RNA–Protein interactions for RNA: ENST00000374877.7

CCDC40-203, Transcript of coiled-coil domain containing 40, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CCDC40, Length 3,544 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-203ENST00000374877 LSM5Q9Y4Y9 91 aaKnown RBP9.79□□□□□ -0.84
CCDC40-203ENST00000374877 SPEGQ15772 3267 aa9.79□□□□□ -0.84
CCDC40-203ENST00000374877 A0A1W2PPH5 198 aa9.78□□□□□ -0.84
CCDC40-203ENST00000374877 UBE2CO00762 179 aa9.78□□□□□ -0.84
CCDC40-203ENST00000374877 TSPAN2O60636 221 aa9.78□□□□□ -0.84
CCDC40-203ENST00000374877 CST4P01036 141 aa9.78□□□□□ -0.84
CCDC40-203ENST00000374877 ZNF883P0CG24 379 aa9.78□□□□□ -0.84
CCDC40-203ENST00000374877 FCGR2CP31995 323 aa9.78□□□□□ -0.84
CCDC40-203ENST00000374877 SNU13P55769 128 aaKnown RBP9.78□□□□□ -0.84
CCDC40-203ENST00000374877 WDR74Q6RFH5 385 aaPredicted RBP9.78□□□□□ -0.84
CCDC40-203ENST00000374877 CLEC9AQ6UXN8 241 aa9.78□□□□□ -0.84
CCDC40-203ENST00000374877 KMT5CQ86Y97 462 aa9.78□□□□□ -0.84
CCDC40-203ENST00000374877 LURAP1LQ8IV03 231 aa9.78□□□□□ -0.84
CCDC40-203ENST00000374877 PARP11Q9NR21 331 aa9.78□□□□□ -0.84
CCDC40-203ENST00000374877 PLA2G2EQ9NZK7 142 aa9.78□□□□□ -0.84
CCDC40-203ENST00000374877 ASH2LQ9UBL3 628 aa9.78□□□□□ -0.84
CCDC40-203ENST00000374877 GHRLQ9UBU3 117 aa9.78□□□□□ -0.84
CCDC40-203ENST00000374877 hCG_1809904A0A1W2PP81 198 aa9.78□□□□□ -0.84
CCDC40-203ENST00000374877 A0A1W2PR64 198 aa9.78□□□□□ -0.84
CCDC40-203ENST00000374877 A0A1W2PRV1 198 aa9.78□□□□□ -0.84
CCDC40-203ENST00000374877 NME2P1O60361 137 aa9.78□□□□□ -0.84
CCDC40-203ENST00000374877 MT-ND4LP03901 98 aa9.78□□□□□ -0.84
CCDC40-203ENST00000374877 RBMXP38159 391 aaKnown RBP9.78□□□□□ -0.84
CCDC40-203ENST00000374877 GABRA4P48169 554 aa9.78□□□□□ -0.84
CCDC40-203ENST00000374877 OR1D5P58170 312 aa9.78□□□□□ -0.84
CCDC40-203ENST00000374877 HSF1Q00613 529 aa9.78□□□□□ -0.84
CCDC40-203ENST00000374877 NPRL2Q8WTW4 380 aa9.78□□□□□ -0.84
CCDC40-203ENST00000374877 NAT6Q93015 286 aa9.78□□□□□ -0.84
CCDC40-203ENST00000374877 KCNK17Q96T54 332 aa9.78□□□□□ -0.84
CCDC40-203ENST00000374877 MIOXQ9UGB7 285 aa9.78□□□□□ -0.84
CCDC40-203ENST00000374877 VDAC3Q9Y277 283 aa9.78□□□□□ -0.84
CCDC40-203ENST00000374877 PCDH15Q96QU1 1955 aa9.78□□□□□ -0.84
CCDC40-203ENST00000374877 IGHV5-51A0A0C4DH38 117 aa9.78□□□□□ -0.84
CCDC40-203ENST00000374877 C7orf77A4D0Y5 90 aa9.78□□□□□ -0.84
CCDC40-203ENST00000374877 H3BML4 177 aa9.78□□□□□ -0.84
CCDC40-203ENST00000374877 TOX3O15405 576 aaPredicted RBP9.78□□□□□ -0.84
CCDC40-203ENST00000374877 NQO2P16083 231 aa9.78□□□□□ -0.84
CCDC40-203ENST00000374877 ZNF708P17019 499 aa9.78□□□□□ -0.84
CCDC40-203ENST00000374877 BIDP55957 195 aa9.78□□□□□ -0.84
CCDC40-203ENST00000374877 OR2B8PP59922 312 aa9.78□□□□□ -0.84
CCDC40-203ENST00000374877 NSDHLQ15738 373 aa9.78□□□□□ -0.84
CCDC40-203ENST00000374877 PCK2Q16822 640 aa9.78□□□□□ -0.84
CCDC40-203ENST00000374877 AADACL3Q5VUY0 350 aa9.78□□□□□ -0.84
CCDC40-203ENST00000374877 ADAM5Q6NVV9 412 aa9.78□□□□□ -0.84
CCDC40-203ENST00000374877 PNLDC1Q8NA58 520 aaKnown RBP9.78□□□□□ -0.84
CCDC40-203ENST00000374877 EIF5A2Q9GZV4 153 aaKnown RBP9.78□□□□□ -0.84
CCDC40-203ENST00000374877 SPACA1Q9HBV2 294 aa9.78□□□□□ -0.84
CCDC40-203ENST00000374877 B3GALT5Q9Y2C3 310 aa9.78□□□□□ -0.84
CCDC40-203ENST00000374877 AMDHD2Q9Y303 409 aa9.78□□□□□ -0.84
CCDC40-203ENST00000374877 TIMM10BQ9Y5J6 103 aa9.78□□□□□ -0.84
CCDC40-203ENST00000374877 LY6G6EA0A0G2JKS1 128 aa9.77□□□□□ -0.84
CCDC40-203ENST00000374877 A0A1W2PQD3 144 aa9.77□□□□□ -0.84
CCDC40-203ENST00000374877 ZNF878C9JN71 531 aa9.77□□□□□ -0.84
CCDC40-203ENST00000374877 FTCDNL1E5RQL4 147 aa9.77□□□□□ -0.84
CCDC40-203ENST00000374877 TMEM33P57088 247 aa9.77□□□□□ -0.84
CCDC40-203ENST00000374877 MIDNQ504T8 468 aa9.77□□□□□ -0.84
CCDC40-203ENST00000374877 H1FNTQ75WM6 255 aaPredicted RBP9.77□□□□□ -0.84
CCDC40-203ENST00000374877 PEG10Q86TG7 708 aaKnown RBP9.77□□□□□ -0.84
CCDC40-203ENST00000374877 OR5AS1Q8N127 324 aa9.77□□□□□ -0.84
CCDC40-203ENST00000374877 OR9K2Q8NGE7 335 aa9.77□□□□□ -0.84
CCDC40-203ENST00000374877 OR56B1Q8NGI3 324 aa9.77□□□□□ -0.84
CCDC40-203ENST00000374877 OR51T1Q8NGJ9 327 aa9.77□□□□□ -0.84
CCDC40-203ENST00000374877 OR10S1Q8NGN2 331 aa9.77□□□□□ -0.84
CCDC40-203ENST00000374877 NUDT16L1Q9BRJ7 211 aaKnown RBP9.77□□□□□ -0.84
CCDC40-203ENST00000374877 URM1Q9BTM9 101 aaKnown RBP9.77□□□□□ -0.84
CCDC40-203ENST00000374877 WWTR1Q9GZV5 400 aa9.77□□□□□ -0.84
CCDC40-203ENST00000374877 GPR84Q9NQS5 396 aa9.77□□□□□ -0.84
CCDC40-203ENST00000374877 ZNF701Q9NV72 531 aaPredicted RBP9.77□□□□□ -0.84
CCDC40-203ENST00000374877 COPS7AQ9UBW8 275 aa9.77□□□□□ -0.84
CCDC40-203ENST00000374877 SRPK3Q9UPE1 567 aa9.77□□□□□ -0.84
CCDC40-203ENST00000374877 C14orf166Q9Y224 244 aaKnown RBP9.77□□□□□ -0.84
CCDC40-203ENST00000374877 U3KQA8 63 aa9.77□□□□□ -0.84
CCDC40-203ENST00000374877 FAM157AC9JC47 383 aa9.77□□□□□ -0.85
CCDC40-203ENST00000374877 MPLP40238 635 aa9.77□□□□□ -0.85
CCDC40-203ENST00000374877 HGFACQ04756 655 aa9.77□□□□□ -0.85
CCDC40-203ENST00000374877 TMEM268Q5VZI3 342 aa9.77□□□□□ -0.85
CCDC40-203ENST00000374877 C16orf47Q6ZP98 133 aaPredicted RBP9.77□□□□□ -0.85
CCDC40-203ENST00000374877 ZNF775Q96BV0 537 aaPredicted RBP9.77□□□□□ -0.85
CCDC40-203ENST00000374877 OR5B2Q96R09 309 aa9.77□□□□□ -0.85
CCDC40-203ENST00000374877 CNTNAP3Q9BZ76 1288 aa9.77□□□□□ -0.85
CCDC40-203ENST00000374877 EGLN1Q9GZT9 426 aa9.77□□□□□ -0.85
CCDC40-203ENST00000374877 FBLN5Q9UBX5 448 aa9.77□□□□□ -0.85
CCDC40-203ENST00000374877 KMT2EQ8IZD2 1858 aa9.77□□□□□ -0.85
CCDC40-203ENST00000374877 PHF3Q92576 2039 aaKnown RBP9.77□□□□□ -0.85
CCDC40-203ENST00000374877 TRBV23-1A0A0A0MS06 115 aa9.77□□□□□ -0.85
CCDC40-203ENST00000374877 A0A1B0GV50 99 aa9.77□□□□□ -0.85
CCDC40-203ENST00000374877 PMS2P1A4D2B8 440 aa9.77□□□□□ -0.85
CCDC40-203ENST00000374877 CEACAM18A8MTB9 384 aa9.77□□□□□ -0.85
CCDC40-203ENST00000374877 JTBO76095 146 aa9.77□□□□□ -0.85
CCDC40-203ENST00000374877 DCAF7P61962 342 aa9.77□□□□□ -0.85
CCDC40-203ENST00000374877 SPEM2Q0P670 501 aa9.77□□□□□ -0.85
CCDC40-203ENST00000374877 CHRFAM7AQ494W8 412 aa9.77□□□□□ -0.85
CCDC40-203ENST00000374877 FAM24BQ8N5W8 94 aa9.77□□□□□ -0.85
CCDC40-203ENST00000374877 FNDC9Q8TBE3 224 aa9.77□□□□□ -0.85
CCDC40-203ENST00000374877 C1orf147Q96MC9 270 aaPredicted RBP9.77□□□□□ -0.85
CCDC40-203ENST00000374877 FSCN3Q9NQT6 498 aa9.77□□□□□ -0.85
CCDC40-203ENST00000374877 CUTCQ9NTM9 273 aa9.77□□□□□ -0.85
CCDC40-203ENST00000374877 OSGIN2Q9Y236 505 aa9.77□□□□□ -0.85
CCDC40-203ENST00000374877 TMEM131Q92545 1883 aa9.76□□□□□ -0.85
CCDC40-203ENST00000374877 PATE3B3GLJ2 98 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms