
CHD3-203ENST00000380358 ASB13Q8WXK3 278 aa11.18□□□□□ -0.62
CHD3-203ENST00000380358 P2RX4Q99571 388 aa11.18□□□□□ -0.62
CHD3-203ENST00000380358 C19orf43Q9BQ61 176 aa11.18□□□□□ -0.62
CHD3-203ENST00000380358 SEBOXQ9HB31 216 aaPredicted RBP11.18□□□□□ -0.62
CHD3-203ENST00000380358 DUOX1Q9NRD9 1551 aa11.18□□□□□ -0.62
CHD3-203ENST00000380358 HLA-GP17693 338 aa11.18□□□□□ -0.62
CHD3-203ENST00000380358 MTNR1BP49286 362 aa11.18□□□□□ -0.62
CHD3-203ENST00000380358 ZNF561Q8N587 486 aa11.18□□□□□ -0.62
CHD3-203ENST00000380358 TAAR9Q96RI9 348 aa11.18□□□□□ -0.62
CHD3-203ENST00000380358 TEAD3Q99594 435 aa11.18□□□□□ -0.62
CHD3-203ENST00000380358 SLCO1C1Q9NYB5 712 aa11.18□□□□□ -0.62
CHD3-203ENST00000380358 PRSS8Q16651 343 aa11.18□□□□□ -0.62
CHD3-203ENST00000380358 TM4SF19Q96DZ7 209 aa11.18□□□□□ -0.62
CHD3-203ENST00000380358 POM121Q96HA1 1249 aa11.18□□□□□ -0.62
CHD3-203ENST00000380358 ZBP1Q9H171 429 aa11.18□□□□□ -0.62
CHD3-203ENST00000380358 ISG20L2Q9H9L3 353 aaKnown RBP11.18□□□□□ -0.62
CHD3-203ENST00000380358 SPEF2Q9C093 1822 aa11.17□□□□□ -0.62
CHD3-203ENST00000380358 TUBAL3A6NHL2 446 aa11.17□□□□□ -0.62
CHD3-203ENST00000380358 DSCR3O14972 297 aa11.17□□□□□ -0.62
CHD3-203ENST00000380358 NTN1O95631 604 aa11.17□□□□□ -0.62
CHD3-203ENST00000380358 IGKV3-20P01619 116 aa11.17□□□□□ -0.62
CHD3-203ENST00000380358 TMIGD3P0DMS9 266 aaPredicted RBP11.17□□□□□ -0.62
CHD3-203ENST00000380358 SELENBP1Q13228 472 aa11.17□□□□□ -0.62
CHD3-203ENST00000380358 DUSP6Q16828 381 aa11.17□□□□□ -0.62
CHD3-203ENST00000380358 MRAP2Q96G30 205 aa11.17□□□□□ -0.62
CHD3-203ENST00000380358 OR2A14Q96R47 310 aa11.17□□□□□ -0.62
CHD3-203ENST00000380358 KIR3DX1Q9H7L2 352 aa11.17□□□□□ -0.62
CHD3-203ENST00000380358 NPPBP16860 134 aa11.17□□□□□ -0.62
CHD3-203ENST00000380358 SLC51BQ86UW2 128 aa11.17□□□□□ -0.62
CHD3-203ENST00000380358 SLC25A43Q8WUT9 341 aaPredicted RBP11.17□□□□□ -0.62
CHD3-203ENST00000380358 RSG1Q9BU20 258 aa11.17□□□□□ -0.62
CHD3-203ENST00000380358 NDUFB11Q9NX14 153 aa11.17□□□□□ -0.62
CHD3-203ENST00000380358 ADAM11O75078 769 aa11.17□□□□□ -0.62
CHD3-203ENST00000380358 TPBGQ13641 420 aa11.17□□□□□ -0.62
CHD3-203ENST00000380358 B3GNTL1Q67FW5 361 aaPredicted RBP11.17□□□□□ -0.62
CHD3-203ENST00000380358 WDR74Q6RFH5 385 aaPredicted RBP11.17□□□□□ -0.62
CHD3-203ENST00000380358 ZNF793Q6ZN11 406 aa11.17□□□□□ -0.62
CHD3-203ENST00000380358 ELSPBP1Q96BH3 223 aa11.17□□□□□ -0.62
CHD3-203ENST00000380358 MMP25Q9NPA2 562 aa11.17□□□□□ -0.62
CHD3-203ENST00000380358 ZNF815PA8K554 130 aa11.17□□□□□ -0.62
CHD3-203ENST00000380358 GNG4P50150 75 aa11.17□□□□□ -0.62
CHD3-203ENST00000380358 PYCR3Q53H96 274 aa11.17□□□□□ -0.62
CHD3-203ENST00000380358 CD276Q5ZPR3 534 aa11.17□□□□□ -0.62
CHD3-203ENST00000380358 SLC16A12Q6ZSM3 486 aa11.17□□□□□ -0.62
CHD3-203ENST00000380358 TREX1Q9NSU2 369 aa11.17□□□□□ -0.62
CHD3-203ENST00000380358 KCNMB2Q9Y691 235 aa11.17□□□□□ -0.62
CHD3-203ENST00000380358 CACNA1CQ13936 2221 aa11.17□□□□□ -0.62
CHD3-203ENST00000380358 UBL3O95164 117 aa11.17□□□□□ -0.62
CHD3-203ENST00000380358 SP1P08047 785 aa11.17□□□□□ -0.62
CHD3-203ENST00000380358 SDHAP31040 664 aa11.17□□□□□ -0.62
CHD3-203ENST00000380358 GALR1P47211 349 aa11.17□□□□□ -0.62
CHD3-203ENST00000380358 ID4P47928 161 aa11.17□□□□□ -0.62
CHD3-203ENST00000380358 ZNF137PP52743 207 aa11.17□□□□□ -0.62
CHD3-203ENST00000380358 TRIP6Q15654 476 aaKnown RBP11.17□□□□□ -0.62
CHD3-203ENST00000380358 C19orf54Q5BKX5 351 aa11.17□□□□□ -0.62
CHD3-203ENST00000380358 SNX22Q96L94 193 aa11.17□□□□□ -0.62
CHD3-203ENST00000380358 SDF2Q99470 211 aa11.17□□□□□ -0.62
CHD3-203ENST00000380358 ERRFI1Q9UJM3 462 aaPredicted RBP11.17□□□□□ -0.62
CHD3-203ENST00000380358 TMEM30CPA0ZSE6 113 aa11.16□□□□□ -0.62
CHD3-203ENST00000380358 TRIM77I1YAP6 450 aa11.16□□□□□ -0.62
CHD3-203ENST00000380358 CD3EP07766 207 aa11.16□□□□□ -0.62
CHD3-203ENST00000380358 PRF1P14222 555 aa11.16□□□□□ -0.62
CHD3-203ENST00000380358 HTN3P15516 51 aa11.16□□□□□ -0.62
CHD3-203ENST00000380358 ROM1Q03395 351 aa11.16□□□□□ -0.62
CHD3-203ENST00000380358 ASB16Q96NS5 453 aa11.16□□□□□ -0.62
CHD3-203ENST00000380358 TNFRSF10CO14798 259 aa11.16□□□□□ -0.62
CHD3-203ENST00000380358 ARG1P05089 322 aa11.16□□□□□ -0.62
CHD3-203ENST00000380358 SPI1P17947 270 aa11.16□□□□□ -0.62
CHD3-203ENST00000380358 ERVS71-1P61550 626 aa11.16□□□□□ -0.62
CHD3-203ENST00000380358 SLC25A30Q5SVS4 291 aa11.16□□□□□ -0.62
CHD3-203ENST00000380358 ATOH8Q96SQ7 321 aa11.16□□□□□ -0.62
CHD3-203ENST00000380358 A4GALTQ9NPC4 353 aa11.16□□□□□ -0.62
CHD3-203ENST00000380358 SCN3AQ9NY46 2000 aa11.16□□□□□ -0.62
CHD3-203ENST00000380358 MASP2O00187 686 aa11.16□□□□□ -0.62
CHD3-203ENST00000380358 CD3DP04234 171 aa11.16□□□□□ -0.62
CHD3-203ENST00000380358 SLC37A1P57057 533 aa11.16□□□□□ -0.62
CHD3-203ENST00000380358 TMEM108Q6UXF1 575 aa11.16□□□□□ -0.62
CHD3-203ENST00000380358 TEX37Q96LM6 180 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms