RNA–Protein interactions for RNA: ENST00000377808.8

SMARCE1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 1,307 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-203ENST00000377808 WDR38Q5JTN6 314 aa9.62□□□□□ -0.87
SMARCE1-203ENST00000377808 TEX36Q5VZQ5 186 aa9.62□□□□□ -0.87
SMARCE1-203ENST00000377808 DUX4L9Q6RFH8 374 aaPredicted RBP9.62□□□□□ -0.87
SMARCE1-203ENST00000377808 ZNF841Q6ZN19 808 aa9.62□□□□□ -0.87
SMARCE1-203ENST00000377808 SLC36A1Q7Z2H8 476 aa9.62□□□□□ -0.87
SMARCE1-203ENST00000377808 SIGLECL1Q8N7X8 197 aa9.62□□□□□ -0.87
SMARCE1-203ENST00000377808 SCCPDHQ8NBX0 429 aa9.62□□□□□ -0.87
SMARCE1-203ENST00000377808 OR5T2Q8NGG2 359 aa9.62□□□□□ -0.87
SMARCE1-203ENST00000377808 OR2T27Q8NH04 317 aa9.62□□□□□ -0.87
SMARCE1-203ENST00000377808 STMN2Q93045 179 aa9.62□□□□□ -0.87
SMARCE1-203ENST00000377808 UBE2FQ969M7 185 aa9.62□□□□□ -0.87
SMARCE1-203ENST00000377808 PCGF1Q9BSM1 259 aa9.62□□□□□ -0.87
SMARCE1-203ENST00000377808 C9orf16Q9BUW7 83 aa9.62□□□□□ -0.87
SMARCE1-203ENST00000377808 FGF23Q9GZV9 251 aaPredicted RBP9.62□□□□□ -0.87
SMARCE1-203ENST00000377808 PLEKHA1Q9HB21 404 aa9.62□□□□□ -0.87
SMARCE1-203ENST00000377808 SMURF1Q9HCE7 757 aa9.62□□□□□ -0.87
SMARCE1-203ENST00000377808 GPR173Q9NS66 373 aa9.62□□□□□ -0.87
SMARCE1-203ENST00000377808 USE1Q9NZ43 259 aa9.62□□□□□ -0.87
SMARCE1-203ENST00000377808 DUX4Q9UBX2 424 aa9.62□□□□□ -0.87
SMARCE1-203ENST00000377808 ZNF69Q9UC07 566 aa9.62□□□□□ -0.87
SMARCE1-203ENST00000377808 GNG8Q9UK08 70 aa9.62□□□□□ -0.87
SMARCE1-203ENST00000377808 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP9.62□□□□□ -0.87
SMARCE1-203ENST00000377808 SLC22A13Q9Y226 551 aa9.62□□□□□ -0.87
SMARCE1-203ENST00000377808 GMPPBQ9Y5P6 360 aa9.62□□□□□ -0.87
SMARCE1-203ENST00000377808 COL6A5A8TX70 2615 aa9.62□□□□□ -0.87
SMARCE1-203ENST00000377808 KIR2DS1A0A191URI9 304 aa9.61□□□□□ -0.87
SMARCE1-203ENST00000377808 A0A1B0GVI7 797 aa9.61□□□□□ -0.87
SMARCE1-203ENST00000377808 METTL15A6NJ78 407 aa9.61□□□□□ -0.87
SMARCE1-203ENST00000377808 SRRM5B3KS81 715 aa9.61□□□□□ -0.87
SMARCE1-203ENST00000377808 DVL1O14640 695 aa9.61□□□□□ -0.87
SMARCE1-203ENST00000377808 ENTPD6O75354 484 aa9.61□□□□□ -0.87
SMARCE1-203ENST00000377808 NRASP01111 189 aa9.61□□□□□ -0.87
SMARCE1-203ENST00000377808 ATP6V1B1P15313 513 aa9.61□□□□□ -0.87
SMARCE1-203ENST00000377808 GLRA1P23415 457 aa9.61□□□□□ -0.87
SMARCE1-203ENST00000377808 GNG3P63215 75 aa9.61□□□□□ -0.87
SMARCE1-203ENST00000377808 PAX2Q02962 417 aa9.61□□□□□ -0.87
SMARCE1-203ENST00000377808 CEACAM21Q3KPI0 293 aa9.61□□□□□ -0.87
SMARCE1-203ENST00000377808 ZNF684Q5T5D7 378 aa9.61□□□□□ -0.87
SMARCE1-203ENST00000377808 USP43Q70EL4 1123 aa9.61□□□□□ -0.87
SMARCE1-203ENST00000377808 BTN2A1Q7KYR7 527 aa9.61□□□□□ -0.87
SMARCE1-203ENST00000377808 ELMOD2Q8IZ81 293 aa9.61□□□□□ -0.87
SMARCE1-203ENST00000377808 BCL6BQ8N143 479 aaPredicted RBP9.61□□□□□ -0.87
SMARCE1-203ENST00000377808 FAM216BQ8N7L0 139 aa9.61□□□□□ -0.87
SMARCE1-203ENST00000377808 PNLDC1Q8NA58 520 aaKnown RBP9.61□□□□□ -0.87
SMARCE1-203ENST00000377808 RNFT2Q96EX2 444 aa9.61□□□□□ -0.87
SMARCE1-203ENST00000377808 DUX5Q96PT3 197 aa9.61□□□□□ -0.87
SMARCE1-203ENST00000377808 ADI1Q9BV57 179 aa9.61□□□□□ -0.87
SMARCE1-203ENST00000377808 TLNRD1Q9H1K6 362 aa9.61□□□□□ -0.87
SMARCE1-203ENST00000377808 WDR13Q9H1Z4 485 aa9.61□□□□□ -0.87
SMARCE1-203ENST00000377808 MXRA5Q9NR99 2828 aa9.61□□□□□ -0.87
SMARCE1-203ENST00000377808 NDUFB3O43676 98 aa9.6□□□□□ -0.87
SMARCE1-203ENST00000377808 SRSF10O75494 262 aaKnown RBP9.6□□□□□ -0.87
SMARCE1-203ENST00000377808 RHBDL1O75783 438 aa9.6□□□□□ -0.87
SMARCE1-203ENST00000377808 TOX4O94842 621 aa9.6□□□□□ -0.87
SMARCE1-203ENST00000377808 TFF1P04155 84 aa9.6□□□□□ -0.87
SMARCE1-203ENST00000377808 GABRA2P47869 451 aa9.6□□□□□ -0.87
SMARCE1-203ENST00000377808 MTNR1AP48039 350 aa9.6□□□□□ -0.87
SMARCE1-203ENST00000377808 BAMBIQ13145 260 aa9.6□□□□□ -0.87
SMARCE1-203ENST00000377808 TMED1Q13445 227 aa9.6□□□□□ -0.87
SMARCE1-203ENST00000377808 TP53I3Q53FA7 332 aa9.6□□□□□ -0.87
SMARCE1-203ENST00000377808 CLVS2Q5SYC1 327 aa9.6□□□□□ -0.87
SMARCE1-203ENST00000377808 ZBTB37Q5TC79 503 aa9.6□□□□□ -0.87
SMARCE1-203ENST00000377808 GPR157Q5UAW9 335 aa9.6□□□□□ -0.87
SMARCE1-203ENST00000377808 METTL11BQ5VVY1 283 aa9.6□□□□□ -0.87
SMARCE1-203ENST00000377808 HAGHLQ6PII5 290 aaPredicted RBP9.6□□□□□ -0.87
SMARCE1-203ENST00000377808 BRD3OSQ6XYD6 125 aa9.6□□□□□ -0.87
SMARCE1-203ENST00000377808 ZBTB49Q6ZSB9 765 aa9.6□□□□□ -0.87
SMARCE1-203ENST00000377808 DOK3Q7L591 496 aa9.6□□□□□ -0.87
SMARCE1-203ENST00000377808 BATF2Q8N1L9 274 aa9.6□□□□□ -0.87
SMARCE1-203ENST00000377808 PQLC1Q8N2U9 271 aa9.6□□□□□ -0.87
SMARCE1-203ENST00000377808 FGFRL1Q8N441 504 aa9.6□□□□□ -0.87
SMARCE1-203ENST00000377808 OR5A2Q8NGI9 324 aa9.6□□□□□ -0.87
SMARCE1-203ENST00000377808 OR10Z1Q8NGY1 313 aa9.6□□□□□ -0.87
SMARCE1-203ENST00000377808 TRUB1Q8WWH5 349 aaKnown RBP9.6□□□□□ -0.87
SMARCE1-203ENST00000377808 H1FXQ92522 213 aaKnown RBP9.6□□□□□ -0.87
SMARCE1-203ENST00000377808 C12orf43Q96C57 262 aaKnown RBP9.6□□□□□ -0.87
SMARCE1-203ENST00000377808 HRASLS5Q96KN8 279 aa9.6□□□□□ -0.87
SMARCE1-203ENST00000377808 MBOAT4Q96T53 435 aa9.6□□□□□ -0.87
SMARCE1-203ENST00000377808 OR51I2Q9H344 312 aa9.6□□□□□ -0.87
SMARCE1-203ENST00000377808 ACOXLQ9NUZ1 547 aa9.6□□□□□ -0.87
SMARCE1-203ENST00000377808 ONECUT1Q9UBC0 465 aa9.6□□□□□ -0.87
SMARCE1-203ENST00000377808 AASSQ9UDR5 926 aa9.6□□□□□ -0.87
SMARCE1-203ENST00000377808 DAPL1A0PJW8 107 aa9.59□□□□□ -0.87
SMARCE1-203ENST00000377808 OR5B21A6NL26 309 aa9.59□□□□□ -0.87
SMARCE1-203ENST00000377808 SNTNA6NMZ2 147 aa9.59□□□□□ -0.87
SMARCE1-203ENST00000377808 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.59□□□□□ -0.87
SMARCE1-203ENST00000377808 TNFRSF13BO14836 293 aaPredicted RBP9.59□□□□□ -0.87
SMARCE1-203ENST00000377808 SYT7O43581 403 aa9.59□□□□□ -0.87
SMARCE1-203ENST00000377808 IGLV3-1P01715 115 aa9.59□□□□□ -0.87
SMARCE1-203ENST00000377808 SFTPBP07988 381 aa9.59□□□□□ -0.87
SMARCE1-203ENST00000377808 NDUFB7P17568 137 aa9.59□□□□□ -0.87
SMARCE1-203ENST00000377808 CFHR2P36980 270 aa9.59□□□□□ -0.87
SMARCE1-203ENST00000377808 HAAOP46952 286 aa9.59□□□□□ -0.87
SMARCE1-203ENST00000377808 ARF6P62330 175 aa9.59□□□□□ -0.87
SMARCE1-203ENST00000377808 ZNF85Q03923 595 aa9.59□□□□□ -0.87
SMARCE1-203ENST00000377808 LRRC10Q5BKY1 277 aa9.59□□□□□ -0.87
SMARCE1-203ENST00000377808 MEDAGQ5VYS4 303 aa9.59□□□□□ -0.87
SMARCE1-203ENST00000377808 STUMQ69YW2 141 aa9.59□□□□□ -0.87
SMARCE1-203ENST00000377808 C12orf54Q6X4T0 127 aa9.59□□□□□ -0.87
SMARCE1-203ENST00000377808 CATSPERDQ86XM0 798 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms