RNA–Protein interactions for RNA: ENST00000374730.2

USP48-202, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-202ENST00000374730 TMEM244Q5VVB8 128 aa4.18□□□□□ -1.74
USP48-202ENST00000374730 GLT8D1Q68CQ7 371 aa4.18□□□□□ -1.74
USP48-202ENST00000374730 TMEM225Q6GV28 225 aa4.18□□□□□ -1.74
USP48-202ENST00000374730 OR7E24Q6IFN5 339 aa4.18□□□□□ -1.74
USP48-202ENST00000374730 C3orf33Q6P1S2 294 aa4.18□□□□□ -1.74
USP48-202ENST00000374730 MTFR2Q6P444 385 aa4.18□□□□□ -1.74
USP48-202ENST00000374730 GUSBP11Q6P575 273 aa4.18□□□□□ -1.74
USP48-202ENST00000374730 TMEM81Q6P7N7 255 aa4.18□□□□□ -1.74
USP48-202ENST00000374730 NHLRC1Q6VVB1 395 aa4.18□□□□□ -1.74
USP48-202ENST00000374730 GLDNQ6ZMI3 551 aaPredicted RBP4.18□□□□□ -1.74
USP48-202ENST00000374730 C16orf47Q6ZP98 133 aaPredicted RBP4.18□□□□□ -1.74
USP48-202ENST00000374730 SHISA6Q6ZSJ9 500 aa4.18□□□□□ -1.74
USP48-202ENST00000374730 UTS2BQ765I0 119 aa4.18□□□□□ -1.74
USP48-202ENST00000374730 SLC35D2Q76EJ3 337 aa4.18□□□□□ -1.74
USP48-202ENST00000374730 NDUFAF7Q7L592 441 aa4.18□□□□□ -1.74
USP48-202ENST00000374730 HDDC2Q7Z4H3 204 aa4.18□□□□□ -1.74
USP48-202ENST00000374730 MDGA2Q7Z553 956 aa4.18□□□□□ -1.74
USP48-202ENST00000374730 WDR5BQ86VZ2 330 aa4.18□□□□□ -1.74
USP48-202ENST00000374730 LYPD6Q86Y78 171 aa4.18□□□□□ -1.74
USP48-202ENST00000374730 SERPINA12Q8IW75 414 aa4.18□□□□□ -1.74
USP48-202ENST00000374730 CDH26Q8IXH8 852 aa4.18□□□□□ -1.74
USP48-202ENST00000374730 UBALD2Q8IYN6 164 aa4.18□□□□□ -1.74
USP48-202ENST00000374730 OR8H3Q8N146 312 aa4.18□□□□□ -1.74
USP48-202ENST00000374730 BMPERQ8N8U9 685 aa4.18□□□□□ -1.74
USP48-202ENST00000374730 FADS6Q8N9I5 356 aa4.18□□□□□ -1.74
USP48-202ENST00000374730 SLC38A9Q8NBW4 561 aa4.18□□□□□ -1.74
USP48-202ENST00000374730 OR1J4Q8NGS1 313 aa4.18□□□□□ -1.74
USP48-202ENST00000374730 SLC22A8Q8TCC7 542 aa4.18□□□□□ -1.74
USP48-202ENST00000374730 ZNF431Q8TF32 576 aaPredicted RBP4.18□□□□□ -1.74
USP48-202ENST00000374730 RNF133Q8WVZ7 376 aa4.18□□□□□ -1.74
USP48-202ENST00000374730 PTX4Q96A99 478 aa4.18□□□□□ -1.74
USP48-202ENST00000374730 FAM3DQ96BQ1 224 aa4.18□□□□□ -1.74
USP48-202ENST00000374730 ARL5BQ96KC2 179 aa4.18□□□□□ -1.74
USP48-202ENST00000374730 ULBP3Q9BZM4 244 aa4.18□□□□□ -1.74
USP48-202ENST00000374730 ZNF436Q9C0F3 470 aaPredicted RBP4.18□□□□□ -1.74
USP48-202ENST00000374730 MOB1AQ9H8S9 216 aa4.18□□□□□ -1.74
USP48-202ENST00000374730 SCPEP1Q9HB40 452 aa4.18□□□□□ -1.74
USP48-202ENST00000374730 GPN1Q9HCN4 374 aaPredicted RBP4.18□□□□□ -1.74
USP48-202ENST00000374730 DIABLOQ9NR28 239 aa4.18□□□□□ -1.74
USP48-202ENST00000374730 SERINC1Q9NRX5 453 aa4.18□□□□□ -1.74
USP48-202ENST00000374730 B3GNT2Q9NY97 397 aa4.18□□□□□ -1.74
USP48-202ENST00000374730 KLRF1Q9NZS2 232 aa4.18□□□□□ -1.74
USP48-202ENST00000374730 B3GAT1Q9P2W7 334 aa4.18□□□□□ -1.74
USP48-202ENST00000374730 KLK11Q9UBX7 282 aa4.18□□□□□ -1.74
USP48-202ENST00000374730 ZNF107Q9UII5 783 aaPredicted RBP4.18□□□□□ -1.74
USP48-202ENST00000374730 ZNF222Q9UK12 451 aa4.18□□□□□ -1.74
USP48-202ENST00000374730 NXT1Q9UKK6 140 aaKnown RBP4.18□□□□□ -1.74
USP48-202ENST00000374730 OR52A1Q9UKL2 312 aa4.18□□□□□ -1.74
USP48-202ENST00000374730 ELF5Q9UKW6 265 aaPredicted RBP4.18□□□□□ -1.74
USP48-202ENST00000374730 SLC22A13Q9Y226 551 aa4.18□□□□□ -1.74
USP48-202ENST00000374730 RPH3AQ9Y2J0 694 aaPredicted RBP4.18□□□□□ -1.74
USP48-202ENST00000374730 WIF1Q9Y5W5 379 aa4.18□□□□□ -1.74
USP48-202ENST00000374730 NCOA6Q14686 2063 aaPredicted RBP4.17□□□□□ -1.74
USP48-202ENST00000374730 A0A087WZY1 265 aa4.17□□□□□ -1.74
USP48-202ENST00000374730 LOC102725191A0A1B0GVB3 256 aa4.17□□□□□ -1.74
USP48-202ENST00000374730 A0A1W2PQ72 361 aa4.17□□□□□ -1.74
USP48-202ENST00000374730 CPED1A4D0V7 1026 aa4.17□□□□□ -1.74
USP48-202ENST00000374730 A6NL46 340 aa4.17□□□□□ -1.74
USP48-202ENST00000374730 G3V3Q6 166 aa4.17□□□□□ -1.74
USP48-202ENST00000374730 H0YC42 278 aa4.17□□□□□ -1.74
USP48-202ENST00000374730 ARPC1BO15143 372 aaKnown RBP4.17□□□□□ -1.74
USP48-202ENST00000374730 AKR7A2O43488 359 aa4.17□□□□□ -1.74
USP48-202ENST00000374730 TRAF3IP2O43734 574 aaPredicted RBP4.17□□□□□ -1.74
USP48-202ENST00000374730 EFNA2O43921 213 aa4.17□□□□□ -1.74
USP48-202ENST00000374730 CREBL2O60519 120 aaPredicted RBP4.17□□□□□ -1.74
USP48-202ENST00000374730 AKAIN1P0CW23 69 aa4.17□□□□□ -1.74
USP48-202ENST00000374730 TDGF1P13385 188 aa4.17□□□□□ -1.74
USP48-202ENST00000374730 DNASE1P24855 282 aa4.17□□□□□ -1.74
USP48-202ENST00000374730 HTR2CP28335 458 aa4.17□□□□□ -1.74
USP48-202ENST00000374730 HSD11B1P28845 292 aa4.17□□□□□ -1.74
USP48-202ENST00000374730 PRSS3P35030 304 aa4.17□□□□□ -1.74
USP48-202ENST00000374730 EIF1P41567 113 aaKnown RBP4.17□□□□□ -1.74
USP48-202ENST00000374730 HTR2BP41595 481 aa4.17□□□□□ -1.74
USP48-202ENST00000374730 PCP4P48539 62 aa4.17□□□□□ -1.74
USP48-202ENST00000374730 DNASE1L1P49184 302 aa4.17□□□□□ -1.74
USP48-202ENST00000374730 DHPSP49366 369 aaPredicted RBP4.17□□□□□ -1.74
USP48-202ENST00000374730 P2RY4P51582 365 aa4.17□□□□□ -1.74
USP48-202ENST00000374730 EFNB2P52799 333 aa4.17□□□□□ -1.74
USP48-202ENST00000374730 TAS2R19P59542 299 aa4.17□□□□□ -1.74
USP48-202ENST00000374730 ZP1P60852 638 aa4.17□□□□□ -1.74
USP48-202ENST00000374730 SNRPD2P62316 118 aaKnown RBP4.17□□□□□ -1.74
USP48-202ENST00000374730 FMODQ06828 376 aa4.17□□□□□ -1.74
USP48-202ENST00000374730 PMPCAQ10713 525 aa4.17□□□□□ -1.74
USP48-202ENST00000374730 PLA2G7Q13093 441 aa4.17□□□□□ -1.74
USP48-202ENST00000374730 MYBPHQ13203 477 aa4.17□□□□□ -1.74
USP48-202ENST00000374730 EIF3IQ13347 325 aaKnown RBP4.17□□□□□ -1.74
USP48-202ENST00000374730 SNTA1Q13424 505 aa4.17□□□□□ -1.74
USP48-202ENST00000374730 TRA2AQ13595 282 aaKnown RBP eCLIP4.17□□□□□ -1.74
USP48-202ENST00000374730 IL11RAQ14626 422 aa4.17□□□□□ -1.74
USP48-202ENST00000374730 PCGF3Q3KNV8 242 aa4.17□□□□□ -1.74
USP48-202ENST00000374730 C2orf76Q3KRA6 126 aa4.17□□□□□ -1.74
USP48-202ENST00000374730 THEM4Q5T1C6 240 aa4.17□□□□□ -1.74
USP48-202ENST00000374730 C6orf183Q5T699 404 aa4.17□□□□□ -1.74
USP48-202ENST00000374730 SLC25A25Q6KCM7 469 aa4.17□□□□□ -1.74
USP48-202ENST00000374730 SLC22A25Q6T423 547 aa4.17□□□□□ -1.74
USP48-202ENST00000374730 FAM198BQ6UWH4 519 aa4.17□□□□□ -1.74
USP48-202ENST00000374730 ARSKQ6UWY0 536 aa4.17□□□□□ -1.74
USP48-202ENST00000374730 Q6ZTK2 550 aa4.17□□□□□ -1.74
USP48-202ENST00000374730 SLC36A1Q7Z2H8 476 aa4.17□□□□□ -1.74
USP48-202ENST00000374730 DCXRQ7Z4W1 244 aa4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms