RNA–Protein interactions for RNA: ENST00000374732.7

USP48-203, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2 BASIC

Gene USP48, Length 3,037 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-203ENST00000374732 XCR1P46094 333 aa6.98□□□□□ -1.29
USP48-203ENST00000374732 FUT6P51993 359 aa6.98□□□□□ -1.29
USP48-203ENST00000374732 TAS2R30P59541 319 aa6.98□□□□□ -1.29
USP48-203ENST00000374732 ZNF74Q16587 644 aa6.98□□□□□ -1.29
USP48-203ENST00000374732 B3GNTL1Q67FW5 361 aaPredicted RBP6.98□□□□□ -1.29
USP48-203ENST00000374732 ARL9Q6T311 187 aa6.98□□□□□ -1.29
USP48-203ENST00000374732 LCTLQ6UWM7 567 aa6.98□□□□□ -1.29
USP48-203ENST00000374732 ZNF788Q6ZQV5 615 aa6.98□□□□□ -1.29
USP48-203ENST00000374732 SLC38A9Q8NBW4 561 aa6.98□□□□□ -1.29
USP48-203ENST00000374732 OR2T27Q8NH04 317 aa6.98□□□□□ -1.29
USP48-203ENST00000374732 PELI1Q96FA3 418 aa6.98□□□□□ -1.29
USP48-203ENST00000374732 BTF3L4Q96K17 158 aa6.98□□□□□ -1.29
USP48-203ENST00000374732 C20orf141Q9NUB4 165 aa6.98□□□□□ -1.29
USP48-203ENST00000374732 PIPOXQ9P0Z9 390 aa6.98□□□□□ -1.29
USP48-203ENST00000374732 ING1Q9UK53 422 aaPredicted RBP6.98□□□□□ -1.29
USP48-203ENST00000374732 POMT2Q9UKY4 750 aa6.98□□□□□ -1.29
USP48-203ENST00000374732 MMP17Q9ULZ9 603 aa6.98□□□□□ -1.29
USP48-203ENST00000374732 CARHSP1Q9Y2V2 147 aaKnown RBP6.98□□□□□ -1.29
USP48-203ENST00000374732 AK6Q9Y3D8 172 aaKnown RBP6.98□□□□□ -1.29
USP48-203ENST00000374732 TIMM10BQ9Y5J6 103 aa6.98□□□□□ -1.29
USP48-203ENST00000374732 PCYT1BQ9Y5K3 369 aaPredicted RBP6.98□□□□□ -1.29
USP48-203ENST00000374732 TRIP12Q14669 1992 aaPredicted RBP6.97□□□□□ -1.29
USP48-203ENST00000374732 SCN10AQ9Y5Y9 1956 aa6.97□□□□□ -1.29
USP48-203ENST00000374732 PLXND1Q9Y4D7 1925 aa6.97□□□□□ -1.29
USP48-203ENST00000374732 MYO18AQ92614 2054 aaKnown RBP6.97□□□□□ -1.29
USP48-203ENST00000374732 A0A1W2PR80 420 aa6.97□□□□□ -1.29
USP48-203ENST00000374732 HCRTO43612 131 aa6.97□□□□□ -1.29
USP48-203ENST00000374732 STK16O75716 305 aa6.97□□□□□ -1.29
USP48-203ENST00000374732 HSD17B1P14061 328 aa6.97□□□□□ -1.29
USP48-203ENST00000374732 GRNP28799 593 aaKnown RBP6.97□□□□□ -1.29
USP48-203ENST00000374732 GABRA2P47869 451 aa6.97□□□□□ -1.29
USP48-203ENST00000374732 ZNF121P58317 390 aaPredicted RBP6.97□□□□□ -1.29
USP48-203ENST00000374732 MRPS34P82930 218 aaKnown RBP6.97□□□□□ -1.29
USP48-203ENST00000374732 OC90Q02509 493 aaPredicted RBP6.97□□□□□ -1.29
USP48-203ENST00000374732 ZNF415Q09FC8 603 aa6.97□□□□□ -1.29
USP48-203ENST00000374732 FTMTQ8N4E7 242 aa6.97□□□□□ -1.29
USP48-203ENST00000374732 STPG4Q8N801 248 aa6.97□□□□□ -1.29
USP48-203ENST00000374732 NAT16Q8N8M0 369 aa6.97□□□□□ -1.29
USP48-203ENST00000374732 OR7G2Q8NG99 324 aa6.97□□□□□ -1.29
USP48-203ENST00000374732 IL17DQ8TAD2 202 aa6.97□□□□□ -1.29
USP48-203ENST00000374732 FCAMRQ8WWV6 532 aa6.97□□□□□ -1.29
USP48-203ENST00000374732 DCUN1D4Q92564 292 aa6.97□□□□□ -1.29
USP48-203ENST00000374732 FAM46AQ96IP4 442 aaKnown RBP6.97□□□□□ -1.29
USP48-203ENST00000374732 SYT3Q9BQG1 590 aa6.97□□□□□ -1.29
USP48-203ENST00000374732 ZNF226Q9NYT6 803 aa6.97□□□□□ -1.29
USP48-203ENST00000374732 FBXL7Q9UJT9 491 aa6.97□□□□□ -1.29
USP48-203ENST00000374732 RNF6Q9Y252 685 aa6.97□□□□□ -1.29
USP48-203ENST00000374732 PRSS51A0A1B0GVH4 220 aa6.97□□□□□ -1.29
USP48-203ENST00000374732 SLC38A8A6NNN8 435 aa6.97□□□□□ -1.29
USP48-203ENST00000374732 CLIC3O95833 236 aa6.97□□□□□ -1.29
USP48-203ENST00000374732 ESR1P03372 595 aa6.97□□□□□ -1.29
USP48-203ENST00000374732 RAP2AP10114 183 aa6.97□□□□□ -1.29
USP48-203ENST00000374732 USF1P22415 310 aaPredicted RBP6.97□□□□□ -1.29
USP48-203ENST00000374732 GABRA5P31644 462 aa6.97□□□□□ -1.29
USP48-203ENST00000374732 CD68P34810 354 aaPredicted RBP6.97□□□□□ -1.29
USP48-203ENST00000374732 PSG4Q00888 419 aa6.97□□□□□ -1.29
USP48-203ENST00000374732 TGIF1Q15583 401 aa6.97□□□□□ -1.29
USP48-203ENST00000374732 C3AR1Q16581 482 aa6.97□□□□□ -1.29
USP48-203ENST00000374732 TMEM201Q5SNT2 666 aa6.97□□□□□ -1.29
USP48-203ENST00000374732 TMEM225Q6GV28 225 aa6.97□□□□□ -1.29
USP48-203ENST00000374732 TOMM20LQ6UXN7 152 aa6.97□□□□□ -1.29
USP48-203ENST00000374732 IL17RELQ6ZVW7 336 aa6.97□□□□□ -1.29
USP48-203ENST00000374732 ZNF367Q7RTV3 350 aa6.97□□□□□ -1.29
USP48-203ENST00000374732 RNF144BQ7Z419 303 aa6.97□□□□□ -1.29
USP48-203ENST00000374732 WDR53Q7Z5U6 358 aaPredicted RBP6.97□□□□□ -1.29
USP48-203ENST00000374732 ZNF440Q8IYI8 595 aa6.97□□□□□ -1.29
USP48-203ENST00000374732 Q8NA96 180 aa6.97□□□□□ -1.29
USP48-203ENST00000374732 EEF1AKMT1Q8WVE0 214 aa6.97□□□□□ -1.29
USP48-203ENST00000374732 SARAFQ96BY9 339 aa6.97□□□□□ -1.29
USP48-203ENST00000374732 MED28Q9H204 178 aa6.97□□□□□ -1.29
USP48-203ENST00000374732 NKX2-4Q9H2Z4 354 aa6.97□□□□□ -1.29
USP48-203ENST00000374732 WDCPQ9H6R7 721 aa6.97□□□□□ -1.29
USP48-203ENST00000374732 MAGIXQ9H6Y5 334 aa6.97□□□□□ -1.29
USP48-203ENST00000374732 ERG28Q9UKR5 140 aa6.97□□□□□ -1.29
USP48-203ENST00000374732 LAMTOR2Q9Y2Q5 125 aa6.97□□□□□ -1.29
USP48-203ENST00000374732 SLC1A7O00341 560 aa6.96□□□□□ -1.29
USP48-203ENST00000374732 ZNF217O75362 1048 aa6.96□□□□□ -1.29
USP48-203ENST00000374732 IL2RAP01589 272 aa6.96□□□□□ -1.29
USP48-203ENST00000374732 OR4A8P0C604 315 aa6.96□□□□□ -1.29
USP48-203ENST00000374732 DVL1P1P54792 670 aaPredicted RBP6.96□□□□□ -1.29
USP48-203ENST00000374732 RAP2BP61225 183 aa6.96□□□□□ -1.29
USP48-203ENST00000374732 RPL8P62917 257 aaKnown RBP6.96□□□□□ -1.29
USP48-203ENST00000374732 RHOGP84095 191 aa6.96□□□□□ -1.29
USP48-203ENST00000374732 AKR1C1Q04828 323 aa6.96□□□□□ -1.29
USP48-203ENST00000374732 EIF2B1Q14232 305 aaKnown RBP6.96□□□□□ -1.29
USP48-203ENST00000374732 OR10J3Q5JRS4 329 aa6.96□□□□□ -1.29
USP48-203ENST00000374732 FAM71E1Q6IPT2 247 aa6.96□□□□□ -1.29
USP48-203ENST00000374732 BTNL8Q6UX41 500 aa6.96□□□□□ -1.29
USP48-203ENST00000374732 BLNKQ8WV28 456 aa6.96□□□□□ -1.29
USP48-203ENST00000374732 CANT1Q8WVQ1 401 aa6.96□□□□□ -1.29
USP48-203ENST00000374732 MALSU1Q96EH3 234 aa6.96□□□□□ -1.29
USP48-203ENST00000374732 PLPPR2Q96GM1 343 aa6.96□□□□□ -1.29
USP48-203ENST00000374732 IP6K3Q96PC2 410 aa6.96□□□□□ -1.29
USP48-203ENST00000374732 C11orf54Q9H0W9 315 aaPredicted RBP6.96□□□□□ -1.29
USP48-203ENST00000374732 GOLGA2P5Q9HBQ8 144 aa6.96□□□□□ -1.29
USP48-203ENST00000374732 ENTPD2Q9Y5L3 495 aa6.96□□□□□ -1.29
USP48-203ENST00000374732 TRAV19A0A0A6YYK7 116 aa6.96□□□□□ -1.3
USP48-203ENST00000374732 GAGE10A6NGK3 116 aa6.96□□□□□ -1.3
USP48-203ENST00000374732 CXorf49A8MYA2 514 aaPredicted RBP6.96□□□□□ -1.3
USP48-203ENST00000374732 PRAF2O60831 178 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms