RNA–Protein interactions for RNA: ENST00000374487.6

HMGCL-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2

Gene HMGCL, Length 2,151 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-202ENST00000374487 CPT1CQ8TCG5 803 aa10.57□□□□□ -0.72
HMGCL-202ENST00000374487 ALKBH3Q96Q83 286 aaPredicted RBP10.57□□□□□ -0.72
HMGCL-202ENST00000374487 FXYD6Q9H0Q3 95 aa10.57□□□□□ -0.72
HMGCL-202ENST00000374487 ELL3Q9HB65 397 aaPredicted RBP10.57□□□□□ -0.72
HMGCL-202ENST00000374487 GHRLQ9UBU3 117 aa10.57□□□□□ -0.72
HMGCL-202ENST00000374487 V9GYS6 101 aa10.57□□□□□ -0.72
HMGCL-202ENST00000374487 CNTRLQ7Z7A1 2325 aa10.57□□□□□ -0.72
HMGCL-202ENST00000374487 A0A0A6YYD4 124 aa10.56□□□□□ -0.72
HMGCL-202ENST00000374487 PINLYPA6NC86 204 aa10.56□□□□□ -0.72
HMGCL-202ENST00000374487 MCRIP1C9JLW8 97 aa10.56□□□□□ -0.72
HMGCL-202ENST00000374487 SSX5O60225 188 aa10.56□□□□□ -0.72
HMGCL-202ENST00000374487 PMP2P02689 132 aa10.56□□□□□ -0.72
HMGCL-202ENST00000374487 CST2P09228 141 aa10.56□□□□□ -0.72
HMGCL-202ENST00000374487 B4GALT1P15291 398 aa10.56□□□□□ -0.72
HMGCL-202ENST00000374487 CD96P40200 585 aa10.56□□□□□ -0.72
HMGCL-202ENST00000374487 CCL11P51671 97 aa10.56□□□□□ -0.72
HMGCL-202ENST00000374487 SCRN3Q0VDG4 424 aa10.56□□□□□ -0.72
HMGCL-202ENST00000374487 DHRS2Q13268 280 aa10.56□□□□□ -0.72
HMGCL-202ENST00000374487 PLAC9Q5JTB6 97 aa10.56□□□□□ -0.72
HMGCL-202ENST00000374487 ZNF774Q6NX45 483 aa10.56□□□□□ -0.72
HMGCL-202ENST00000374487 DRAM2Q6UX65 266 aa10.56□□□□□ -0.72
HMGCL-202ENST00000374487 CCDC54Q8NEL0 328 aa10.56□□□□□ -0.72
HMGCL-202ENST00000374487 ASB13Q8WXK3 278 aa10.56□□□□□ -0.72
HMGCL-202ENST00000374487 CPNE4Q96A23 557 aaPredicted RBP10.56□□□□□ -0.72
HMGCL-202ENST00000374487 C10orf35Q96D05 121 aa10.56□□□□□ -0.72
HMGCL-202ENST00000374487 CHST5Q9GZS9 411 aa10.56□□□□□ -0.72
HMGCL-202ENST00000374487 ZNF71Q9NQZ8 489 aaPredicted RBP10.56□□□□□ -0.72
HMGCL-202ENST00000374487 TMEM38BQ9NVV0 291 aa10.56□□□□□ -0.72
HMGCL-202ENST00000374487 ABI3Q9P2A4 366 aa10.56□□□□□ -0.72
HMGCL-202ENST00000374487 VSIG4Q9Y279 399 aa10.56□□□□□ -0.72
HMGCL-202ENST00000374487 NOP16Q9Y3C1 178 aaKnown RBP10.56□□□□□ -0.72
HMGCL-202ENST00000374487 PDGFAP04085 211 aa10.56□□□□□ -0.72
HMGCL-202ENST00000374487 MPZP25189 248 aa10.56□□□□□ -0.72
HMGCL-202ENST00000374487 CD34P28906 385 aa10.56□□□□□ -0.72
HMGCL-202ENST00000374487 OR3A3P47888 321 aa10.56□□□□□ -0.72
HMGCL-202ENST00000374487 CLDN15P56746 228 aa10.56□□□□□ -0.72
HMGCL-202ENST00000374487 ARFRP1Q13795 201 aa10.56□□□□□ -0.72
HMGCL-202ENST00000374487 SNAI3Q3KNW1 292 aa10.56□□□□□ -0.72
HMGCL-202ENST00000374487 JMJD6Q6NYC1 403 aaPredicted RBP10.56□□□□□ -0.72
HMGCL-202ENST00000374487 RTN4RL2Q86UN3 420 aa10.56□□□□□ -0.72
HMGCL-202ENST00000374487 ZDHHC22Q8N966 263 aa10.56□□□□□ -0.72
HMGCL-202ENST00000374487 STEAP2Q8NFT2 490 aa10.56□□□□□ -0.72
HMGCL-202ENST00000374487 SEMA6DQ8NFY4 1073 aa10.56□□□□□ -0.72
HMGCL-202ENST00000374487 OR1F12Q8NHA8 337 aa10.56□□□□□ -0.72
HMGCL-202ENST00000374487 SSC4DQ8WTU2 575 aa10.56□□□□□ -0.72
HMGCL-202ENST00000374487 SGK3Q96BR1 496 aa10.56□□□□□ -0.72
HMGCL-202ENST00000374487 ARHGAP5-AS1Q96IT6 56 aa10.56□□□□□ -0.72
HMGCL-202ENST00000374487 ADGRG7Q96K78 797 aa10.56□□□□□ -0.72
HMGCL-202ENST00000374487 FAM173AQ9BQD7 235 aa10.56□□□□□ -0.72
HMGCL-202ENST00000374487 B4GALT7Q9UBV7 327 aa10.56□□□□□ -0.72
HMGCL-202ENST00000374487 HMSDA8MTL9 139 aa10.55□□□□□ -0.72
HMGCL-202ENST00000374487 LCATP04180 440 aa10.55□□□□□ -0.72
HMGCL-202ENST00000374487 ZNF24P17028 368 aa10.55□□□□□ -0.72
HMGCL-202ENST00000374487 SERPINA2P20848 420 aa10.55□□□□□ -0.72
HMGCL-202ENST00000374487 ITGA3P26006 1051 aa10.55□□□□□ -0.72
HMGCL-202ENST00000374487 RFC3P40938 356 aa10.55□□□□□ -0.72
HMGCL-202ENST00000374487 GFRA1P56159 465 aa10.55□□□□□ -0.72
HMGCL-202ENST00000374487 TMEM50BP56557 158 aa10.55□□□□□ -0.72
HMGCL-202ENST00000374487 FOXO1Q12778 655 aa10.55□□□□□ -0.72
HMGCL-202ENST00000374487 PNLIPRP3Q17RR3 467 aa10.55□□□□□ -0.72
HMGCL-202ENST00000374487 SLC25A42Q86VD7 318 aa10.55□□□□□ -0.72
HMGCL-202ENST00000374487 ABHD3Q8WU67 409 aa10.55□□□□□ -0.72
HMGCL-202ENST00000374487 PIGTQ969N2 578 aa10.55□□□□□ -0.72
HMGCL-202ENST00000374487 ZNF845Q96IR2 970 aaPredicted RBP10.55□□□□□ -0.72
HMGCL-202ENST00000374487 FOXB1Q99853 325 aa10.55□□□□□ -0.72
HMGCL-202ENST00000374487 ZNF224Q9NZL3 707 aa10.55□□□□□ -0.72
HMGCL-202ENST00000374487 TIMM10BQ9Y5J6 103 aa10.55□□□□□ -0.72
HMGCL-202ENST00000374487 LINC01387J3KSC0 135 aa10.55□□□□□ -0.72
HMGCL-202ENST00000374487 SYNGR3O43761 229 aa10.55□□□□□ -0.72
HMGCL-202ENST00000374487 C1QL1O75973 258 aa10.55□□□□□ -0.72
HMGCL-202ENST00000374487 CFDP00746 253 aaPredicted RBP10.55□□□□□ -0.72
HMGCL-202ENST00000374487 PATE4P0C8F1 98 aa10.55□□□□□ -0.72
HMGCL-202ENST00000374487 MGMTP16455 207 aa10.55□□□□□ -0.72
HMGCL-202ENST00000374487 ZNF32P17041 273 aa10.55□□□□□ -0.72
HMGCL-202ENST00000374487 AKR1C4P17516 323 aa10.55□□□□□ -0.72
HMGCL-202ENST00000374487 S100A11P31949 105 aa10.55□□□□□ -0.72
HMGCL-202ENST00000374487 HTR5AP47898 357 aa10.55□□□□□ -0.72
HMGCL-202ENST00000374487 PCBD1P61457 104 aa10.55□□□□□ -0.72
HMGCL-202ENST00000374487 RPS27AP62979 156 aaKnown RBP10.55□□□□□ -0.72
HMGCL-202ENST00000374487 IL13RA1P78552 427 aa10.55□□□□□ -0.72
HMGCL-202ENST00000374487 SORDQ00796 357 aa10.55□□□□□ -0.72
HMGCL-202ENST00000374487 SRYQ05066 204 aa10.55□□□□□ -0.72
HMGCL-202ENST00000374487 CEACAM16Q2WEN9 425 aa10.55□□□□□ -0.72
HMGCL-202ENST00000374487 SFRP5Q5T4F7 317 aa10.55□□□□□ -0.72
HMGCL-202ENST00000374487 ABLIM2Q6H8Q1 611 aa10.55□□□□□ -0.72
HMGCL-202ENST00000374487 THOC7Q6I9Y2 204 aaKnown RBP10.55□□□□□ -0.72
HMGCL-202ENST00000374487 C3P1Q6ZMU1 363 aa10.55□□□□□ -0.72
HMGCL-202ENST00000374487 SLC16A14Q7RTX9 510 aa10.55□□□□□ -0.72
HMGCL-202ENST00000374487 GALNTL5Q7Z4T8 443 aa10.55□□□□□ -0.72
HMGCL-202ENST00000374487 C1QL2Q7Z5L3 287 aa10.55□□□□□ -0.72
HMGCL-202ENST00000374487 OR2M7Q8NG81 312 aa10.55□□□□□ -0.72
HMGCL-202ENST00000374487 OR2AE1Q8NHA4 323 aa10.55□□□□□ -0.72
HMGCL-202ENST00000374487 HAS2Q92819 552 aa10.55□□□□□ -0.72
HMGCL-202ENST00000374487 ABHD17AQ96GS6 310 aa10.55□□□□□ -0.72
HMGCL-202ENST00000374487 REEP6Q96HR9 211 aa10.55□□□□□ -0.72
HMGCL-202ENST00000374487 PDCD10Q9BUL8 212 aa10.55□□□□□ -0.72
HMGCL-202ENST00000374487 KCNN3Q9UGI6 736 aa10.55□□□□□ -0.72
HMGCL-202ENST00000374487 MED13Q9UHV7 2174 aa10.54□□□□□ -0.72
HMGCL-202ENST00000374487 OR2AT4A6NND4 320 aa10.54□□□□□ -0.72
HMGCL-202ENST00000374487 CYTIPO60759 359 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms