RNA–Protein interactions for RNA: ENST00000375340.10

SMC1A-202, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 1 (best) BASIC

Gene SMC1A, Length 9,930 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-202ENST00000375340 PECRQ9BY49 303 aa5.83□□□□□ -1.48
SMC1A-202ENST00000375340 HAO2Q9NYQ3 351 aa5.83□□□□□ -1.48
SMC1A-202ENST00000375340 BOKQ9UMX3 212 aaPredicted RBP5.83□□□□□ -1.48
SMC1A-202ENST00000375340 ST3GAL6Q9Y274 331 aa5.83□□□□□ -1.48
SMC1A-202ENST00000375340 NSG2Q9Y328 171 aa5.83□□□□□ -1.48
SMC1A-202ENST00000375340 A0A1W2PPC4 97 aa5.83□□□□□ -1.48
SMC1A-202ENST00000375340 OR6C6A6NF89 314 aa5.83□□□□□ -1.48
SMC1A-202ENST00000375340 SOCS1O15524 211 aa5.83□□□□□ -1.48
SMC1A-202ENST00000375340 NFYBP25208 207 aa5.83□□□□□ -1.48
SMC1A-202ENST00000375340 FGF8P55075 233 aaPredicted RBP5.83□□□□□ -1.48
SMC1A-202ENST00000375340 GGTLC2Q14390 218 aa5.83□□□□□ -1.48
SMC1A-202ENST00000375340 SPINK9Q5DT21 86 aa5.83□□□□□ -1.48
SMC1A-202ENST00000375340 VASH2Q86V25 355 aa5.83□□□□□ -1.48
SMC1A-202ENST00000375340 OR5M8Q8NGP6 311 aa5.83□□□□□ -1.48
SMC1A-202ENST00000375340 OR4A16Q8NH70 328 aa5.83□□□□□ -1.48
SMC1A-202ENST00000375340 GPBAR1Q8TDU6 330 aa5.83□□□□□ -1.48
SMC1A-202ENST00000375340 ASB13Q8WXK3 278 aa5.83□□□□□ -1.48
SMC1A-202ENST00000375340 EDAQ92838 391 aa5.83□□□□□ -1.48
SMC1A-202ENST00000375340 RNF212BA8MTL3 300 aa5.83□□□□□ -1.48
SMC1A-202ENST00000375340 ZNF814B7Z6K7 855 aa5.83□□□□□ -1.48
SMC1A-202ENST00000375340 EIF1BO60739 113 aaKnown RBP5.83□□□□□ -1.48
SMC1A-202ENST00000375340 BGLAPP02818 100 aa5.83□□□□□ -1.48
SMC1A-202ENST00000375340 CCR5P51681 352 aa5.83□□□□□ -1.48
SMC1A-202ENST00000375340 PPIAP62937 165 aaKnown RBP5.83□□□□□ -1.48
SMC1A-202ENST00000375340 ZNF239Q16600 458 aaKnown RBP5.83□□□□□ -1.48
SMC1A-202ENST00000375340 CPEB4Q17RY0 729 aaKnown RBP eCLIP5.83□□□□□ -1.48
SMC1A-202ENST00000375340 RPL7L1Q6DKI1 246 aaKnown RBP5.83□□□□□ -1.48
SMC1A-202ENST00000375340 FAM199XQ6PEV8 388 aaPredicted RBP5.83□□□□□ -1.48
SMC1A-202ENST00000375340 FAM181AQ8N9Y4 354 aa5.83□□□□□ -1.48
SMC1A-202ENST00000375340 ARL5BQ96KC2 179 aa5.83□□□□□ -1.48
SMC1A-202ENST00000375340 COL4A6Q14031 1691 aa5.83□□□□□ -1.48
SMC1A-202ENST00000375340 ADAM10O14672 748 aa5.83□□□□□ -1.48
SMC1A-202ENST00000375340 B3GALNT1O75752 331 aa5.83□□□□□ -1.48
SMC1A-202ENST00000375340 HAAOP46952 286 aa5.83□□□□□ -1.48
SMC1A-202ENST00000375340 SRPXP78539 464 aa5.83□□□□□ -1.48
SMC1A-202ENST00000375340 MPPED2Q15777 294 aa5.83□□□□□ -1.48
SMC1A-202ENST00000375340 DCAF12Q5T6F0 453 aa5.83□□□□□ -1.48
SMC1A-202ENST00000375340 RABEPKQ7Z6M1 372 aa5.83□□□□□ -1.48
SMC1A-202ENST00000375340 RDH5Q92781 318 aa5.83□□□□□ -1.48
SMC1A-202ENST00000375340 KIRREL1Q96J84 757 aa5.83□□□□□ -1.48
SMC1A-202ENST00000375340 FNDC1Q4ZHG4 1894 aaPredicted RBP5.83□□□□□ -1.48
SMC1A-202ENST00000375340 GPR37O15354 613 aa5.83□□□□□ -1.48
SMC1A-202ENST00000375340 ADAM20O43506 726 aa5.83□□□□□ -1.48
SMC1A-202ENST00000375340 F2RL1P55085 397 aa5.83□□□□□ -1.48
SMC1A-202ENST00000375340 TMEM255AQ5JRV8 349 aa5.83□□□□□ -1.48
SMC1A-202ENST00000375340 MRGPRX4Q96LA9 322 aa5.83□□□□□ -1.48
SMC1A-202ENST00000375340 A0A087WV48 116 aa5.83□□□□□ -1.48
SMC1A-202ENST00000375340 H3BP45 60 aa5.83□□□□□ -1.48
SMC1A-202ENST00000375340 IRF2P14316 349 aa5.83□□□□□ -1.48
SMC1A-202ENST00000375340 TCN2P20062 427 aa5.83□□□□□ -1.48
SMC1A-202ENST00000375340 HBG1P69891 147 aa5.83□□□□□ -1.48
SMC1A-202ENST00000375340 HBG2P69892 147 aa5.83□□□□□ -1.48
SMC1A-202ENST00000375340 ZNF787Q6DD87 383 aa5.83□□□□□ -1.48
SMC1A-202ENST00000375340 Q7L0L9 218 aa5.83□□□□□ -1.48
SMC1A-202ENST00000375340 WDR5BQ86VZ2 330 aa5.83□□□□□ -1.48
SMC1A-202ENST00000375340 DTWD2Q8NBA8 298 aa5.83□□□□□ -1.48
SMC1A-202ENST00000375340 TWSG1Q9GZX9 223 aa5.83□□□□□ -1.48
SMC1A-202ENST00000375340 C17orf51A8MQB3 221 aa5.82□□□□□ -1.48
SMC1A-202ENST00000375340 SOX15O60248 233 aa5.82□□□□□ -1.48
SMC1A-202ENST00000375340 CST7O76096 145 aa5.82□□□□□ -1.48
SMC1A-202ENST00000375340 EPPINO95925 133 aa5.82□□□□□ -1.48
SMC1A-202ENST00000375340 FABP1P07148 127 aa5.82□□□□□ -1.48
SMC1A-202ENST00000375340 OR5AC1P0C628 307 aa5.82□□□□□ -1.48
SMC1A-202ENST00000375340 FAM157BP0CG42 384 aa5.82□□□□□ -1.48
SMC1A-202ENST00000375340 PNLIPRP3Q17RR3 467 aa5.82□□□□□ -1.48
SMC1A-202ENST00000375340 SLC25A38Q96DW6 304 aa5.82□□□□□ -1.48
SMC1A-202ENST00000375340 ZNF764Q96H86 408 aaPredicted RBP5.82□□□□□ -1.48
SMC1A-202ENST00000375340 GHITMQ9H3K2 345 aa5.82□□□□□ -1.48
SMC1A-202ENST00000375340 ZNF576Q9H609 170 aa5.82□□□□□ -1.48
SMC1A-202ENST00000375340 ZMIZ1Q9ULJ6 1067 aa5.82□□□□□ -1.48
SMC1A-202ENST00000375340 RNF150Q9ULK6 438 aa5.82□□□□□ -1.48
SMC1A-202ENST00000375340 OSGIN2Q9Y236 505 aa5.82□□□□□ -1.48
SMC1A-202ENST00000375340 PPP1R2P9O14990 202 aa5.82□□□□□ -1.48
SMC1A-202ENST00000375340 ST8SIA3O43173 380 aa5.82□□□□□ -1.48
SMC1A-202ENST00000375340 ZIC2O95409 532 aaPredicted RBP5.82□□□□□ -1.48
SMC1A-202ENST00000375340 RAG2P55895 527 aa5.82□□□□□ -1.48
SMC1A-202ENST00000375340 ZP1P60852 638 aa5.82□□□□□ -1.48
SMC1A-202ENST00000375340 KISS1Q15726 138 aa5.82□□□□□ -1.48
SMC1A-202ENST00000375340 ZNF774Q6NX45 483 aa5.82□□□□□ -1.48
SMC1A-202ENST00000375340 ABHD5Q8WTS1 349 aa5.82□□□□□ -1.48
SMC1A-202ENST00000375340 PTPMT1Q8WUK0 201 aaPredicted RBP5.82□□□□□ -1.48
SMC1A-202ENST00000375340 F6UZH7 168 aa5.82□□□□□ -1.48
SMC1A-202ENST00000375340 H0Y8G0 127 aa5.82□□□□□ -1.48
SMC1A-202ENST00000375340 ZNF816Q0VGE8 651 aaPredicted RBP5.82□□□□□ -1.48
SMC1A-202ENST00000375340 SPANXN5Q5MJ07 72 aa5.82□□□□□ -1.48
SMC1A-202ENST00000375340 CLEC18BQ6UXF7 455 aa5.82□□□□□ -1.48
SMC1A-202ENST00000375340 RPUSD4Q96CM3 377 aaKnown RBP5.82□□□□□ -1.48
SMC1A-202ENST00000375340 LANCL2Q9NS86 450 aa5.82□□□□□ -1.48
SMC1A-202ENST00000375340 SLCO1B1Q9Y6L6 691 aa5.82□□□□□ -1.48
SMC1A-202ENST00000375340 A8MXE2 369 aa5.82□□□□□ -1.48
SMC1A-202ENST00000375340 C17orf112F2Z3M2 114 aa5.82□□□□□ -1.48
SMC1A-202ENST00000375340 OR8U8P0C7N1 319 aa5.82□□□□□ -1.48
SMC1A-202ENST00000375340 PATE4P0C8F1 98 aa5.82□□□□□ -1.48
SMC1A-202ENST00000375340 CT45A8P0DMV1 189 aa5.82□□□□□ -1.48
SMC1A-202ENST00000375340 CT45A9P0DMV2 189 aa5.82□□□□□ -1.48
SMC1A-202ENST00000375340 MGST1P10620 155 aaKnown RBP5.82□□□□□ -1.48
SMC1A-202ENST00000375340 CT45A2Q5DJT8 189 aa5.82□□□□□ -1.48
SMC1A-202ENST00000375340 ISOC2Q96AB3 205 aa5.82□□□□□ -1.48
SMC1A-202ENST00000375340 AMELYQ99218 206 aa5.82□□□□□ -1.48
SMC1A-202ENST00000375340 UTP23Q9BRU9 249 aaKnown RBP5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms